RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 ZCCHC7Q8N3Z6 543 aaKnown RBP1.08□□□□□ -2.24
SCAF11-207ENST00000484275 BHLHE23Q8NDY6 225 aa1.08□□□□□ -2.24
SCAF11-207ENST00000484275 OR1J4Q8NGS1 313 aa1.08□□□□□ -2.24
SCAF11-207ENST00000484275 ATP5SQ99766 215 aa1.08□□□□□ -2.24
SCAF11-207ENST00000484275 RAB23Q9ULC3 237 aa1.08□□□□□ -2.24
SCAF11-207ENST00000484275 TMCC3Q9ULS5 477 aa1.08□□□□□ -2.24
SCAF11-207ENST00000484275 FAM240BA0A1B0GVZ2 78 aa1.07□□□□□ -2.24
SCAF11-207ENST00000484275 E7EQL1 145 aa1.07□□□□□ -2.24
SCAF11-207ENST00000484275 EIF4E2O60573 245 aaKnown RBP1.07□□□□□ -2.24
SCAF11-207ENST00000484275 SURF6O75683 361 aaKnown RBP1.07□□□□□ -2.24
SCAF11-207ENST00000484275 IGLV2-8P01709 118 aa1.07□□□□□ -2.24
SCAF11-207ENST00000484275 U2AF2P26368 475 aaKnown RBP eCLIP1.07□□□□□ -2.246e-8■■■■□ 23.6
SCAF11-207ENST00000484275 PLP1P60201 277 aa1.07□□□□□ -2.24
SCAF11-207ENST00000484275 CHIT1Q13231 466 aa1.07□□□□□ -2.24
SCAF11-207ENST00000484275 NCF4Q15080 339 aa1.07□□□□□ -2.24
SCAF11-207ENST00000484275 SLC9A3R2Q15599 337 aa1.07□□□□□ -2.24
SCAF11-207ENST00000484275 LUZP6Q538Z0 58 aa1.07□□□□□ -2.24
SCAF11-207ENST00000484275 CENPPQ6IPU0 288 aa1.07□□□□□ -2.24
SCAF11-207ENST00000484275 H3F3CQ6NXT2 135 aa1.07□□□□□ -2.24
SCAF11-207ENST00000484275 RGS9BPQ6ZS82 235 aa1.07□□□□□ -2.24
SCAF11-207ENST00000484275 RUFY3Q7L099 469 aa1.07□□□□□ -2.24
SCAF11-207ENST00000484275 TGIF2LXQ8IUE1 241 aa1.07□□□□□ -2.24
SCAF11-207ENST00000484275 TBC1D21Q8IYX1 336 aa1.07□□□□□ -2.24
SCAF11-207ENST00000484275 EIF1ADQ8N9N8 165 aaKnown RBP1.07□□□□□ -2.24
SCAF11-207ENST00000484275 CHST4Q8NCG5 386 aa1.07□□□□□ -2.24
SCAF11-207ENST00000484275 B3GNT7Q8NFL0 401 aa1.07□□□□□ -2.24
SCAF11-207ENST00000484275 ZBTB18Q99592 522 aa1.07□□□□□ -2.24
SCAF11-207ENST00000484275 TMEM243Q9BU79 118 aa1.07□□□□□ -2.24
SCAF11-207ENST00000484275 TMEM27Q9HBJ8 222 aa1.07□□□□□ -2.24
SCAF11-207ENST00000484275 COX16Q9P0S2 106 aa1.07□□□□□ -2.24
SCAF11-207ENST00000484275 SUN2Q9UH99 717 aa1.07□□□□□ -2.24
SCAF11-207ENST00000484275 IGKV1-27A0A075B6S5 117 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 IGHV1-69DA0A0B4J2H0 117 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 PRAMEF26H0Y7S4 382 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 H7C1H1 209 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 OVOL1O14753 267 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 KLHL41O60662 606 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 MX1P20591 662 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 BMI1P35226 326 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 CRYBB2P43320 205 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 UBE2E1P51965 193 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 RPL23AP62750 156 aaKnown RBP1.06□□□□□ -2.24
SCAF11-207ENST00000484275 PPIDQ08752 370 aaKnown RBP1.06□□□□□ -2.24
SCAF11-207ENST00000484275 IL24Q13007 206 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 DGCR6Q14129 220 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 ZNF266Q14584 549 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 SLC25A35Q3KQZ1 300 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 CASC1Q6TDU7 716 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 MBOAT1Q6ZNC8 495 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 USP50Q70EL3 339 aaPredicted RBP1.06□□□□□ -2.24
SCAF11-207ENST00000484275 DAZ4Q86SG3 579 aaKnown RBP1.06□□□□□ -2.24
SCAF11-207ENST00000484275 LRRC75AQ8NAA5 344 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 GHSRQ92847 366 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 TMEM230Q96A57 120 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 SLC29A1Q99808 456 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 C1orf50Q9BV19 199 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 NEUROG2Q9H2A3 272 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 DAZ1Q9NQZ3 744 aaKnown RBP1.06□□□□□ -2.24
SCAF11-207ENST00000484275 TAS2R1Q9NYW7 299 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 IKZF2Q9UKS7 526 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 NUP50Q9UKX7 468 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 COMMD3-BMI1R4GMX3 469 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 ICE1Q9Y2F5 2266 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 DOCK6Q96HP0 2047 aa1.06□□□□□ -2.24
SCAF11-207ENST00000484275 VWDEQ8N2E2 1590 aa1.05□□□□□ -2.24
SCAF11-207ENST00000484275 IGLV10-54A0A075B6I4 117 aa1.05□□□□□ -2.24
SCAF11-207ENST00000484275 SYNJ2BP-COX16A0A087WUM0 186 aa1.05□□□□□ -2.24
SCAF11-207ENST00000484275 A0A1B0GUH1 482 aa1.05□□□□□ -2.24
SCAF11-207ENST00000484275 NCBP2LA6PVI3 153 aaKnown RBP1.05□□□□□ -2.24
SCAF11-207ENST00000484275 K7EMT4 169 aa1.05□□□□□ -2.24
SCAF11-207ENST00000484275 FKBP6O75344 327 aa1.05□□□□□ -2.24
SCAF11-207ENST00000484275 FSTL3O95633 263 aa1.05□□□□□ -2.24
SCAF11-207ENST00000484275 RPN2P04844 631 aa1.05□□□□□ -2.24
SCAF11-207ENST00000484275 FUSP35637 526 aaKnown RBP eCLIP1.05□□□□□ -2.24
SCAF11-207ENST00000484275 ZMYND11Q15326 602 aa1.05□□□□□ -2.24
SCAF11-207ENST00000484275 CHRNA6Q15825 494 aa1.05□□□□□ -2.24
SCAF11-207ENST00000484275 CEP55Q53EZ4 464 aa1.05□□□□□ -2.24
SCAF11-207ENST00000484275 CTSL3PQ5NE16 218 aa1.05□□□□□ -2.24
SCAF11-207ENST00000484275 MORN3Q6PF18 240 aaPredicted RBP1.05□□□□□ -2.24
SCAF11-207ENST00000484275 TMEM150AQ86TG1 271 aa1.05□□□□□ -2.24
SCAF11-207ENST00000484275 OR52E2Q8NGJ4 325 aa1.05□□□□□ -2.24
SCAF11-207ENST00000484275 ZNF606Q8WXB4 792 aa1.05□□□□□ -2.24
SCAF11-207ENST00000484275 CCDC126Q96EE4 140 aa1.05□□□□□ -2.24
SCAF11-207ENST00000484275 NUDT9Q9BW91 350 aa1.05□□□□□ -2.24
SCAF11-207ENST00000484275 PKIBQ9C010 78 aa1.05□□□□□ -2.24
SCAF11-207ENST00000484275 PARP11Q9NR21 331 aa1.05□□□□□ -2.24
SCAF11-207ENST00000484275 HYPKQ9NX55 129 aa1.05□□□□□ -2.24
SCAF11-207ENST00000484275 SLC17A7Q9P2U7 560 aa1.05□□□□□ -2.24
SCAF11-207ENST00000484275 FARSAQ9Y285 508 aaKnown RBP1.05□□□□□ -2.24
SCAF11-207ENST00000484275 H0Y8G0 127 aa1.04□□□□□ -2.24
SCAF11-207ENST00000484275 SMKR1H3BMG3 65 aa1.04□□□□□ -2.24
SCAF11-207ENST00000484275 CLDN34H7C241 214 aa1.04□□□□□ -2.24
SCAF11-207ENST00000484275 CXCL11O14625 94 aa1.04□□□□□ -2.24
SCAF11-207ENST00000484275 RAB29O14966 203 aa1.04□□□□□ -2.24
SCAF11-207ENST00000484275 OR7C2O60412 319 aa1.04□□□□□ -2.24
SCAF11-207ENST00000484275 MCF2P10911 925 aa1.04□□□□□ -2.24
SCAF11-207ENST00000484275 TMED10P49755 219 aaKnown RBP1.04□□□□□ -2.24
SCAF11-207ENST00000484275 SULT1E1P49888 294 aa1.04□□□□□ -2.24
SCAF11-207ENST00000484275 ATP5IP56385 69 aaPredicted RBP1.04□□□□□ -2.24
SCAF11-207ENST00000484275 PNOCQ13519 176 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms