RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 TSLPQ969D9 159 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 CDC6Q99741 560 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 OR11A1Q9GZK7 315 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 H0YIZ8 118 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 SOX1O00570 391 aaPredicted RBP10.88□□□□□ -0.67
COL3A1-206ENST00000487010 AHSA1O95433 338 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 H2BFMP0C1H6 154 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 GNALP38405 381 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 NR0B1P51843 470 aaKnown RBP10.88□□□□□ -0.67
COL3A1-206ENST00000487010 B2MP61769 119 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 DCAF7P61962 342 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 FMODQ06828 376 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 MST1LQ2TV78 715 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 ZNF528Q3MIS6 628 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 TMPPEQ6ZT21 453 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.88□□□□□ -0.67
COL3A1-206ENST00000487010 KDM8Q8N371 416 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 OR1M1Q8NGA1 313 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 OR10R2Q8NGX6 335 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 OR4K15Q8NH41 348 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 ZC3H10Q96K80 434 aaKnown RBP10.88□□□□□ -0.67
COL3A1-206ENST00000487010 NUDT16L1Q9BRJ7 211 aaKnown RBP10.88□□□□□ -0.67
COL3A1-206ENST00000487010 UQCC2Q9BRT2 126 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 SEC11CQ9BY50 192 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 MTIF3Q9H2K0 278 aaKnown RBP10.88□□□□□ -0.67
COL3A1-206ENST00000487010 ZNF768Q9H5H4 540 aaKnown RBP10.88□□□□□ -0.67
COL3A1-206ENST00000487010 ESRP2Q9H6T0 727 aaKnown RBP10.88□□□□□ -0.67
COL3A1-206ENST00000487010 PTGES2Q9H7Z7 377 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 TREM1Q9NP99 234 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 CENPMQ9NSP4 180 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 MMACHCQ9Y4U1 282 aa10.88□□□□□ -0.67
COL3A1-206ENST00000487010 A6NIZ1 184 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 F12P00748 615 aaPredicted RBP10.87□□□□□ -0.67
COL3A1-206ENST00000487010 IGHV4-34P06331 123 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 CAPZBP47756 277 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 NPBWR1P48145 328 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 MMP16P51512 607 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 RAP1BP61224 184 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 RAP1AP62834 184 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 TDGQ13569 410 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 EBPQ15125 230 aaKnown RBP10.87□□□□□ -0.67
COL3A1-206ENST00000487010 TMEM128Q5BJH2 165 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 DNM1P34Q6PK57 102 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 IL34Q6ZMJ4 242 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 GRINAQ7Z429 371 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 RTN4RL2Q86UN3 420 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 C9orf40Q8IXQ3 194 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 ZNF248Q8NDW4 579 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 TERB2Q8NHR7 220 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 GPR119Q8TDV5 335 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 ADAT3Q96EY9 351 aaPredicted RBP10.87□□□□□ -0.67
COL3A1-206ENST00000487010 C12orf57Q99622 126 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 BIN3Q9NQY0 253 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 UQCC1Q9NVA1 299 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 FAM206AQ9NX38 181 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 COA4Q9NYJ1 87 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 FBLN5Q9UBX5 448 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 F5P12259 2224 aa10.87□□□□□ -0.67
COL3A1-206ENST00000487010 THADAQ6YHU6 1953 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 IGKV3D-11A0A0A0MRZ8 115 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 TCRBV21S2A2A0A5A6 115 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 PQLC2LA1A4F0 135 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 TMEM14DPA8MWL7 114 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 C10orf142B7Z368 130 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 FTCDNL1E5RQL4 147 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 MS4A18H0YCH9 400 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 TO15178 435 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 OR2T1O43869 369 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 ZNF217O75362 1048 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 TTRP02766 147 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 THEGLP0DJG4 465 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 IL11P20809 199 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 CBX5P45973 191 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 SLC6A9P48067 706 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 PLCXD2Q0VAA5 305 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 PJVKQ0ZLH3 352 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 SGCAQ16586 387 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 MS4A18Q3C1V0 323 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.86□□□□□ -0.67
COL3A1-206ENST00000487010 HLA-DQA1Q5Y7H0 255 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 PTCRAQ6ISU1 281 aaPredicted RBP10.86□□□□□ -0.67
COL3A1-206ENST00000487010 DRAM2Q6UX65 266 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 RNF133Q8WVZ7 376 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 ASB10Q8WXI3 467 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 TMEM231Q9H6L2 316 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 ZFP57Q9NU63 452 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 SOHLH2Q9NX45 425 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 SLC5A6Q9Y289 635 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 KIAA0100Q14667 2235 aaKnown RBP10.86□□□□□ -0.67
COL3A1-206ENST00000487010 IGKV1D-43A0A0B4J1Z2 117 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 SYT7O43581 403 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 LYL1P12980 280 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 GABRG2P18507 467 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 OR1D4P47884 311 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 MRPS21P82921 87 aaKnown RBP10.86□□□□□ -0.67
COL3A1-206ENST00000487010 ANGPTL5Q86XS5 388 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 WDFY1Q8IWB7 410 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 OR5D14Q8NGL3 314 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 OR2I1PQ8NGU4 316 aa10.86□□□□□ -0.67
COL3A1-206ENST00000487010 ROBO4Q8WZ75 1007 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms