RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 PRRC2AP48634 2157 aaKnown RBP4.19□□□□□ -1.74
PTCD3-213ENST00000480102 NAV3Q8IVL0 2385 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 HEATR5AQ86XA9 2040 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 A0A1W2PRX2 142 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 OR6C68A6NDL8 312 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 ACOD1A6NK06 481 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 RIIAD1A6NNX1 92 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 C17orf100A8MU93 164 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 FKBP6O75344 327 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 SLC2A10O95528 541 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 IGFBP1P08833 259 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-213ENST00000480102 RPSAP08865 295 aaKnown RBP4.18□□□□□ -1.74
PTCD3-213ENST00000480102 CD79AP11912 226 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 HIST1H1CP16403 213 aaKnown RBP4.18□□□□□ -1.74
PTCD3-213ENST00000480102 SELEP16581 610 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 ZNF3P17036 446 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 ZNF32P17041 273 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 CDH2P19022 906 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-213ENST00000480102 PCMT1P22061 227 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 PAICSP22234 425 aaKnown RBP4.18□□□□□ -1.74
PTCD3-213ENST00000480102 CFL1P23528 166 aaKnown RBP4.18□□□□□ -1.74
PTCD3-213ENST00000480102 FASP25445 335 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 THBS4P35443 961 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 DDOSTP39656 456 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 CDKN2AP42771 156 aaKnown RBP4.18□□□□□ -1.74
PTCD3-213ENST00000480102 SLC15A1P46059 708 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 YAP1P46937 504 aaKnown RBP4.18□□□□□ -1.74
PTCD3-213ENST00000480102 PDLIM4P50479 330 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 MMP15P51511 669 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 KLF3P57682 345 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-213ENST00000480102 ACTR3P61158 418 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 CDK5Q00535 292 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 MYBPC1Q00872 1141 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 SLC3A1Q07837 685 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 SPOCK1Q08629 439 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 SF3A3Q12874 501 aaKnown RBP eCLIP4.18□□□□□ -1.743e-6■□□□□ 8.7
PTCD3-213ENST00000480102 MALLQ13021 153 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 SNTB2Q13425 540 aaKnown RBP4.18□□□□□ -1.74
PTCD3-213ENST00000480102 MELKQ14680 651 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 ZNF718Q3SXZ3 478 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 PABPC1L2AQ5JQF8 200 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 ELFN2Q5R3F8 820 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 C9orf135Q5VTT2 229 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 CARD17Q5XLA6 110 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 KDM4DQ6B0I6 523 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 RGS7BPQ6MZT1 257 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-213ENST00000480102 SLC27A4Q6P1M0 643 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 DRAM2Q6UX65 266 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 PTCHD4Q6ZW05 846 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 SHFQ7M4L6 423 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 MYPOPQ86VE0 399 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-213ENST00000480102 AQP11Q8NBQ7 271 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 OR52J3Q8NH60 311 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 SYNPRQ8TBG9 265 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 TEX47Q8TBZ9 253 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 PTP4A1Q93096 173 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 APOBEC3DQ96AK3 386 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-213ENST00000480102 HAVCR1Q96D42 359 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 DNAJA3Q96EY1 480 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 CENPNQ96H22 339 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-213ENST00000480102 C4orf45Q96LM5 186 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 Q96MF0 132 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 ERMAPQ96PL5 475 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-213ENST00000480102 GPHA2Q96T91 129 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 FEVQ99581 238 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 RHNO1Q9BSD3 238 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 KRTAP9-8Q9BYQ0 159 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 REG4Q9BYZ8 158 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 NUAK2Q9H093 628 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 WNT5BQ9H1J7 359 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 RGCCQ9H4X1 137 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 NIPAL2Q9H841 368 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 CHODLQ9H9P2 273 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 ZNF556Q9HAH1 456 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 NTN4Q9HB63 628 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 CDH20Q9HBT6 801 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 AP4S1Q9Y587 144 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 IER3IP1Q9Y5U9 82 aa4.18□□□□□ -1.74
PTCD3-213ENST00000480102 NSD1Q96L73 2696 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-213ENST00000480102 VPS13CQ709C8 3753 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 FLNAP21333 2647 aaKnown RBP4.17□□□□□ -1.74
PTCD3-213ENST00000480102 LOC100509620A0A075B734 347 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 A0A1W2PR80 420 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 E9PQ18 207 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 EBAG9O00559 213 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 SURF4O15260 269 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 SGCEO43556 437 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 CD5LO43866 347 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 SLC16A7O60669 478 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 RP2O75695 350 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 SERPINI2O75830 405 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 TOX4O94842 621 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 GLCEO94923 617 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 DIRAS1O95057 198 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 TFP02787 698 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 ATP6V1B1P15313 513 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 USF1P22415 310 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-213ENST00000480102 GCH1P30793 250 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 FMO3P31513 532 aa4.17□□□□□ -1.74
PTCD3-213ENST00000480102 WNT5AP41221 380 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms