RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 TFR2Q9UP52 801 aa3.48□□□□□ -1.85
PTCD3-214ENST00000483925 SNX24Q9Y343 169 aa3.48□□□□□ -1.85
PTCD3-214ENST00000483925 TBL2Q9Y4P3 447 aaKnown RBP3.48□□□□□ -1.85
PTCD3-214ENST00000483925 KCNE3Q9Y6H6 103 aa3.48□□□□□ -1.85
PTCD3-214ENST00000483925 USH1CQ9Y6N9 552 aa3.48□□□□□ -1.85
PTCD3-214ENST00000483925 AK9Q5TCS8 1911 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 IGHV2OR16-5A0A0B4J2B6 119 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 IFITM10A6NMD0 228 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 NCBP2LA6PVI3 153 aaKnown RBP3.47□□□□□ -1.85
PTCD3-214ENST00000483925 C9J4A7 227 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 FTCDNL1E5RQL4 147 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 K7N7A8 449 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 GABRPO00591 440 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 HPGDSO60760 199 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 SNAPINO95295 136 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 UTS2O95399 124 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 MELTFP08582 738 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 COX5BP10606 129 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 HIST1H1CP16403 213 aaKnown RBP3.47□□□□□ -1.85
PTCD3-214ENST00000483925 TCP1P17987 556 aaKnown RBP3.47□□□□□ -1.85
PTCD3-214ENST00000483925 GABRG2P18507 467 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 ANOS1P23352 680 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 MYL9P24844 172 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 AQP1P29972 269 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 RPA3P35244 121 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-214ENST00000483925 VDAC2P45880 294 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-214ENST00000483925 PRELPP51888 382 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 AP3S2P59780 193 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 RHOAP61586 193 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 CD164Q04900 197 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 QPRTQ15274 297 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 GUSBP1Q15486 140 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 IMPG1Q17R60 797 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 PDZD11Q5EBL8 140 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 OR2B11Q5JQS5 317 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 ANKRD22Q5VYY1 191 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 HBMQ6B0K9 141 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 FAM173BQ6P4H8 233 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 TTC33Q6PID6 262 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-214ENST00000483925 REG3GQ6UW15 175 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 ZNF620Q6ZNG0 422 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 Q6ZT83 130 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 FAM71AQ8IYT1 594 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 ZNF786Q8N393 782 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 ACBD4Q8NC06 268 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 CHST4Q8NCG5 386 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 OR8G5Q8NG78 346 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 DYNC2LI1Q8TCX1 351 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 ZFP90Q8TF47 636 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 FLYWCH2Q96CP2 140 aaKnown RBP3.47□□□□□ -1.85
PTCD3-214ENST00000483925 ZNF597Q96LX8 424 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 APOL4Q9BPW4 351 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 PDCD1LG2Q9BQ51 273 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 OR51V1Q9H2C8 321 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 MIEF1Q9NQG6 463 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 KLHL21Q9UJP4 597 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 C3orf18Q9UK00 162 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 RAB23Q9ULC3 237 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 UGT2A1Q9Y4X1 527 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 KLF12Q9Y4X4 402 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 STYXL1Q9Y6J8 313 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 RAB3GAP2Q9H2M9 1393 aa3.47□□□□□ -1.85
PTCD3-214ENST00000483925 TTC21AQ8NDW8 1320 aa3.46□□□□□ -1.85
PTCD3-214ENST00000483925 GREB1LQ9C091 1923 aaPredicted RBP3.46□□□□□ -1.85
PTCD3-214ENST00000483925 M0R036 132 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 BMPR1BO00238 502 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 ATP8B1O43520 1251 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 CYTH3O43739 400 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 ZFAND5O76080 213 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 NSA2O95478 260 aaKnown RBP3.46□□□□□ -1.86
PTCD3-214ENST00000483925 TTC4O95801 387 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 C6orf47O95873 294 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 PTTG1O95997 202 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 PTHP01270 115 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 CD8AP01732 235 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 HSPD1P10809 573 aaKnown RBP3.46□□□□□ -1.86
PTCD3-214ENST00000483925 ZNF7P17097 686 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-214ENST00000483925 ATF6P18850 670 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 FMO3P31513 532 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 PFN2P35080 140 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 COILP38432 576 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-214ENST00000483925 PPP1R2P41236 205 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 GDI2P50395 445 aaKnown RBP3.46□□□□□ -1.86
PTCD3-214ENST00000483925 RAP1GDS1P52306 607 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 STC1P52823 247 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 VSX2P58304 361 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-214ENST00000483925 ERVFC1-1P60608 527 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 ELAVL2Q12926 359 aaKnown RBP3.46□□□□□ -1.86
PTCD3-214ENST00000483925 AQP6Q13520 282 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 TGIF1Q15583 401 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 TRAM1Q15629 374 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 TRIP13Q15645 432 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-214ENST00000483925 NHLRC3Q5JS37 347 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 C1orf100Q5SVJ3 147 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 OGFRL1Q5TC84 451 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-214ENST00000483925 STPG1Q5TH74 334 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 FAM45BPQ6NSW5 357 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 PPP1R2P3Q6NXS1 205 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 DRAM2Q6UX65 266 aa3.46□□□□□ -1.86
PTCD3-214ENST00000483925 CXCL17Q6UXB2 119 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms