RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 TMPRSS2O15393 492 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 IRF2P14316 349 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 MSX2P35548 267 aaPredicted RBP13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 MTNR1AP48039 350 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 ECH1Q13011 328 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 MALLQ13021 153 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 MAB21L1Q13394 359 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 KRTAP27-1Q3LI81 207 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 ZNF404Q494X3 552 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 SLC35F1Q5T1Q4 408 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 SHISA2Q6UWI4 295 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 NLRC3Q7RTR2 1065 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 ZBTB46Q86UZ6 589 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 C19orf18Q8NEA5 215 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 SDR9C7Q8NEX9 313 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 OR8B3Q8NGG8 313 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 SLC25A28Q96A46 364 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 MCUR1Q96AQ8 359 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 OR8B2Q96RD0 313 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 ATF6BQ99941 703 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 NSRP1Q9H0G5 558 aaKnown RBP13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 ZMAT3Q9HA38 289 aaKnown RBP13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 UFSP2Q9NUQ7 469 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 CYB5R1Q9UHQ9 305 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 TMCC3Q9ULS5 477 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 KIR2DS1A0A191URI9 304 aa13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 WIPF1O43516 503 aa13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 IDH3BO43837 385 aa13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 SEMG1P04279 462 aa13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 RNASE1P07998 156 aaKnown RBP13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 PPIAL4GP0DN37 164 aa13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 PRDX6P30041 224 aa13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 GGT2P36268 569 aa13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 IFNGR2P38484 337 aa13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 PITPNBP48739 271 aa13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 TPTEP56180 551 aa13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 TRAP1Q12931 704 aaKnown RBP13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 SLC9A3R2Q15599 337 aa13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 LYPD2Q6UXB3 125 aa13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 PGAP1Q75T13 922 aa13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 OR11L1Q8NGX0 322 aa13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 SPRYD4Q8WW59 207 aaPredicted RBP13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 TAF15Q92804 592 aaKnown RBP eCLIP13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 UPRTQ96BW1 309 aa13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 FAM107BQ9H098 131 aa13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 MED4Q9NPJ6 270 aa13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 CLN8Q9UBY8 286 aa13.84□□□□□ -0.19
RAB11FIP3-209ENST00000483002 TRAV40A0A0B4J280 105 aa13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 A0A1B0GWJ7 208 aa13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 FAM20BO75063 409 aa13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 FSTL3O95633 263 aa13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 ZNF823P16415 610 aa13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 RRM2P31350 389 aa13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 GATA4P43694 442 aa13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 GSSP48637 474 aa13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 MPPED2Q15777 294 aa13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 CLEC12AQ5QGZ9 265 aa13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 PRAMEF6Q5VXH4 476 aa13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 MRPL21Q7Z2W9 205 aaKnown RBP13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 CELF2-AS1Q8N7Q2 184 aa13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 GNPDA2Q8TDQ7 276 aa13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 DACT3Q96B18 629 aaPredicted RBP13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 MAP6Q96JE9 813 aa13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 NSMCE2Q96MF7 247 aa13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 NUDT16L1Q9BRJ7 211 aaKnown RBP13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 UNKLQ9H9P5 680 aaKnown RBP13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 PNRC2Q9NPJ4 139 aaKnown RBP13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 MRPL22Q9NWU5 206 aaKnown RBP13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 MAGEL2Q9UJ55 1249 aa13.83□□□□□ -0.2
RAB11FIP3-209ENST00000483002 CLDN34H7C241 214 aa13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 M0R135 149 aa13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 PLATP00750 562 aa13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 FABP3P05413 133 aa13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 HSD17B1P14061 328 aa13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 CA6P23280 308 aa13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 PYCR1P32322 319 aa13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 RPS27P42677 84 aaKnown RBP13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 RAD23AP54725 363 aa13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 HOXA4Q00056 320 aaPredicted RBP13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 TSPAN31Q12999 210 aa13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 OR8G1Q15617 311 aa13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 WDR25Q64LD2 544 aaPredicted RBP13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 DCDC5Q6ZRR9 648 aa13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 C9orf139Q6ZV77 190 aa13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 BOLLQ8N9W6 283 aaKnown RBP13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 CYB561A3Q8NBI2 242 aa13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 Q8TCH9 128 aa13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 ERGIC1Q969X5 290 aa13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 ZNF799Q96GE5 643 aa13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 CDRT15Q96T59 188 aa13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 EGLN3Q9H6Z9 239 aa13.82□□□□□ -0.2
RAB11FIP3-209ENST00000483002 MDFIC2A0A1B0GVS7 189 aa13.81□□□□□ -0.2
RAB11FIP3-209ENST00000483002 TVP23AA6NH52 213 aa13.81□□□□□ -0.2
RAB11FIP3-209ENST00000483002 CD300LBA8K4G0 201 aa13.81□□□□□ -0.2
RAB11FIP3-209ENST00000483002 ARPC2O15144 300 aa13.81□□□□□ -0.2
RAB11FIP3-209ENST00000483002 CD200P41217 278 aa13.81□□□□□ -0.2
RAB11FIP3-209ENST00000483002 FGF12P61328 243 aa13.81□□□□□ -0.2
RAB11FIP3-209ENST00000483002 IL13RA1P78552 427 aa13.81□□□□□ -0.2
RAB11FIP3-209ENST00000483002 PRR31Q5SQ13 230 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms