RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 SPTSSAQ969W0 71 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 SLAMF6Q96DU3 332 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 ZMYND19Q96E35 227 aaPredicted RBP10.39□□□□□ -0.75
MSH5-216ENST00000484309 TIMD4Q96H15 378 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 C1orf159Q96HA4 380 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 OR2V2Q96R30 315 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 DIRC2Q96SL1 478 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 MDFIQ99750 246 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 COPS4Q9BT78 406 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 OR51V1Q9H2C8 321 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 ZNF665Q9H7R5 613 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 NTN4Q9HB63 628 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 TUBG2Q9NRH3 451 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 UBAP1Q9NZ09 502 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 KIF17Q9P2E2 1029 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 LPAR3Q9UBY5 353 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 B4DSR2 109 aa10.38□□□□□ -0.75
MSH5-216ENST00000484309 F5H5P2 479 aa10.38□□□□□ -0.75
MSH5-216ENST00000484309 MLNRO43193 412 aa10.38□□□□□ -0.75
MSH5-216ENST00000484309 DEAF1O75398 565 aaPredicted RBP10.38□□□□□ -0.75
MSH5-216ENST00000484309 HLA-DPB1P04440 258 aa10.38□□□□□ -0.75
MSH5-216ENST00000484309 ANXA8P13928 327 aa10.38□□□□□ -0.75
MSH5-216ENST00000484309 SELEP16581 610 aa10.38□□□□□ -0.75
MSH5-216ENST00000484309 HOXB6P17509 224 aaKnown RBP10.38□□□□□ -0.75
MSH5-216ENST00000484309 SRD5A1P18405 259 aa10.38□□□□□ -0.75
MSH5-216ENST00000484309 RASSF2P50749 326 aa10.38□□□□□ -0.75
MSH5-216ENST00000484309 EIF2B1Q14232 305 aaKnown RBP10.38□□□□□ -0.75
MSH5-216ENST00000484309 C1orf146Q5VVC0 180 aa10.38□□□□□ -0.75
MSH5-216ENST00000484309 SHQ1Q6PI26 577 aaKnown RBP10.38□□□□□ -0.75
MSH5-216ENST00000484309 DPY19L4Q7Z388 723 aa10.38□□□□□ -0.75
MSH5-216ENST00000484309 GLCCI1Q86VQ1 547 aa10.38□□□□□ -0.75
MSH5-216ENST00000484309 ZNF283Q8N7M2 679 aa10.38□□□□□ -0.75
MSH5-216ENST00000484309 BBS1Q8NFJ9 593 aa10.38□□□□□ -0.75
MSH5-216ENST00000484309 OR8G5Q8NG78 346 aa10.38□□□□□ -0.75
MSH5-216ENST00000484309 ZNF420Q8TAQ5 688 aaPredicted RBP10.38□□□□□ -0.75
MSH5-216ENST00000484309 ST7LQ8TDW4 575 aa10.38□□□□□ -0.75
MSH5-216ENST00000484309 ZNF582Q96NG8 517 aaPredicted RBP10.38□□□□□ -0.75
MSH5-216ENST00000484309 INTS14Q96SY0 518 aa10.38□□□□□ -0.75
MSH5-216ENST00000484309 GAL3ST1Q99999 423 aa10.38□□□□□ -0.75
MSH5-216ENST00000484309 DDX28Q9NUL7 540 aaKnown RBP10.38□□□□□ -0.75
MSH5-216ENST00000484309 TMEM106BQ9NUM4 274 aa10.38□□□□□ -0.75
MSH5-216ENST00000484309 TMEFF2Q9UIK5 374 aaPredicted RBP10.38□□□□□ -0.75
MSH5-216ENST00000484309 SVEP1Q4LDE5 3571 aa10.38□□□□□ -0.75
MSH5-216ENST00000484309 IQCF6A8MYZ5 107 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 ZNF878C9JN71 531 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 PRR23D1E9PI22 279 aaPredicted RBP10.37□□□□□ -0.75
MSH5-216ENST00000484309 SURF4O15260 269 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 SELENOFO60613 162 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 MITFO75030 526 aaPredicted RBP10.37□□□□□ -0.75
MSH5-216ENST00000484309 ATP5HO75947 161 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 GLCEO94923 617 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 IGHV2-5P01817 119 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 MSMBP08118 114 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 PRR23D2P0DMB1 279 aaPredicted RBP10.37□□□□□ -0.75
MSH5-216ENST00000484309 TNFRSF1AP19438 455 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 HNF1AP20823 631 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 PAICSP22234 425 aaKnown RBP10.37□□□□□ -0.75
MSH5-216ENST00000484309 GSTT1P30711 240 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 NAA10P41227 235 aaPredicted RBP10.37□□□□□ -0.75
MSH5-216ENST00000484309 DAPP51397 102 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 DVL1P1P54792 670 aaPredicted RBP10.37□□□□□ -0.75
MSH5-216ENST00000484309 SRSF2Q01130 221 aaKnown RBP10.37□□□□□ -0.75
MSH5-216ENST00000484309 MALLQ13021 153 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 PCK2Q16822 640 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 KLHL12Q53G59 568 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 GLYATL3Q5SZD4 288 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 PGAP1Q75T13 922 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 MRPL21Q7Z2W9 205 aaKnown RBP10.37□□□□□ -0.75
MSH5-216ENST00000484309 CPOQ8IVL8 374 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 OR13G1Q8NGZ3 307 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 DVL3Q92997 716 aaPredicted RBP10.37□□□□□ -0.75
MSH5-216ENST00000484309 UTP4Q969X6 686 aaKnown RBP10.37□□□□□ -0.75
MSH5-216ENST00000484309 TMEM186Q96B77 213 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 RAB39BQ96DA2 213 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 PLEKHA8Q96JA3 519 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 MEGF10Q96KG7 1140 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 AMELYQ99218 206 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 HIF1ANQ9NWT6 349 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 DNAJC27Q9NZQ0 273 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 IL19Q9UHD0 177 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 PPP1R3CQ9UQK1 317 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 NPTNQ9Y639 398 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 COL6A5A8TX70 2615 aa10.37□□□□□ -0.75
MSH5-216ENST00000484309 MXRA5Q9NR99 2828 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 M0R129 80 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 TBX1O43435 398 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 ZNF205O95201 554 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 IFNA2P01563 188 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 SBK2P0C263 348 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 OTX1P32242 354 aaPredicted RBP10.36□□□□□ -0.75
MSH5-216ENST00000484309 CX3CR1P49238 355 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 MMP16P51512 607 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 BLVRAP53004 296 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 RPS7P62081 194 aaKnown RBP10.36□□□□□ -0.75
MSH5-216ENST00000484309 CDK5Q00535 292 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 ZNF92Q03936 586 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 SLC3A1Q07837 685 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 ATP6AP1Q15904 470 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 TEX30Q5JUR7 227 aa10.36□□□□□ -0.75
MSH5-216ENST00000484309 DRAM2Q6UX65 266 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms