RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TRAP1Q12931 704 aaKnown RBP15.04■□□□□ -0
ATG4B-221ENST00000483778 HSP90B2PQ58FF3 399 aa15.04■□□□□ -0
ATG4B-221ENST00000483778 PRAMEF6Q5VXH4 476 aa15.04■□□□□ -0
ATG4B-221ENST00000483778 DNM1P34Q6PK57 102 aa15.04■□□□□ -0
ATG4B-221ENST00000483778 MUC20Q8N307 709 aaPredicted RBP15.04■□□□□ -0
ATG4B-221ENST00000483778 CYB561A3Q8NBI2 242 aa15.04■□□□□ -0
ATG4B-221ENST00000483778 CDRT15Q96T59 188 aa15.04■□□□□ -0
ATG4B-221ENST00000483778 MRI1Q9BV20 369 aa15.04■□□□□ -0
ATG4B-221ENST00000483778 EGLN3Q9H6Z9 239 aa15.04■□□□□ -0
ATG4B-221ENST00000483778 UFSP2Q9NUQ7 469 aa15.04■□□□□ -0
ATG4B-221ENST00000483778 ARL8BQ9NVJ2 186 aa15.04■□□□□ -0
ATG4B-221ENST00000483778 OR5V1Q9UGF6 321 aa15.04■□□□□ -0
ATG4B-221ENST00000483778 LRCH1Q9Y2L9 728 aa15.04■□□□□ -0
ATG4B-221ENST00000483778 IGHV2-70DA0A0C4DH43 119 aa15.03■□□□□ -0
ATG4B-221ENST00000483778 TVP23AA6NH52 213 aa15.03■□□□□ -0
ATG4B-221ENST00000483778 ARPC2O15144 300 aa15.03■□□□□ -0
ATG4B-221ENST00000483778 OR10H3O60404 316 aa15.03■□□□□ -0
ATG4B-221ENST00000483778 SNX3O60493 162 aa15.03■□□□□ -0
ATG4B-221ENST00000483778 FAM20BO75063 409 aa15.03■□□□□ -0
ATG4B-221ENST00000483778 LCATP04180 440 aa15.03■□□□□ -0
ATG4B-221ENST00000483778 SMIM11AP58511 58 aa15.03■□□□□ -0
ATG4B-221ENST00000483778 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.03■□□□□ -0
ATG4B-221ENST00000483778 BAMBIQ13145 260 aa15.03■□□□□ -0
ATG4B-221ENST00000483778 SNAI3Q3KNW1 292 aa15.03■□□□□ -0
ATG4B-221ENST00000483778 ZNF404Q494X3 552 aa15.03■□□□□ -0
ATG4B-221ENST00000483778 CLEC12AQ5QGZ9 265 aa15.03■□□□□ -0
ATG4B-221ENST00000483778 PGBD2Q6P3X8 592 aa15.03■□□□□ -0
ATG4B-221ENST00000483778 PGM2L1Q6PCE3 622 aa15.03■□□□□ -0
ATG4B-221ENST00000483778 RBMS3Q6XE24 437 aaKnown RBP15.03■□□□□ -0
ATG4B-221ENST00000483778 ZNF841Q6ZN19 808 aa15.03■□□□□ -0
ATG4B-221ENST00000483778 RAB40AQ8WXH6 277 aa15.03■□□□□ -0
ATG4B-221ENST00000483778 ATF6BQ99941 703 aa15.03■□□□□ -0
ATG4B-221ENST00000483778 CDADC1Q9BWV3 514 aa15.03■□□□□ -0
ATG4B-221ENST00000483778 HCAR1Q9BXC0 346 aa15.03■□□□□ -0
ATG4B-221ENST00000483778 MED4Q9NPJ6 270 aa15.03■□□□□ -0
ATG4B-221ENST00000483778 IFNL4K9M1U5 179 aa15.02■□□□□ -0
ATG4B-221ENST00000483778 TMPRSS2O15393 492 aa15.02■□□□□ -0
ATG4B-221ENST00000483778 HLA-DQA2P01906 255 aa15.02■□□□□ -0
ATG4B-221ENST00000483778 RAD23AP54725 363 aa15.02■□□□□ -0
ATG4B-221ENST00000483778 GNB2P62879 340 aa15.02■□□□□ -0
ATG4B-221ENST00000483778 PPP1R8Q12972 351 aaKnown RBP15.02■□□□□ -0
ATG4B-221ENST00000483778 SLC9A3R2Q15599 337 aa15.02■□□□□ -0
ATG4B-221ENST00000483778 ZNF181Q2M3W8 571 aa15.02■□□□□ -0
ATG4B-221ENST00000483778 ZNF620Q6ZNG0 422 aa15.02■□□□□ -0
ATG4B-221ENST00000483778 PARP8Q8N3A8 854 aa15.02■□□□□ -0
ATG4B-221ENST00000483778 OR51L1Q8NGJ5 315 aa15.02■□□□□ -0
ATG4B-221ENST00000483778 OR8D4Q8NGM9 314 aa15.02■□□□□ -0
ATG4B-221ENST00000483778 OR2AE1Q8NHA4 323 aa15.02■□□□□ -0
ATG4B-221ENST00000483778 SGMS2Q8NHU3 365 aa15.02■□□□□ -0
ATG4B-221ENST00000483778 GNPDA2Q8TDQ7 276 aa15.02■□□□□ -0
ATG4B-221ENST00000483778 UPRTQ96BW1 309 aa15.02■□□□□ -0
ATG4B-221ENST00000483778 NEIL1Q96FI4 390 aaPredicted RBP15.02■□□□□ -0
ATG4B-221ENST00000483778 ZNF747Q9BV97 191 aa15.02■□□□□ -0
ATG4B-221ENST00000483778 MS4A7Q9GZW8 240 aaPredicted RBP15.02■□□□□ -0
ATG4B-221ENST00000483778 IL1RAPQ9NPH3 570 aa15.02■□□□□ -0
ATG4B-221ENST00000483778 KRCC1Q9NPI7 259 aaPredicted RBP15.02■□□□□ -0
ATG4B-221ENST00000483778 MIOXQ9UGB7 285 aa15.02■□□□□ -0
ATG4B-221ENST00000483778 TMCC3Q9ULS5 477 aa15.02■□□□□ -0
ATG4B-221ENST00000483778 KIR2DS1A0A191URI9 304 aa15.01□□□□□ -0.01
ATG4B-221ENST00000483778 GMNNO75496 209 aa15.01□□□□□ -0.01
ATG4B-221ENST00000483778 PLATP00750 562 aa15.01□□□□□ -0.01
ATG4B-221ENST00000483778 CA6P23280 308 aa15.01□□□□□ -0.01
ATG4B-221ENST00000483778 NOS3P29474 1203 aa15.01□□□□□ -0.01
ATG4B-221ENST00000483778 GATA4P43694 442 aa15.01□□□□□ -0.01
ATG4B-221ENST00000483778 GYS2P54840 703 aa15.01□□□□□ -0.01
ATG4B-221ENST00000483778 ZNF92Q03936 586 aa15.01□□□□□ -0.01
ATG4B-221ENST00000483778 TSPAN31Q12999 210 aa15.01□□□□□ -0.01
ATG4B-221ENST00000483778 SLC36A3Q495N2 470 aa15.01□□□□□ -0.01
ATG4B-221ENST00000483778 ZDHHC21Q8IVQ6 265 aa15.01□□□□□ -0.01
ATG4B-221ENST00000483778 OR9Q2Q8NGE9 314 aa15.01□□□□□ -0.01
ATG4B-221ENST00000483778 OR2AJ1Q8NGZ0 328 aa15.01□□□□□ -0.01
ATG4B-221ENST00000483778 BTBD10Q9BSF8 475 aa15.01□□□□□ -0.01
ATG4B-221ENST00000483778 TRRAPQ9Y4A5 3859 aa15□□□□□ -0.01
ATG4B-221ENST00000483778 C22orf46C9J442 243 aa15□□□□□ -0.01
ATG4B-221ENST00000483778 BHLHE40O14503 412 aa15□□□□□ -0.01
ATG4B-221ENST00000483778 IDH3BO43837 385 aa15□□□□□ -0.01
ATG4B-221ENST00000483778 FCN3O75636 299 aa15□□□□□ -0.01
ATG4B-221ENST00000483778 FABP3P05413 133 aa15□□□□□ -0.01
ATG4B-221ENST00000483778 CD200P41217 278 aa15□□□□□ -0.01
ATG4B-221ENST00000483778 PITPNBP48739 271 aa15□□□□□ -0.01
ATG4B-221ENST00000483778 FOXL1Q12952 345 aa15□□□□□ -0.01
ATG4B-221ENST00000483778 ECH1Q13011 328 aa15□□□□□ -0.01
ATG4B-221ENST00000483778 WDR25Q64LD2 544 aaPredicted RBP15□□□□□ -0.01
ATG4B-221ENST00000483778 SFRP4Q6FHJ7 346 aaPredicted RBP15□□□□□ -0.01
ATG4B-221ENST00000483778 LRRN1Q6UXK5 716 aa15□□□□□ -0.01
ATG4B-221ENST00000483778 BRD3OSQ6XYD6 125 aa15□□□□□ -0.01
ATG4B-221ENST00000483778 PGAM4Q8N0Y7 254 aa15□□□□□ -0.01
ATG4B-221ENST00000483778 FITM2Q8N6M3 262 aa15□□□□□ -0.01
ATG4B-221ENST00000483778 BOLLQ8N9W6 283 aaKnown RBP15□□□□□ -0.01
ATG4B-221ENST00000483778 ZMYND19Q96E35 227 aaPredicted RBP15□□□□□ -0.01
ATG4B-221ENST00000483778 NSMCE2Q96MF7 247 aa15□□□□□ -0.01
ATG4B-221ENST00000483778 NUDT16L1Q9BRJ7 211 aaKnown RBP15□□□□□ -0.01
ATG4B-221ENST00000483778 RASSF4Q9H2L5 321 aa15□□□□□ -0.01
ATG4B-221ENST00000483778 CTSZQ9UBR2 303 aa15□□□□□ -0.01
ATG4B-221ENST00000483778 MAGEL2Q9UJ55 1249 aa15□□□□□ -0.01
ATG4B-221ENST00000483778 TRAV40A0A0B4J280 105 aa14.99□□□□□ -0.01
ATG4B-221ENST00000483778 CD300LBA8K4G0 201 aa14.99□□□□□ -0.01
ATG4B-221ENST00000483778 M0R135 149 aa14.99□□□□□ -0.01
ATG4B-221ENST00000483778 TNFRSF13BO14836 293 aaPredicted RBP14.99□□□□□ -0.01
ATG4B-221ENST00000483778 KCNAB3O43448 404 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms