RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 TMEM106BQ9NUM4 274 aa14.93□□□□□ -0.02
COL6A1-204ENST00000486023 IL19Q9UHD0 177 aa14.93□□□□□ -0.02
COL6A1-204ENST00000486023 POMPQ9Y244 141 aa14.93□□□□□ -0.02
COL6A1-204ENST00000486023 NPTNQ9Y639 398 aa14.93□□□□□ -0.02
COL6A1-204ENST00000486023 MXRA5Q9NR99 2828 aa14.93□□□□□ -0.02
COL6A1-204ENST00000486023 DNHD1Q96M86 4753 aa14.92□□□□□ -0.02
COL6A1-204ENST00000486023 M0R135 149 aa14.92□□□□□ -0.02
COL6A1-204ENST00000486023 PLPP2O43688 288 aa14.92□□□□□ -0.02
COL6A1-204ENST00000486023 ZNF205O95201 554 aa14.92□□□□□ -0.02
COL6A1-204ENST00000486023 HLA-DPB1P04440 258 aa14.92□□□□□ -0.02
COL6A1-204ENST00000486023 PSKH1P11801 424 aa14.92□□□□□ -0.02
COL6A1-204ENST00000486023 ENTPD1P49961 510 aa14.92□□□□□ -0.02
COL6A1-204ENST00000486023 GK2Q14410 553 aaPredicted RBP14.92□□□□□ -0.02
COL6A1-204ENST00000486023 GINS1Q14691 196 aa14.92□□□□□ -0.02
COL6A1-204ENST00000486023 SHQ1Q6PI26 577 aaKnown RBP14.92□□□□□ -0.02
COL6A1-204ENST00000486023 PGAP1Q75T13 922 aa14.92□□□□□ -0.02
COL6A1-204ENST00000486023 ZNF283Q8N7M2 679 aa14.92□□□□□ -0.02
COL6A1-204ENST00000486023 ZNF420Q8TAQ5 688 aaPredicted RBP14.92□□□□□ -0.02
COL6A1-204ENST00000486023 SPRYD4Q8WW59 207 aaPredicted RBP14.92□□□□□ -0.02
COL6A1-204ENST00000486023 ZNF799Q96GE5 643 aa14.92□□□□□ -0.02
COL6A1-204ENST00000486023 C1QTNF5Q9BXJ0 243 aa14.92□□□□□ -0.02
COL6A1-204ENST00000486023 YY1AP1Q9H869 796 aa14.92□□□□□ -0.02
COL6A1-204ENST00000486023 TMEM100Q9NV29 134 aa14.92□□□□□ -0.02
COL6A1-204ENST00000486023 KCNG2Q9UJ96 466 aa14.92□□□□□ -0.02
COL6A1-204ENST00000486023 COMMD3-BMI1R4GMX3 469 aa14.92□□□□□ -0.02
COL6A1-204ENST00000486023 F5H5P2 479 aa14.91□□□□□ -0.02
COL6A1-204ENST00000486023 J3QW42 95 aa14.91□□□□□ -0.02
COL6A1-204ENST00000486023 GSC2O15499 205 aa14.91□□□□□ -0.02
COL6A1-204ENST00000486023 FKBP6O75344 327 aa14.91□□□□□ -0.02
COL6A1-204ENST00000486023 IGHV2-5P01817 119 aa14.91□□□□□ -0.02
COL6A1-204ENST00000486023 SLC2A1P11166 492 aa14.91□□□□□ -0.02
COL6A1-204ENST00000486023 SLC25A1P53007 311 aa14.91□□□□□ -0.02
COL6A1-204ENST00000486023 LCN2P80188 198 aa14.91□□□□□ -0.02
COL6A1-204ENST00000486023 SLC27A4Q6P1M0 643 aa14.91□□□□□ -0.02
COL6A1-204ENST00000486023 MRPL21Q7Z2W9 205 aaKnown RBP14.91□□□□□ -0.02
COL6A1-204ENST00000486023 ERI1Q8IV48 349 aaKnown RBP14.91□□□□□ -0.02
COL6A1-204ENST00000486023 OR10S1Q8NGN2 331 aa14.91□□□□□ -0.02
COL6A1-204ENST00000486023 ST7LQ8TDW4 575 aa14.91□□□□□ -0.02
COL6A1-204ENST00000486023 TMEM158Q8WZ71 300 aa14.91□□□□□ -0.02
COL6A1-204ENST00000486023 SLAMF6Q96DU3 332 aa14.91□□□□□ -0.02
COL6A1-204ENST00000486023 OCEL1Q9H607 264 aa14.91□□□□□ -0.02
COL6A1-204ENST00000486023 METTL17Q9H7H0 456 aaPredicted RBP14.91□□□□□ -0.02
COL6A1-204ENST00000486023 CMC2Q9NRP2 79 aa14.91□□□□□ -0.02
COL6A1-204ENST00000486023 TRAV20A0A0B4J274 112 aa14.9□□□□□ -0.02
COL6A1-204ENST00000486023 CYB5R3P00387 301 aaPredicted RBP14.9□□□□□ -0.02
COL6A1-204ENST00000486023 SELEP16581 610 aa14.9□□□□□ -0.02
COL6A1-204ENST00000486023 GRK5P34947 590 aa14.9□□□□□ -0.02
COL6A1-204ENST00000486023 SRP9P49458 86 aaKnown RBP14.9□□□□□ -0.02
COL6A1-204ENST00000486023 EIF2B1Q14232 305 aaKnown RBP14.9□□□□□ -0.02
COL6A1-204ENST00000486023 SNAI3Q3KNW1 292 aa14.9□□□□□ -0.02
COL6A1-204ENST00000486023 KRTAP27-1Q3LI81 207 aa14.9□□□□□ -0.02
COL6A1-204ENST00000486023 KLHL12Q53G59 568 aa14.9□□□□□ -0.02
COL6A1-204ENST00000486023 CD300LDQ6UXZ3 194 aa14.9□□□□□ -0.02
COL6A1-204ENST00000486023 COLCA1Q6ZS62 124 aa14.9□□□□□ -0.02
COL6A1-204ENST00000486023 MOGAT3Q86VF5 341 aa14.9□□□□□ -0.02
COL6A1-204ENST00000486023 OR6N2Q8NGY6 317 aa14.9□□□□□ -0.02
COL6A1-204ENST00000486023 OR2AE1Q8NHA4 323 aa14.9□□□□□ -0.02
COL6A1-204ENST00000486023 MEGF10Q96KG7 1140 aa14.9□□□□□ -0.02
COL6A1-204ENST00000486023 CADM1Q9BY67 442 aaKnown RBP14.9□□□□□ -0.02
COL6A1-204ENST00000486023 NMNAT2Q9BZQ4 307 aa14.9□□□□□ -0.02
COL6A1-204ENST00000486023 GCM1Q9NP62 436 aa14.9□□□□□ -0.02
COL6A1-204ENST00000486023 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.89□□□□□ -0.03
COL6A1-204ENST00000486023 C5orf63A6NC05 138 aa14.89□□□□□ -0.03
COL6A1-204ENST00000486023 GGT3PA6NGU5 568 aa14.89□□□□□ -0.03
COL6A1-204ENST00000486023 IQCF6A8MYZ5 107 aa14.89□□□□□ -0.03
COL6A1-204ENST00000486023 MLNRO43193 412 aa14.89□□□□□ -0.03
COL6A1-204ENST00000486023 TBX1O43435 398 aa14.89□□□□□ -0.03
COL6A1-204ENST00000486023 DEAF1O75398 565 aaPredicted RBP14.89□□□□□ -0.03
COL6A1-204ENST00000486023 TIPRLO75663 272 aa14.89□□□□□ -0.03
COL6A1-204ENST00000486023 RGS9O75916 674 aaPredicted RBP14.89□□□□□ -0.03
COL6A1-204ENST00000486023 PNPP00491 289 aa14.89□□□□□ -0.03
COL6A1-204ENST00000486023 PAICSP22234 425 aaKnown RBP14.89□□□□□ -0.03
COL6A1-204ENST00000486023 GSTT1P30711 240 aa14.89□□□□□ -0.03
COL6A1-204ENST00000486023 GK3PQ14409 553 aa14.89□□□□□ -0.03
COL6A1-204ENST00000486023 TMEM236Q5W0B7 351 aa14.89□□□□□ -0.03
COL6A1-204ENST00000486023 PLBD1Q6P4A8 553 aa14.89□□□□□ -0.03
COL6A1-204ENST00000486023 DPY19L4Q7Z388 723 aa14.89□□□□□ -0.03
COL6A1-204ENST00000486023 PHC2Q8IXK0 858 aa14.89□□□□□ -0.03
COL6A1-204ENST00000486023 KLHL36Q8N4N3 616 aa14.89□□□□□ -0.03
COL6A1-204ENST00000486023 ZMYND19Q96E35 227 aaPredicted RBP14.89□□□□□ -0.03
COL6A1-204ENST00000486023 SLC30A2Q9BRI3 323 aa14.89□□□□□ -0.03
COL6A1-204ENST00000486023 KIF17Q9P2E2 1029 aa14.89□□□□□ -0.03
COL6A1-204ENST00000486023 DNAJB9Q9UBS3 223 aa14.89□□□□□ -0.03
COL6A1-204ENST00000486023 METRNQ9UJH8 293 aa14.89□□□□□ -0.03
COL6A1-204ENST00000486023 LOC105371242A0A075B767 164 aa14.88□□□□□ -0.03
COL6A1-204ENST00000486023 TCRBV3S1A0A5B6 114 aa14.88□□□□□ -0.03
COL6A1-204ENST00000486023 PRR23D1E9PI22 279 aaPredicted RBP14.88□□□□□ -0.03
COL6A1-204ENST00000486023 IGHV2-70P01814 119 aa14.88□□□□□ -0.03
COL6A1-204ENST00000486023 ANXA2P07355 339 aaKnown RBP14.88□□□□□ -0.03
COL6A1-204ENST00000486023 PRR23D2P0DMB1 279 aaPredicted RBP14.88□□□□□ -0.03
COL6A1-204ENST00000486023 OSMP13725 252 aa14.88□□□□□ -0.03
COL6A1-204ENST00000486023 CA6P23280 308 aa14.88□□□□□ -0.03
COL6A1-204ENST00000486023 ANOS1P23352 680 aa14.88□□□□□ -0.03
COL6A1-204ENST00000486023 HSD11B1P28845 292 aa14.88□□□□□ -0.03
COL6A1-204ENST00000486023 RAD23AP54725 363 aa14.88□□□□□ -0.03
COL6A1-204ENST00000486023 BTG1P62324 171 aa14.88□□□□□ -0.03
COL6A1-204ENST00000486023 ZNF92Q03936 586 aa14.88□□□□□ -0.03
COL6A1-204ENST00000486023 GLYATL3Q5SZD4 288 aa14.88□□□□□ -0.03
COL6A1-204ENST00000486023 DCAF12L2Q5VW00 463 aa14.88□□□□□ -0.03
COL6A1-204ENST00000486023 DRAM2Q6UX65 266 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms