RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 MMP16P51512 607 aa16.06■□□□□ 0.16
CLIP2-206ENST00000487091 PPP1R8Q12972 351 aaKnown RBP16.06■□□□□ 0.16
CLIP2-206ENST00000487091 MALLQ13021 153 aa16.06■□□□□ 0.16
CLIP2-206ENST00000487091 GK3PQ14409 553 aa16.06■□□□□ 0.16
CLIP2-206ENST00000487091 GK2Q14410 553 aaPredicted RBP16.06■□□□□ 0.16
CLIP2-206ENST00000487091 ZMYND11Q15326 602 aa16.06■□□□□ 0.16
CLIP2-206ENST00000487091 ZNF181Q2M3W8 571 aa16.06■□□□□ 0.16
CLIP2-206ENST00000487091 USP43Q70EL4 1123 aa16.06■□□□□ 0.16
CLIP2-206ENST00000487091 NAA40Q86UY6 237 aa16.06■□□□□ 0.16
CLIP2-206ENST00000487091 MUC20Q8N307 709 aaPredicted RBP16.06■□□□□ 0.16
CLIP2-206ENST00000487091 SEMA6DQ8NFY4 1073 aa16.06■□□□□ 0.16
CLIP2-206ENST00000487091 OR10AD1Q8NGE0 317 aa16.06■□□□□ 0.16
CLIP2-206ENST00000487091 SPTSSAQ969W0 71 aa16.06■□□□□ 0.16
CLIP2-206ENST00000487091 ASB9Q96DX5 294 aa16.06■□□□□ 0.16
CLIP2-206ENST00000487091 WDR76Q9H967 626 aa16.06■□□□□ 0.16
CLIP2-206ENST00000487091 DDX28Q9NUL7 540 aaKnown RBP16.06■□□□□ 0.16
CLIP2-206ENST00000487091 VNN3Q9NY84 501 aa16.06■□□□□ 0.16
CLIP2-206ENST00000487091 F5H0A9 414 aaPredicted RBP16.05■□□□□ 0.16
CLIP2-206ENST00000487091 H0YL77 283 aa16.05■□□□□ 0.16
CLIP2-206ENST00000487091 M0R135 149 aa16.05■□□□□ 0.16
CLIP2-206ENST00000487091 FSTL3O95633 263 aa16.05■□□□□ 0.16
CLIP2-206ENST00000487091 RAP2AP10114 183 aa16.05■□□□□ 0.16
CLIP2-206ENST00000487091 RBMXP38159 391 aaKnown RBP16.05■□□□□ 0.16
CLIP2-206ENST00000487091 SLC25A1P53007 311 aa16.05■□□□□ 0.16
CLIP2-206ENST00000487091 CD300LDQ6UXZ3 194 aa16.05■□□□□ 0.16
CLIP2-206ENST00000487091 BHLHE23Q8NDY6 225 aa16.05■□□□□ 0.16
CLIP2-206ENST00000487091 OR2T33Q8NG76 320 aa16.05■□□□□ 0.16
CLIP2-206ENST00000487091 OR10S1Q8NGN2 331 aa16.05■□□□□ 0.16
CLIP2-206ENST00000487091 ZNRF4Q8WWF5 429 aa16.05■□□□□ 0.16
CLIP2-206ENST00000487091 ZNF799Q96GE5 643 aa16.05■□□□□ 0.16
CLIP2-206ENST00000487091 LRGUKQ96M69 825 aa16.05■□□□□ 0.16
CLIP2-206ENST00000487091 RBM4Q9BWF3 364 aaKnown RBP16.05■□□□□ 0.16
CLIP2-206ENST00000487091 NMNAT2Q9BZQ4 307 aa16.05■□□□□ 0.16
CLIP2-206ENST00000487091 TAS2R1Q9NYW7 299 aa16.05■□□□□ 0.16
CLIP2-206ENST00000487091 OPN4Q9UHM6 478 aa16.05■□□□□ 0.16
CLIP2-206ENST00000487091 U3KQV3 271 aa16.05■□□□□ 0.16
CLIP2-206ENST00000487091 TVP23AA6NH52 213 aa16.04■□□□□ 0.16
CLIP2-206ENST00000487091 A8MXK9 166 aa16.04■□□□□ 0.16
CLIP2-206ENST00000487091 FMO3P31513 532 aa16.04■□□□□ 0.16
CLIP2-206ENST00000487091 OTX1P32242 354 aaPredicted RBP16.04■□□□□ 0.16
CLIP2-206ENST00000487091 CRMP1Q14194 572 aa16.04■□□□□ 0.16
CLIP2-206ENST00000487091 PCK2Q16822 640 aa16.04■□□□□ 0.16
CLIP2-206ENST00000487091 TEX30Q5JUR7 227 aa16.04■□□□□ 0.16
CLIP2-206ENST00000487091 DRAM2Q6UX65 266 aa16.04■□□□□ 0.16
CLIP2-206ENST00000487091 PGAP1Q75T13 922 aa16.04■□□□□ 0.16
CLIP2-206ENST00000487091 CELF2-AS1Q8N7Q2 184 aa16.04■□□□□ 0.16
CLIP2-206ENST00000487091 OR4Q3Q8NH05 313 aa16.04■□□□□ 0.16
CLIP2-206ENST00000487091 ZNF420Q8TAQ5 688 aaPredicted RBP16.04■□□□□ 0.16
CLIP2-206ENST00000487091 SLCO4A1Q96BD0 722 aa16.04■□□□□ 0.16
CLIP2-206ENST00000487091 COMMD3-BMI1R4GMX3 469 aa16.04■□□□□ 0.16
CLIP2-206ENST00000487091 DOCK11Q5JSL3 2073 aa16.04■□□□□ 0.16
CLIP2-206ENST00000487091 F5H5P2 479 aa16.03■□□□□ 0.16
CLIP2-206ENST00000487091 ACOT8O14734 319 aa16.03■□□□□ 0.16
CLIP2-206ENST00000487091 FSHBP01225 129 aa16.03■□□□□ 0.16
CLIP2-206ENST00000487091 IFNGP01579 166 aa16.03■□□□□ 0.16
CLIP2-206ENST00000487091 RPS27P42677 84 aaKnown RBP16.03■□□□□ 0.16
CLIP2-206ENST00000487091 GATA4P43694 442 aa16.03■□□□□ 0.16
CLIP2-206ENST00000487091 ENTPD1P49961 510 aa16.03■□□□□ 0.16
CLIP2-206ENST00000487091 BLVRAP53004 296 aa16.03■□□□□ 0.16
CLIP2-206ENST00000487091 HILS1P60008 231 aa16.03■□□□□ 0.16
CLIP2-206ENST00000487091 DCXRQ7Z4W1 244 aa16.03■□□□□ 0.16
CLIP2-206ENST00000487091 C1orf87Q8N0U7 546 aa16.03■□□□□ 0.16
CLIP2-206ENST00000487091 OR10G2Q8NGC3 310 aa16.03■□□□□ 0.16
CLIP2-206ENST00000487091 OR51L1Q8NGJ5 315 aa16.03■□□□□ 0.16
CLIP2-206ENST00000487091 OR9Q1Q8NGQ5 310 aa16.03■□□□□ 0.16
CLIP2-206ENST00000487091 ERGIC1Q969X5 290 aa16.03■□□□□ 0.16
CLIP2-206ENST00000487091 SLC22A4Q9H015 551 aa16.03■□□□□ 0.16
CLIP2-206ENST00000487091 TMEM165Q9HC07 324 aa16.03■□□□□ 0.16
CLIP2-206ENST00000487091 ARMC1Q9NVT9 282 aa16.03■□□□□ 0.16
CLIP2-206ENST00000487091 LRCH1Q9Y2L9 728 aa16.03■□□□□ 0.16
CLIP2-206ENST00000487091 NOP16Q9Y3C1 178 aaKnown RBP16.03■□□□□ 0.16
CLIP2-206ENST00000487091 LRRC30A6NM36 301 aa16.02■□□□□ 0.16
CLIP2-206ENST00000487091 CEACAM18A8MTB9 384 aa16.02■□□□□ 0.16
CLIP2-206ENST00000487091 ZNF593O00488 134 aaPredicted RBP16.02■□□□□ 0.16
CLIP2-206ENST00000487091 SOX14O95416 240 aa16.02■□□□□ 0.16
CLIP2-206ENST00000487091 HLA-DPB1P04440 258 aa16.02■□□□□ 0.16
CLIP2-206ENST00000487091 WNT2P09544 360 aa16.02■□□□□ 0.16
CLIP2-206ENST00000487091 ZNF12P17014 697 aa16.02■□□□□ 0.16
CLIP2-206ENST00000487091 SPI1P17947 270 aa16.02■□□□□ 0.16
CLIP2-206ENST00000487091 ADRA2CP18825 462 aa16.02■□□□□ 0.16
CLIP2-206ENST00000487091 CD200P41217 278 aa16.02■□□□□ 0.16
CLIP2-206ENST00000487091 ESCO2Q56NI9 601 aa16.02■□□□□ 0.16
CLIP2-206ENST00000487091 LYPD4Q6UWN0 246 aa16.02■□□□□ 0.16
CLIP2-206ENST00000487091 MRPL21Q7Z2W9 205 aaKnown RBP16.02■□□□□ 0.16
CLIP2-206ENST00000487091 MOGAT3Q86VF5 341 aa16.02■□□□□ 0.16
CLIP2-206ENST00000487091 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.02■□□□□ 0.16
CLIP2-206ENST00000487091 ZNF511Q8NB15 262 aa16.02■□□□□ 0.16
CLIP2-206ENST00000487091 DEFB108BQ8NET1 73 aa16.02■□□□□ 0.16
CLIP2-206ENST00000487091 SPRYD4Q8WW59 207 aaPredicted RBP16.02■□□□□ 0.16
CLIP2-206ENST00000487091 CCDC124Q96CT7 223 aaKnown RBP16.02■□□□□ 0.16
CLIP2-206ENST00000487091 JMJD8Q96S16 334 aa16.02■□□□□ 0.16
CLIP2-206ENST00000487091 CHID1Q9BWS9 393 aa16.02■□□□□ 0.16
CLIP2-206ENST00000487091 SUCNR1Q9BXA5 334 aa16.02■□□□□ 0.16
CLIP2-206ENST00000487091 MMP26Q9NRE1 261 aa16.02■□□□□ 0.16
CLIP2-206ENST00000487091 CMC2Q9NRP2 79 aa16.02■□□□□ 0.16
CLIP2-206ENST00000487091 ARRDC5A6NEK1 342 aa16.01■□□□□ 0.15
CLIP2-206ENST00000487091 AQP12BA6NM10 295 aa16.01■□□□□ 0.15
CLIP2-206ENST00000487091 RIIAD1A6NNX1 92 aa16.01■□□□□ 0.15
CLIP2-206ENST00000487091 CD300LBA8K4G0 201 aa16.01■□□□□ 0.15
CLIP2-206ENST00000487091 TRAPPC2LH3BP13 241 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms