RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 DUX4L5P0CJ88 424 aa8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 DUX4L6P0CJ89 424 aa8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 DUX4L7P0CJ90 424 aa8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 IFI30P13284 250 aa8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 KIR2DS4P43632 304 aa8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 RGS6P49758 472 aa8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 RAP1BP61224 184 aa8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 RAP1AP62834 184 aa8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 RSPO1Q2MKA7 263 aaPredicted RBP8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 TNFAIP8L3Q5GJ75 292 aa8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 BEND6Q5SZJ8 279 aaPredicted RBP8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 DUX4L9Q6RFH8 374 aaPredicted RBP8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 FAM90A1Q86YD7 464 aa8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 CELF2-AS1Q8N7Q2 184 aa8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 OR51A7Q8NH64 312 aa8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 SLC26A7Q8TE54 656 aa8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 ST8SIA4Q92187 359 aa8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 ERGIC1Q969X5 290 aa8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 BPIFA2Q96DR5 249 aa8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 CNTD2Q9H8S5 307 aa8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 ONECUT1Q9UBC0 465 aa8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 DUX4Q9UBX2 424 aa8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 KPTNQ9Y664 436 aa8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 DYNC2H1Q8NCM8 4307 aaKnown RBP8.9□□□□□ -0.98
SMARCC1-205ENST00000483847 IGHV3OR15-7A0A075B7D8 119 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 TEX13CA0A0J9YWL9 993 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 OOEPA6NGQ2 149 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 H3BUX3 64 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 VSIG10L2P0DP72 767 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 CA6P23280 308 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 SAA4P35542 130 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 OR1E2P47887 323 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 GK2Q14410 553 aaPredicted RBP8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 KCNJ8Q15842 424 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 LY6EQ16553 131 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 AGKQ53H12 422 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 MESTQ5EB52 335 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 ZBTB37Q5TC79 503 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 METAP1DQ6UB28 335 aaPredicted RBP8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 ZNF826PQ6ZT77 177 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 CALHM3Q86XJ0 350 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 Q8N7P7 452 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 LY6G5BQ8NDX9 201 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 OR5R1Q8NH85 324 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 R3HDM4Q96D70 268 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 Q96M85 177 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 EBF4Q9BQW3 602 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 HCAR1Q9BXC0 346 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 RERGLQ9H628 205 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 FN3KRPQ9HA64 309 aa8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 COA3Q9Y2R0 106 aaPredicted RBP8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 CAB39Q9Y376 341 aaPredicted RBP8.89□□□□□ -0.99
SMARCC1-205ENST00000483847 BIRC6Q9NR09 4857 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 TRAV38-1A0A0B4J264 116 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 TMEM120BA0PK00 339 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 MEIOCA2RUB1 952 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 ADARB2-AS1A8MUL3 147 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 PTBP3O95758 552 aaKnown RBP8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 ECDO95905 644 aaPredicted RBP8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 PAHP00439 452 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 VIMP08670 466 aaKnown RBP8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 CD28P10747 220 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 IGLL1P15814 213 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 ZNF26P17031 533 aaPredicted RBP8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 HIST1H3AP68431 136 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 OR8G1Q15617 311 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 HIST2H3PS2Q5TEC6 136 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 C11orf88Q6PI97 169 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 COLCA1Q6ZS62 124 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 HIST2H3AQ71DI3 136 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 DHDDSQ86SQ9 333 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 NAA40Q86UY6 237 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 GCSAMQ8N6F7 178 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 OR4S1Q8NGB4 309 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 OR4C13Q8NGP0 309 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 OR13C2Q8NGS9 318 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 OR2T6Q8NHC8 308 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 NPRL2Q8WTW4 380 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 C17orf50Q8WW18 174 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 RORBQ92753 470 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 SLCO4A1Q96BD0 722 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 WWC2-AS2Q96NR7 200 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 KAT8Q9H7Z6 458 aaKnown RBP8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 C1orf123Q9NWV4 160 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 ATPIF1Q9UII2 106 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 LHFPL6Q9Y693 200 aa8.88□□□□□ -0.99
SMARCC1-205ENST00000483847 WI2-2373I1.2A0A1W2PRP0 233 aa8.87□□□□□ -0.99
SMARCC1-205ENST00000483847 PRSS37A4D1T9 235 aa8.87□□□□□ -0.99
SMARCC1-205ENST00000483847 POLR3GO15318 223 aaPredicted RBP8.87□□□□□ -0.99
SMARCC1-205ENST00000483847 NDUFA2O43678 99 aa8.87□□□□□ -0.99
SMARCC1-205ENST00000483847 SLC16A7O60669 478 aa8.87□□□□□ -0.99
SMARCC1-205ENST00000483847 ANOS1P23352 680 aa8.87□□□□□ -0.99
SMARCC1-205ENST00000483847 EEF1B2P24534 225 aaKnown RBP8.87□□□□□ -0.99
SMARCC1-205ENST00000483847 PAX6P26367 422 aa8.87□□□□□ -0.99
SMARCC1-205ENST00000483847 SLC9A3P48764 834 aa8.87□□□□□ -0.99
SMARCC1-205ENST00000483847 IDH3AP50213 366 aa8.87□□□□□ -0.99
SMARCC1-205ENST00000483847 GZMMP51124 257 aa8.87□□□□□ -0.99
SMARCC1-205ENST00000483847 LSM6P62312 80 aaKnown RBP8.87□□□□□ -0.99
SMARCC1-205ENST00000483847 MEP1BQ16820 701 aa8.87□□□□□ -0.99
SMARCC1-205ENST00000483847 CRIP3Q6Q6R5 217 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms