RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 LRRC37A5PQ49AS3 106 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 CCDC157Q569K6 752 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 C3orf33Q6P1S2 294 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 HSD17B13Q7Z5P4 300 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-220ENST00000482507 OR10S1Q8NGN2 331 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 NUDCD2Q8WVJ2 157 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 ST8SIA2Q92186 375 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 MRPS24Q96EL2 167 aaKnown RBP13.23□□□□□ -0.29
ATG4B-220ENST00000482507 LOXL4Q96JB6 756 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 CST11Q9H112 138 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 SLCO5A1Q9H2Y9 848 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 SESN1Q9Y6P5 492 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 A0A1W2PQM1 296 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 KRBOX1C9JBD0 128 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 NPIPA5E9PKD4 350 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 CDX4O14627 284 aaPredicted RBP13.22□□□□□ -0.29
ATG4B-220ENST00000482507 BET1O15155 118 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 HLA-AP01891 365 aaKnown RBP13.22□□□□□ -0.29
ATG4B-220ENST00000482507 TTRP02766 147 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 ANOS1P23352 680 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 ZBTB25P24278 435 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 CD34P28906 385 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 RNF4P78317 190 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 JMJD6Q6NYC1 403 aaPredicted RBP13.22□□□□□ -0.29
ATG4B-220ENST00000482507 ATRAIDQ6UW56 229 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 ZNF574Q6ZN55 896 aaPredicted RBP13.22□□□□□ -0.29
ATG4B-220ENST00000482507 TRAPPC6BQ86SZ2 158 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 ZNF584Q8IVC4 421 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 D2HGDHQ8N465 521 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 LHFPL5Q8TAF8 219 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 RNF133Q8WVZ7 376 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 NPIPA1Q9UND3 350 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 VDAC3Q9Y277 283 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 A0A0A6YYH2 397 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 A6NJ64 397 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 D6RAR5 112 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 EFNA2O43921 213 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 CXADRP78310 365 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 SRSF4Q08170 494 aaKnown RBP13.22□□□□□ -0.29
ATG4B-220ENST00000482507 ZP4Q12836 540 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 PPP1R1AQ13522 171 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 CDNFQ49AH0 187 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 BEX5Q5H9J7 111 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 TFAP2EQ6VUC0 442 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 ZNF704Q6ZNC4 412 aaPredicted RBP13.22□□□□□ -0.29
ATG4B-220ENST00000482507 H1FNTQ75WM6 255 aaPredicted RBP13.22□□□□□ -0.29
ATG4B-220ENST00000482507 COX15Q7KZN9 410 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 ZNF248Q8NDW4 579 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 RHBDD1Q8TEB9 315 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 ASB13Q8WXK3 278 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 PTX4Q96A99 478 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 ZNF75AQ96N20 296 aa13.22□□□□□ -0.29
ATG4B-220ENST00000482507 NOP16Q9Y3C1 178 aaKnown RBP13.22□□□□□ -0.29
ATG4B-220ENST00000482507 ASCC3Q8N3C0 2202 aaKnown RBP13.22□□□□□ -0.29
ATG4B-220ENST00000482507 A0A1B0GX78 115 aa13.21□□□□□ -0.29
ATG4B-220ENST00000482507 RNF222A6NCQ9 220 aa13.21□□□□□ -0.29
ATG4B-220ENST00000482507 A6NIZ1 184 aa13.21□□□□□ -0.29
ATG4B-220ENST00000482507 NUPL2O15504 423 aaKnown RBP13.21□□□□□ -0.29
ATG4B-220ENST00000482507 DUX1O43812 170 aa13.21□□□□□ -0.29
ATG4B-220ENST00000482507 GDF9O60383 454 aa13.21□□□□□ -0.29
ATG4B-220ENST00000482507 H2BFMP0C1H6 154 aa13.21□□□□□ -0.29
ATG4B-220ENST00000482507 VSIG8P0DPA2 414 aa13.21□□□□□ -0.29
ATG4B-220ENST00000482507 MGMTP16455 207 aa13.21□□□□□ -0.29
ATG4B-220ENST00000482507 NAGAP17050 411 aa13.21□□□□□ -0.29
ATG4B-220ENST00000482507 RAP1BP61224 184 aa13.21□□□□□ -0.29
ATG4B-220ENST00000482507 RAP1AP62834 184 aa13.21□□□□□ -0.29
ATG4B-220ENST00000482507 HSF1Q00613 529 aa13.21□□□□□ -0.29
ATG4B-220ENST00000482507 CLVS2Q5SYC1 327 aa13.21□□□□□ -0.29
ATG4B-220ENST00000482507 TMEM244Q5VVB8 128 aa13.21□□□□□ -0.29
ATG4B-220ENST00000482507 APCDD1LQ8NCL9 501 aa13.21□□□□□ -0.29
ATG4B-220ENST00000482507 C11orf40Q8WZ69 217 aa13.21□□□□□ -0.29
ATG4B-220ENST00000482507 FN3KRPQ9HA64 309 aa13.21□□□□□ -0.29
ATG4B-220ENST00000482507 BARX1Q9HBU1 254 aaPredicted RBP13.21□□□□□ -0.29
ATG4B-220ENST00000482507 TNFSF18Q9UNG2 199 aa13.21□□□□□ -0.29
ATG4B-220ENST00000482507 CELSR3Q9NYQ7 3312 aa13.21□□□□□ -0.29
ATG4B-220ENST00000482507 OR6C76A6NM76 312 aa13.21□□□□□ -0.3
ATG4B-220ENST00000482507 OR2AT4A6NND4 320 aa13.21□□□□□ -0.3
ATG4B-220ENST00000482507 RAB6AP20340 208 aa13.21□□□□□ -0.3
ATG4B-220ENST00000482507 CD96P40200 585 aa13.21□□□□□ -0.3
ATG4B-220ENST00000482507 MMP16P51512 607 aa13.21□□□□□ -0.3
ATG4B-220ENST00000482507 ATP1B3P54709 279 aa13.21□□□□□ -0.3
ATG4B-220ENST00000482507 FOXF1Q12946 379 aa13.21□□□□□ -0.3
ATG4B-220ENST00000482507 ATXN7L3Q14CW9 347 aaPredicted RBP13.21□□□□□ -0.3
ATG4B-220ENST00000482507 SLC25A42Q86VD7 318 aa13.21□□□□□ -0.3
ATG4B-220ENST00000482507 KCNRGQ8N5I3 272 aa13.21□□□□□ -0.3
ATG4B-220ENST00000482507 EIF4E3Q8N5X7 224 aaKnown RBP13.21□□□□□ -0.3
ATG4B-220ENST00000482507 NKAIN3Q8N8D7 197 aa13.21□□□□□ -0.3
ATG4B-220ENST00000482507 IFI44Q8TCB0 444 aa13.21□□□□□ -0.3
ATG4B-220ENST00000482507 ZBTB8AQ96BR9 441 aa13.21□□□□□ -0.3
ATG4B-220ENST00000482507 SOX7Q9BT81 388 aa13.21□□□□□ -0.3
ATG4B-220ENST00000482507 TMEM185BQ9H7F4 350 aa13.21□□□□□ -0.3
ATG4B-220ENST00000482507 RASL12Q9NYN1 266 aa13.21□□□□□ -0.3
ATG4B-220ENST00000482507 ZNF107Q9UII5 783 aaPredicted RBP13.21□□□□□ -0.3
ATG4B-220ENST00000482507 RAB22AQ9UL26 194 aa13.21□□□□□ -0.3
ATG4B-220ENST00000482507 ANKUB1A6NFN9 424 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 H3BML4 177 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 YKT6O15498 198 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 UBCP0CG48 685 aaKnown RBP13.2□□□□□ -0.3
ATG4B-220ENST00000482507 GNB3P16520 340 aa13.2□□□□□ -0.3
ATG4B-220ENST00000482507 BDKRB2P30411 391 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms