RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 SMCO1Q147U7 214 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 EXOSC7Q15024 291 aaKnown RBP4.62□□□□□ -1.67
CCDC39-205ENST00000485055 GUK1Q16774 197 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 SAMD4BQ5PRF9 694 aaKnown RBP4.62□□□□□ -1.67
CCDC39-205ENST00000485055 GTF2H2CQ6P1K8 395 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 SCIMPQ6UWF3 145 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 GOLGA7Q7Z5G4 137 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 DOLPP1Q86YN1 238 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 ADAD2Q8NCV1 583 aaKnown RBP4.62□□□□□ -1.67
CCDC39-205ENST00000485055 OR2M7Q8NG81 312 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 RNF133Q8WVZ7 376 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 TMEM239Q8WW34 195 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 MAPKAP1Q9BPZ7 522 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 DEFB126Q9BYW3 111 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 B4GALT7Q9UBV7 327 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 NSG2Q9Y328 171 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 CHCHD2Q9Y6H1 151 aaPredicted RBP4.62□□□□□ -1.67
CCDC39-205ENST00000485055 ZFYVE26Q68DK2 2539 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 MGAQ8IWI9 3026 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 A0A1B0GVG6 124 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 LRRC3CA6NJW4 275 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 GNB5O14775 395 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 TM9SF1O15321 606 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 ERI3O43414 337 aaKnown RBP4.62□□□□□ -1.67
CCDC39-205ENST00000485055 TSPAN2O60636 221 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 AIFM1O95831 613 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 CELA2AP08217 269 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 PAX1P15863 534 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 TPTEP56180 551 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 FFAR4Q5NUL3 377 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 GFRALQ6UXV0 394 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 LARP4Q71RC2 724 aaKnown RBP eCLIP4.62□□□□□ -1.67
CCDC39-205ENST00000485055 NECAP1Q8NC96 275 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 ZPLD1Q8TCW7 415 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 TMEM125Q96AQ2 219 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 ALOXE3Q9BYJ1 711 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 CXorf21Q9HAI6 301 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 ZFP64Q9NPA5 681 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 ASIC5Q9NY37 505 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 SLC17A6Q9P2U8 582 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 WDR83OSQ9Y284 106 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 POLDIP2Q9Y2S7 368 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 KLHDC2Q9Y2U9 406 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 MMP24Q9Y5R2 645 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 A0A096LPK6 155 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 PRSS51A0A1B0GVH4 220 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 F8VVB4 439 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 F8VWA3 439 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 ETV2O00321 342 aaPredicted RBP4.61□□□□□ -1.67
CCDC39-205ENST00000485055 GOSR2O14653 212 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 EFNA2O43921 213 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 CYP7B1O75881 506 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 ALDOBP05062 364 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 SFTPBP07988 381 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 HSD17B3P37058 310 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 HTR5AP47898 357 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 EBPQ15125 230 aaKnown RBP4.61□□□□□ -1.67
CCDC39-205ENST00000485055 NKAPLQ5M9Q1 402 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 FRG2Q64ET8 278 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 ANKRD26P1Q6NSI1 321 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 SLC48A1Q6P1K1 146 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 BAALCQ8WXS3 180 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 IFT81Q8WYA0 676 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 FRG2BQ96QU4 278 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 TTYH2Q9BSA4 534 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 ZNF426Q9BUY5 554 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 RPF2Q9H7B2 306 aaKnown RBP4.61□□□□□ -1.67
CCDC39-205ENST00000485055 ACOXLQ9NUZ1 547 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 LGALS13Q9UHV8 139 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 TIMM10BQ9Y5J6 103 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 A3GALT2U3KPV4 340 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 FRG2CA6NGY1 282 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 NKX6-3A6NJ46 265 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 H0Y980 276 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 ARPC5O15511 151 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 ATP6AP2O75787 350 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 IGHV2-70P01814 119 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 ELK4P28324 431 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 CRABP1P29762 137 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 CHRNB4P30926 498 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 HPCAL1P37235 193 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 PPICP45877 212 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 MEOX1P50221 254 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 GAS1P54826 345 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 TLE4Q04727 773 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 DYNC1I2Q13409 638 aaKnown RBP4.61□□□□□ -1.67
CCDC39-205ENST00000485055 SPIN4Q56A73 249 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 ZNF678Q5SXM1 525 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 SP5Q6BEB4 398 aaPredicted RBP4.61□□□□□ -1.67
CCDC39-205ENST00000485055 CD164L2Q6UWJ8 174 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 FCRLAQ7L513 359 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 C9orf40Q8IXQ3 194 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 MREGQ8N565 214 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 OR11L1Q8NGX0 322 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 BORCS5Q969J3 196 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 TM4SF18Q96CE8 201 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 WFIKKN1Q96NZ8 548 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 ZNF347Q96SE7 839 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 HOXD1Q9GZZ0 328 aa4.61□□□□□ -1.67
CCDC39-205ENST00000485055 ZNF703Q9H7S9 590 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms