RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 ZNRF4Q8WWF5 429 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 OTULINQ96BN8 352 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 ZNF799Q96GE5 643 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 MAP6Q96JE9 813 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 GAL3ST1Q99999 423 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 COPS4Q9BT78 406 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 TEX12Q9BXU0 123 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 ZNF665Q9H7R5 613 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 WDR76Q9H967 626 aa11.76□□□□□ -0.53
VARS-225ENST00000482996 DDX28Q9NUL7 540 aaKnown RBP11.76□□□□□ -0.53
VARS-225ENST00000482996 IQCF6A8MYZ5 107 aa11.75□□□□□ -0.53
VARS-225ENST00000482996 FAM157AC9JC47 383 aa11.75□□□□□ -0.53
VARS-225ENST00000482996 ZNF593O00488 134 aaPredicted RBP11.75□□□□□ -0.53
VARS-225ENST00000482996 DEAF1O75398 565 aaPredicted RBP11.75□□□□□ -0.53
VARS-225ENST00000482996 HMGN1P05114 100 aa11.75□□□□□ -0.53
VARS-225ENST00000482996 OSMP13725 252 aa11.75□□□□□ -0.53
VARS-225ENST00000482996 SRP14P37108 136 aaKnown RBP11.75□□□□□ -0.53
VARS-225ENST00000482996 RPS27P42677 84 aaKnown RBP11.75□□□□□ -0.53
VARS-225ENST00000482996 GINS1Q14691 196 aa11.75□□□□□ -0.53
VARS-225ENST00000482996 TEX30Q5JUR7 227 aa11.75□□□□□ -0.53
VARS-225ENST00000482996 ACSM5Q6NUN0 579 aa11.75□□□□□ -0.53
VARS-225ENST00000482996 LYPD4Q6UWN0 246 aa11.75□□□□□ -0.53
VARS-225ENST00000482996 ITLN1Q8WWA0 313 aa11.75□□□□□ -0.53
VARS-225ENST00000482996 UTP4Q969X6 686 aaKnown RBP11.75□□□□□ -0.53
VARS-225ENST00000482996 TMEM186Q96B77 213 aa11.75□□□□□ -0.53
VARS-225ENST00000482996 OR2V2Q96R30 315 aa11.75□□□□□ -0.53
VARS-225ENST00000482996 LPAR2Q9HBW0 351 aa11.75□□□□□ -0.53
VARS-225ENST00000482996 CENPMQ9NSP4 180 aa11.75□□□□□ -0.53
VARS-225ENST00000482996 TMEM106BQ9NUM4 274 aa11.75□□□□□ -0.53
VARS-225ENST00000482996 HIF1ANQ9NWT6 349 aa11.75□□□□□ -0.53
VARS-225ENST00000482996 KIF17Q9P2E2 1029 aa11.75□□□□□ -0.53
VARS-225ENST00000482996 PPP1R3CQ9UQK1 317 aa11.75□□□□□ -0.53
VARS-225ENST00000482996 NPTNQ9Y639 398 aa11.75□□□□□ -0.53
VARS-225ENST00000482996 TRAV20A0A0B4J274 112 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 IFNL4K9M1U5 179 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 IGHV2-5P01817 119 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 CLUP10909 449 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 GSTT1P30711 240 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 SRP9P49458 86 aaKnown RBP11.74□□□□□ -0.53
VARS-225ENST00000482996 GK2Q14410 553 aaPredicted RBP11.74□□□□□ -0.53
VARS-225ENST00000482996 PCK2Q16822 640 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 SPRNQ5BIV9 151 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 SHQ1Q6PI26 577 aaKnown RBP11.74□□□□□ -0.53
VARS-225ENST00000482996 DRAM2Q6UX65 266 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 PGAP1Q75T13 922 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 MRPL21Q7Z2W9 205 aaKnown RBP11.74□□□□□ -0.53
VARS-225ENST00000482996 HS3ST5Q8IZT8 346 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 ZNF283Q8N7M2 679 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 BHLHE23Q8NDY6 225 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 OR10S1Q8NGN2 331 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 DNAJC9Q8WXX5 260 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 SLCO4A1Q96BD0 722 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 SLAMF6Q96DU3 332 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 NRBF2Q96F24 287 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 PLEKHA8Q96JA3 519 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 INTS14Q96SY0 518 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 SLC30A2Q9BRI3 323 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 MED20Q9H944 212 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 TMEM100Q9NV29 134 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 UBAP1Q9NZ09 502 aa11.74□□□□□ -0.53
VARS-225ENST00000482996 FBN1P35555 2871 aaKnown RBP11.73□□□□□ -0.53
VARS-225ENST00000482996 SVEP1Q4LDE5 3571 aa11.73□□□□□ -0.53
VARS-225ENST00000482996 FAM183AA6NL82 134 aa11.73□□□□□ -0.53
VARS-225ENST00000482996 ZNF878C9JN71 531 aa11.73□□□□□ -0.53
VARS-225ENST00000482996 PRR23D1E9PI22 279 aaPredicted RBP11.73□□□□□ -0.53
VARS-225ENST00000482996 TIPRLO75663 272 aa11.73□□□□□ -0.53
VARS-225ENST00000482996 GLCEO94923 617 aa11.73□□□□□ -0.53
VARS-225ENST00000482996 PRR23D2P0DMB1 279 aaPredicted RBP11.73□□□□□ -0.53
VARS-225ENST00000482996 PRKACGP22612 351 aa11.73□□□□□ -0.53
VARS-225ENST00000482996 OTX1P32242 354 aaPredicted RBP11.73□□□□□ -0.53
VARS-225ENST00000482996 THBS2P35442 1172 aa11.73□□□□□ -0.53
VARS-225ENST00000482996 SLC15A1P46059 708 aa11.73□□□□□ -0.53
VARS-225ENST00000482996 PRKXP51817 358 aa11.73□□□□□ -0.53
VARS-225ENST00000482996 GRB2P62993 217 aaKnown RBP11.73□□□□□ -0.53
VARS-225ENST00000482996 ELF3P78545 371 aaPredicted RBP11.73□□□□□ -0.53
VARS-225ENST00000482996 EIF2B1Q14232 305 aaKnown RBP11.73□□□□□ -0.53
VARS-225ENST00000482996 KPNB1Q14974 876 aaKnown RBP11.73□□□□□ -0.53
VARS-225ENST00000482996 LINC01590Q5TEZ4 76 aa11.73□□□□□ -0.53
VARS-225ENST00000482996 SHFQ7M4L6 423 aa11.73□□□□□ -0.53
VARS-225ENST00000482996 NAA40Q86UY6 237 aa11.73□□□□□ -0.53
VARS-225ENST00000482996 ERI1Q8IV48 349 aaKnown RBP11.73□□□□□ -0.53
VARS-225ENST00000482996 SPICQ8N5J4 248 aa11.73□□□□□ -0.53
VARS-225ENST00000482996 OR10AD1Q8NGE0 317 aa11.73□□□□□ -0.53
VARS-225ENST00000482996 OR6N2Q8NGY6 317 aa11.73□□□□□ -0.53
VARS-225ENST00000482996 SPRYD4Q8WW59 207 aaPredicted RBP11.73□□□□□ -0.53
VARS-225ENST00000482996 MEGF10Q96KG7 1140 aa11.73□□□□□ -0.53
VARS-225ENST00000482996 KCNJ15Q99712 375 aa11.73□□□□□ -0.53
VARS-225ENST00000482996 OR51V1Q9H2C8 321 aa11.73□□□□□ -0.53
VARS-225ENST00000482996 PCDHB10Q9UN67 800 aa11.73□□□□□ -0.53
VARS-225ENST00000482996 NOP16Q9Y3C1 178 aaKnown RBP11.73□□□□□ -0.53
VARS-225ENST00000482996 WNK2Q9Y3S1 2297 aa11.73□□□□□ -0.53
VARS-225ENST00000482996 STAB1Q9NY15 2570 aa11.72□□□□□ -0.53
VARS-225ENST00000482996 APOC1P02654 83 aa11.72□□□□□ -0.53
VARS-225ENST00000482996 SBK2P0C263 348 aa11.72□□□□□ -0.53
VARS-225ENST00000482996 PSKH1P11801 424 aa11.72□□□□□ -0.53
VARS-225ENST00000482996 RAD23AP54725 363 aa11.72□□□□□ -0.53
VARS-225ENST00000482996 ACTR3P61158 418 aa11.72□□□□□ -0.53
VARS-225ENST00000482996 CDK5Q00535 292 aa11.72□□□□□ -0.53
VARS-225ENST00000482996 PLBD1Q6P4A8 553 aa11.72□□□□□ -0.53
VARS-225ENST00000482996 SPATC1Q76KD6 591 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms