RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 OMGP23515 440 aa10.85□□□□□ -0.67
HDAC6-227ENST00000485102 PSMB10P40306 273 aa10.85□□□□□ -0.67
HDAC6-227ENST00000485102 ERFP50548 548 aa10.85□□□□□ -0.67
HDAC6-227ENST00000485102 HIST1H3AP68431 136 aa10.85□□□□□ -0.67
HDAC6-227ENST00000485102 CCDC92Q53HC0 331 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-227ENST00000485102 HIST2H3PS2Q5TEC6 136 aa10.85□□□□□ -0.67
HDAC6-227ENST00000485102 WDR25Q64LD2 544 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-227ENST00000485102 OLFML2AQ68BL7 652 aa10.85□□□□□ -0.67
HDAC6-227ENST00000485102 ZNF841Q6ZN19 808 aa10.85□□□□□ -0.67
HDAC6-227ENST00000485102 DCDC5Q6ZRR9 648 aa10.85□□□□□ -0.67
HDAC6-227ENST00000485102 COLCA1Q6ZS62 124 aa10.85□□□□□ -0.67
HDAC6-227ENST00000485102 HIST2H3AQ71DI3 136 aa10.85□□□□□ -0.67
HDAC6-227ENST00000485102 JAZF1Q86VZ6 243 aa10.85□□□□□ -0.67
HDAC6-227ENST00000485102 SPATA24Q86W54 205 aa10.85□□□□□ -0.67
HDAC6-227ENST00000485102 OR8B3Q8NGG8 313 aa10.85□□□□□ -0.67
HDAC6-227ENST00000485102 ZNF420Q8TAQ5 688 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-227ENST00000485102 Q8TCH9 128 aa10.85□□□□□ -0.67
HDAC6-227ENST00000485102 ACOT11Q8WXI4 607 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-227ENST00000485102 TAF15Q92804 592 aaKnown RBP eCLIP10.85□□□□□ -0.67
HDAC6-227ENST00000485102 APOBEC3DQ96AK3 386 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-227ENST00000485102 FAM71F1Q96KD3 344 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-227ENST00000485102 ZNF582Q96NG8 517 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-227ENST00000485102 OR8B2Q96RD0 313 aa10.85□□□□□ -0.67
HDAC6-227ENST00000485102 NUDT16L1Q9BRJ7 211 aaKnown RBP10.85□□□□□ -0.67
HDAC6-227ENST00000485102 MMP27Q9H306 513 aa10.85□□□□□ -0.67
HDAC6-227ENST00000485102 PDP1Q9P0J1 537 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-227ENST00000485102 POMT1Q9Y6A1 747 aa10.85□□□□□ -0.67
HDAC6-227ENST00000485102 IGHV3OR16-10A0A075B7F0 116 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 A0A087WUU8 490 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 A0A1W2PRQ8 180 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 CLPSL1A2RUU4 121 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 H7C1C5 153 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 XKRYO14609 159 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 TNFRSF13BO14836 293 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-227ENST00000485102 FFAR1O14842 300 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 TIMM23O14925 209 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 MLNRO43193 412 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 CYB5R3P00387 301 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-227ENST00000485102 CRYBA1P05813 215 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 LIPFP07098 398 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 ZNF26P17031 533 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-227ENST00000485102 FUT4P22083 530 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 PMELP40967 661 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 PITPNBP48739 271 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 NPY4RP50391 375 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 RAG2P55895 527 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 LCN6P62502 163 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 RELBQ01201 579 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 DGCR6Q14129 220 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 ZBED5Q49AG3 693 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 MESTQ5EB52 335 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 GPR157Q5UAW9 335 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 GPR139Q6DWJ6 353 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 OR2T2Q6IF00 324 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 CYP2R1Q6VVX0 501 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 C17orf107Q6ZR85 190 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 MBOAT2Q6ZWT7 520 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 RHOUQ7L0Q8 258 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 ZDHHC21Q8IVQ6 265 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 GLB1L2Q8IW92 636 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 KIR3DL3Q8N743 410 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 SLC7A6Q92536 515 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 ZDHHC16Q969W1 377 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 Q96M85 177 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 NMNAT1Q9HAN9 279 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-227ENST00000485102 C1RLQ9NZP8 487 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 VSX1Q9NZR4 365 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-227ENST00000485102 ASH2LQ9UBL3 628 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 CLN8Q9UBY8 286 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 TMCC3Q9ULS5 477 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 TMEM5Q9Y2B1 443 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 ADAM18Q9Y3Q7 739 aa10.84□□□□□ -0.67
HDAC6-227ENST00000485102 MDFIC2A0A1B0GVS7 189 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 TCRBV3S1A0A5B6 114 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 H0YL77 283 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 M0QZ24 198 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 CDC42EP2O14613 210 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 PTP4A3O75365 173 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 KHDRBS3O75525 346 aaKnown RBP10.83□□□□□ -0.68
HDAC6-227ENST00000485102 ZNF205O95201 554 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 H1F0P07305 194 aaKnown RBP10.83□□□□□ -0.68
HDAC6-227ENST00000485102 SELEP16581 610 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 RRM2P31350 389 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 RPL4P36578 427 aaKnown RBP10.83□□□□□ -0.68
HDAC6-227ENST00000485102 MAGEA2P43356 314 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 FGF12P61328 243 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 HLXQ14774 488 aaPredicted RBP10.83□□□□□ -0.68
HDAC6-227ENST00000485102 PDCD1Q15116 288 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 RSPO1Q2MKA7 263 aaPredicted RBP10.83□□□□□ -0.68
HDAC6-227ENST00000485102 C11orf91Q3C1V1 193 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 KRTAP27-1Q3LI81 207 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 C1orf94Q6P1W5 598 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 FIP1L1Q6UN15 594 aaKnown RBP10.83□□□□□ -0.68
HDAC6-227ENST00000485102 BRD3OSQ6XYD6 125 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 VTCN1Q7Z7D3 282 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 OR5AS1Q8N127 324 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 GJC3Q8NFK1 279 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 OR10AD1Q8NGE0 317 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 OR13C2Q8NGS9 318 aa10.83□□□□□ -0.68
HDAC6-227ENST00000485102 CLPTM1LQ96KA5 538 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms