RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 ISPDA4D126 451 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 GGT3PA6NGU5 568 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 SAC3D1A6NKF1 404 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 PRODHO43272 600 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 TBX1O43435 398 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 MITFO75030 526 aaPredicted RBP10.63□□□□□ -0.71
PTCD1-205ENST00000485746 CRLF1O75462 422 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 APOC1P02654 83 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 ANXA2P07355 339 aaKnown RBP10.63□□□□□ -0.71
PTCD1-205ENST00000485746 H2BFMP0C1H6 154 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 RAD23AP54725 363 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 CDH15P55291 814 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 APOFQ13790 326 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 KPNB1Q14974 876 aaKnown RBP10.63□□□□□ -0.71
PTCD1-205ENST00000485746 PTGES3Q15185 160 aaKnown RBP10.63□□□□□ -0.71
PTCD1-205ENST00000485746 RSPO1Q2MKA7 263 aaPredicted RBP10.63□□□□□ -0.71
PTCD1-205ENST00000485746 SLC35D3Q5M8T2 416 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 LINC01590Q5TEZ4 76 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 LCN1P1Q5VSP4 162 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 DRAM2Q6UX65 266 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 LINC01356Q8N9X3 169 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 OR8G5Q8NG78 346 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 OR10S1Q8NGN2 331 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 ITLN1Q8WWA0 313 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 MSI2Q96DH6 328 aaKnown RBP10.63□□□□□ -0.71
PTCD1-205ENST00000485746 CENPNQ96H22 339 aaPredicted RBP10.63□□□□□ -0.71
PTCD1-205ENST00000485746 BEX2Q9BXY8 128 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 DDX28Q9NUL7 540 aaKnown RBP10.63□□□□□ -0.71
PTCD1-205ENST00000485746 TMEM100Q9NV29 134 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 CACNG2Q9Y698 323 aa10.63□□□□□ -0.71
PTCD1-205ENST00000485746 ARFGEF3Q5TH69 2177 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 IQCF6A8MYZ5 107 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 SELENOFO60613 162 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 RP2O75695 350 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 CD55P08174 381 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 ADH4P08319 380 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 SLC2A1P11166 492 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 PSKH1P11801 424 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 IGFBP5P24593 272 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 IL2RGP31785 369 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 NAA10P41227 235 aaPredicted RBP10.62□□□□□ -0.71
PTCD1-205ENST00000485746 CX3CR1P49238 355 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 SRP9P49458 86 aaKnown RBP10.62□□□□□ -0.71
PTCD1-205ENST00000485746 PRSS12P56730 875 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 GK2Q14410 553 aaPredicted RBP10.62□□□□□ -0.71
PTCD1-205ENST00000485746 PCK2Q16822 640 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 KRTAP27-1Q3LI81 207 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 CHRFAM7AQ494W8 412 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 ZFP1Q6P2D0 407 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 Q6ZR03 302 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 COLCA1Q6ZS62 124 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 ZNF771Q7L3S4 317 aaPredicted RBP10.62□□□□□ -0.71
PTCD1-205ENST00000485746 PARP8Q8N3A8 854 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 ZNF454Q8N9F8 522 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 CLDND2Q8NHS1 167 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 RAB3IPQ96QF0 476 aaPredicted RBP10.62□□□□□ -0.71
PTCD1-205ENST00000485746 OR2V2Q96R30 315 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 ABHD6Q9BV23 337 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 SHARPINQ9H0F6 387 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 TOR3AQ9H497 397 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 RIBC2Q9H4K1 309 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 BRD7Q9NPI1 651 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 DNAJC27Q9NZQ0 273 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 IL19Q9UHD0 177 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 LAMP5Q9UJQ1 280 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 ORC6Q9Y5N6 252 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 VPS13CQ709C8 3753 aa10.62□□□□□ -0.71
PTCD1-205ENST00000485746 FLNAP21333 2647 aaKnown RBP10.62□□□□□ -0.71
PTCD1-205ENST00000485746 ACANP16112 2415 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 LYNP07948 512 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 SBK2P0C263 348 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 ANPEPP15144 967 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 HNF1AP20823 631 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 ACTR3P61158 418 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 TIGD6Q17RP2 521 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 SNAI3Q3KNW1 292 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 KDM4DQ6B0I6 523 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 TIGD4Q8IY51 512 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 BBS1Q8NFJ9 593 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 OR10AD1Q8NGE0 317 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 ST7LQ8TDW4 575 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 PGAM5Q96HS1 289 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 GAL3ST1Q99999 423 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 GABARAPL1Q9H0R8 117 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 LPAR2Q9HBW0 351 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 UBAP1Q9NZ09 502 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 LPAR3Q9UBY5 353 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 CDC42EP3Q9UKI2 254 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 OAZ3Q9UMX2 235 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 PCDHB10Q9UN67 800 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 PPP1R3CQ9UQK1 317 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 NOP16Q9Y3C1 178 aaKnown RBP10.61□□□□□ -0.71
PTCD1-205ENST00000485746 WIPI2Q9Y4P8 454 aa10.61□□□□□ -0.71
PTCD1-205ENST00000485746 B4DSR2 109 aa10.6□□□□□ -0.71
PTCD1-205ENST00000485746 H0YL77 283 aa10.6□□□□□ -0.71
PTCD1-205ENST00000485746 WNT9BO14905 357 aa10.6□□□□□ -0.71
PTCD1-205ENST00000485746 XRCC2O43543 280 aa10.6□□□□□ -0.71
PTCD1-205ENST00000485746 MRPL3P09001 348 aaKnown RBP10.6□□□□□ -0.71
PTCD1-205ENST00000485746 ZNF92Q03936 586 aa10.6□□□□□ -0.71
PTCD1-205ENST00000485746 OR8G1Q15617 311 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms