RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 ACTBP60709 375 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 ACTG1P63261 375 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 DEFB134Q4QY38 66 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 VWA2Q5GFL6 755 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 Q5PR19 223 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 LEG1Q6P5S2 330 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 BAP18Q8IXM2 172 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 OR13H1Q8NG92 308 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 PHOSPHO2Q8TCD6 241 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 RNASE8Q8TDE3 154 aaKnown RBP9.1□□□□□ -0.95
COMMD4-203ENST00000480484 ASB13Q8WXK3 278 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 CFHR4Q92496 578 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 ISOC2Q96AB3 205 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 NRIP2Q9BQI9 281 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 PAPOLGQ9BWT3 736 aaKnown RBP9.1□□□□□ -0.95
COMMD4-203ENST00000480484 SEMA6CQ9H3T2 930 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 RHOFQ9HBH0 211 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 FGF22Q9HCT0 170 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 RPS10P5Q9NQ39 176 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 FAM212BQ9NTI7 297 aaPredicted RBP9.1□□□□□ -0.95
COMMD4-203ENST00000480484 DNAJB11Q9UBS4 358 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 CSAG2Q9Y5P2 127 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 ST8SIA5O15466 376 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 P2RX6O15547 441 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 LY86O95711 162 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 DDAH2O95865 285 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 TACSTD2P09758 323 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 AKR1C4P17516 323 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 HNRNPA2B1P22626 353 aaKnown RBP9.1□□□□□ -0.95
COMMD4-203ENST00000480484 CCKBRP32239 447 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 ADAM8P78325 824 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 TFF2Q03403 129 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 RD3Q7Z3Z2 195 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 ZNF679Q8IYX0 411 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 RAB42Q8N4Z0 105 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 OR4K17Q8NGC6 315 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 FAM3DQ96BQ1 224 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 FOXRED1Q96CU9 486 aaPredicted RBP9.1□□□□□ -0.95
COMMD4-203ENST00000480484 PIK3IP1Q96FE7 263 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 ALG12Q9BV10 488 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 LAT2Q9GZY6 243 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 ALX4Q9H161 411 aaPredicted RBP9.1□□□□□ -0.95
COMMD4-203ENST00000480484 C1orf198Q9H425 327 aa9.1□□□□□ -0.95
COMMD4-203ENST00000480484 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.1□□□□□ -0.95
COMMD4-203ENST00000480484 STRAPQ9Y3F4 350 aaKnown RBP9.1□□□□□ -0.95
COMMD4-203ENST00000480484 A0A1B0GTI1 187 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 ZNF736B4DX44 427 aaPredicted RBP9.09□□□□□ -0.95
COMMD4-203ENST00000480484 HSBP1L1C9JCN9 74 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 TNFSF14O43557 240 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 CDC40O60508 579 aaKnown RBP eCLIP9.09□□□□□ -0.95
COMMD4-203ENST00000480484 SRPX2O60687 465 aaPredicted RBP9.09□□□□□ -0.95
COMMD4-203ENST00000480484 THBS1P07996 1170 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 CT62P0C5K7 136 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 RBM34P42696 430 aaKnown RBP9.09□□□□□ -0.95
COMMD4-203ENST00000480484 IL13RA1P78552 427 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 PJVKQ0ZLH3 352 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 PPP1R1AQ13522 171 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 EIF2B1Q14232 305 aaKnown RBP9.09□□□□□ -0.95
COMMD4-203ENST00000480484 CXorf67Q86X51 503 aaPredicted RBP9.09□□□□□ -0.95
COMMD4-203ENST00000480484 MCEMP1Q8IX19 187 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 YAF2Q8IY57 180 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 NPEPL1Q8NDH3 523 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 PFDN5Q99471 154 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 SLC25A21Q9BQT8 299 aaPredicted RBP9.09□□□□□ -0.95
COMMD4-203ENST00000480484 MMP26Q9NRE1 261 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 SMCO4Q9NRQ5 59 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 PHPT1Q9NRX4 125 aaPredicted RBP9.09□□□□□ -0.95
COMMD4-203ENST00000480484 TMEM140Q9NV12 185 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 PADI1Q9ULC6 663 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 FITM1A5D6W6 292 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 BLOC1S5-TXNDC5H3BN57 136 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 K7EQS6 105 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 FGF16O43320 207 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 CD1AP06126 327 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 ZNF888P0CJ79 500 aaPredicted RBP9.09□□□□□ -0.95
COMMD4-203ENST00000480484 PVRP15151 417 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 CD80P33681 288 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 GABRA3P34903 492 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 EMDP50402 254 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 CXADRP78310 365 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 FAM76BQ5HYJ3 339 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 DNM1P46Q6ZS02 220 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 OR2L3Q8NG85 312 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 BAHD1Q8TBE0 780 aaPredicted RBP9.09□□□□□ -0.95
COMMD4-203ENST00000480484 SLC6A7Q99884 636 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 SRSF8Q9BRL6 282 aaKnown RBP9.09□□□□□ -0.95
COMMD4-203ENST00000480484 COMMD4Q9H0A8 199 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 RCC2Q9P258 522 aaKnown RBP9.09□□□□□ -0.95
COMMD4-203ENST00000480484 MRM2Q9UI43 246 aaKnown RBP9.09□□□□□ -0.95
COMMD4-203ENST00000480484 SERTAD3Q9UJW9 196 aa9.09□□□□□ -0.95
COMMD4-203ENST00000480484 TDRD6O60522 2096 aaKnown RBP9.09□□□□□ -0.95
COMMD4-203ENST00000480484 PRRC2CQ9Y520 2896 aaKnown RBP9.09□□□□□ -0.95
COMMD4-203ENST00000480484 APODP05090 189 aa9.09□□□□□ -0.96
COMMD4-203ENST00000480484 PGDP52209 483 aa9.09□□□□□ -0.96
COMMD4-203ENST00000480484 OR2B8PP59922 312 aa9.09□□□□□ -0.96
COMMD4-203ENST00000480484 CLN3Q13286 438 aa9.09□□□□□ -0.96
COMMD4-203ENST00000480484 FHL1Q13642 323 aa9.09□□□□□ -0.96
COMMD4-203ENST00000480484 RAB11BQ15907 218 aa9.09□□□□□ -0.96
COMMD4-203ENST00000480484 ZIC1Q15915 447 aa9.09□□□□□ -0.96
COMMD4-203ENST00000480484 PRICKLE4Q2TBC4 344 aa9.09□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms