RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 FGF23Q9GZV9 251 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-210ENST00000482158 LYRM4Q9HD34 91 aa3.17□□□□□ -1.9
SF3B1-210ENST00000482158 PDP1Q9P0J1 537 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-210ENST00000482158 SLC17A7Q9P2U7 560 aa3.17□□□□□ -1.9
SF3B1-210ENST00000482158 EIF4G1Q04637 1599 aaKnown RBP3.17□□□□□ -1.9
SF3B1-210ENST00000482158 TRAV25A0A0B4J276 109 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 NME4O00746 187 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 NMT2O60551 498 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 FCN3O75636 299 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 SEMA3DO95025 777 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 FGFR1OPO95684 399 aaKnown RBP3.16□□□□□ -1.9
SF3B1-210ENST00000482158 CCNE2O96020 404 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 USF1P22415 310 aaPredicted RBP3.16□□□□□ -1.9
SF3B1-210ENST00000482158 IL32P24001 234 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 TNFSF9P41273 254 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 SLC1A2P43004 574 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 CXCL12P48061 93 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 RPS15AP62244 130 aaKnown RBP3.16□□□□□ -1.9
SF3B1-210ENST00000482158 CDC20Q12834 499 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 IL18Q14116 193 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 TCEAL5Q5H9L2 206 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 STUMQ69YW2 141 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 ZNF880Q6PDB4 577 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 BHLHA15Q7RTS1 189 aaPredicted RBP3.16□□□□□ -1.9
SF3B1-210ENST00000482158 NKAIN4Q8IVV8 208 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 JAGN1Q8N5M9 183 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 C8orf31Q8N9H6 132 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 GPR26Q8NDV2 337 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 OR6Q1Q8NGQ2 317 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 ANP32BQ92688 251 aaKnown RBP3.16□□□□□ -1.9
SF3B1-210ENST00000482158 TCEAL3Q969E4 200 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 OR10C1Q96KK4 312 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 HSD17B10Q99714 261 aaKnown RBP3.16□□□□□ -1.9
SF3B1-210ENST00000482158 HYOU1Q9Y4L1 999 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 UNC13AQ9UPW8 1703 aa3.16□□□□□ -1.9
SF3B1-210ENST00000482158 ERICH4A6NGS2 130 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 H7C0C1 242 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 M0R3G1 203 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 GABRPO00591 440 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 BCKDKO14874 412 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 HPRT1P00492 218 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 HLA-HP01893 362 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 ZNF806P0C7X5 589 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 PGA4P0DJD7 388 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 PGA3P0DJD8 388 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 PGA5P0DJD9 388 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 LOXP28300 417 aaPredicted RBP3.15□□□□□ -1.91
SF3B1-210ENST00000482158 RFC3P40938 356 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 RBM34P42696 430 aaKnown RBP3.15□□□□□ -1.91
SF3B1-210ENST00000482158 SERPINB8P50452 374 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 RPL23P62829 140 aaKnown RBP3.15□□□□□ -1.91
SF3B1-210ENST00000482158 TRMT5Q32P41 509 aaKnown RBP3.15□□□□□ -1.91
SF3B1-210ENST00000482158 COX19Q49B96 90 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 MPV17L2Q567V2 206 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 C16orf87Q6PH81 154 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 SNX20Q7Z614 316 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 KATNAL2Q8IYT4 538 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 BPIFCQ8NFQ6 507 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 LINC01560Q8TB33 94 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 RPEQ96AT9 228 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 L3HYPDHQ96EM0 354 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 MRM3Q9HC36 420 aaKnown RBP3.15□□□□□ -1.91
SF3B1-210ENST00000482158 MED4Q9NPJ6 270 aa3.15□□□□□ -1.91
SF3B1-210ENST00000482158 RABL2AQ9UBK7 228 aaPredicted RBP3.15□□□□□ -1.91
SF3B1-210ENST00000482158 SCN1AP35498 2009 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 SMIM26A0A096LP01 95 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 TSPAN11A1L157 253 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 C7orf66A4D0T2 115 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 PDZK1P1A8MUH7 402 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 KRBOX1C9JBD0 128 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 BOLA2-SMG1P6H3BVE0 249 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 CASQ2O14958 399 aaPredicted RBP3.14□□□□□ -1.91
SF3B1-210ENST00000482158 IFNW1P05000 195 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 C1GALT1C1LP0DN25 315 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 SFTPCP11686 197 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 BMI1P35226 326 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 ANP32AP39687 249 aaKnown RBP3.14□□□□□ -1.91
SF3B1-210ENST00000482158 CRADDP78560 199 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 CDK5Q00535 292 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 ZNF816Q0VGE8 651 aaPredicted RBP3.14□□□□□ -1.91
SF3B1-210ENST00000482158 RNASE13Q5GAN3 156 aaKnown RBP3.14□□□□□ -1.91
SF3B1-210ENST00000482158 ZFP1Q6P2D0 407 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 OSR2Q8N2R0 312 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 SNX31Q8N9S9 440 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 OR5AR1Q8NGP9 310 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 C17orf50Q8WW18 174 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 UQCC2Q9BRT2 126 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 GGTLC1Q9BX51 225 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 SLIRPQ9GZT3 109 aaKnown RBP3.14□□□□□ -1.91
SF3B1-210ENST00000482158 TMEM27Q9HBJ8 222 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 C8orf17Q9NRJ1 99 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 SLC39A1Q9NY26 324 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 AHSPQ9NZD4 102 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 COMMD3-BMI1R4GMX3 469 aa3.14□□□□□ -1.91
SF3B1-210ENST00000482158 ZBTB5O15062 677 aa3.13□□□□□ -1.91
SF3B1-210ENST00000482158 ERI3O43414 337 aaKnown RBP3.13□□□□□ -1.91
SF3B1-210ENST00000482158 CD74P04233 296 aa3.13□□□□□ -1.91
SF3B1-210ENST00000482158 ASGR1P07306 291 aa3.13□□□□□ -1.91
SF3B1-210ENST00000482158 GABRG2P18507 467 aa3.13□□□□□ -1.91
SF3B1-210ENST00000482158 FABP6P51161 128 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms