RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 CPEP16870 476 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 HSD11B1P28845 292 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 MAGEB1P43366 347 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 GDI2P50395 445 aaKnown RBP11.32□□□□□ -0.6
CHD3-210ENST00000479080 GBX2P52951 348 aaPredicted RBP11.32□□□□□ -0.6
CHD3-210ENST00000479080 RPS11P62280 158 aaKnown RBP eCLIP11.32□□□□□ -0.6
CHD3-210ENST00000479080 RPS25P62851 125 aaKnown RBP11.32□□□□□ -0.6
CHD3-210ENST00000479080 NAAAQ02083 359 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 TAF13Q15543 124 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 LIPKQ5VXJ0 399 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 DRAM2Q6UX65 266 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 FAM57BQ71RH2 274 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 FAM220AQ7Z4H9 259 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 PHC2Q8IXK0 858 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 PDCD1LG2Q9BQ51 273 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 PBOV1Q9GZY1 135 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 NIPAL2Q9H841 368 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 BRD7Q9NPI1 651 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 TRIM36Q9NQ86 728 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 NUFIP1Q9UHK0 495 aaKnown RBP11.32□□□□□ -0.6
CHD3-210ENST00000479080 SCOCQ9UIL1 159 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 OR52A1Q9UKL2 312 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 NAV2Q8IVL1 2488 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 A0A1B0GTI1 187 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 IQCMA0A1B0GVH7 501 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 PLPP2O43688 288 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 ZFPL1O95159 310 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 CLDN1O95832 211 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 TACSTD2P09758 323 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 HSMCR30P0CW71 290 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 PPP3CBP16298 524 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 CELP19835 753 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 CD40P25942 277 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 APLNRP35414 380 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 CCR9P51686 369 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 NR1H2P55055 460 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 TPTEP56180 551 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 PRSS12P56730 875 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 ERVS71-1P61550 626 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 PLP2Q04941 152 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 TNK1Q13470 666 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 INSL4Q14641 139 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 ZNF829Q3KNS6 432 aaPredicted RBP11.31□□□□□ -0.6
CHD3-210ENST00000479080 CCDC58Q4VC31 144 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 GLYATL3Q5SZD4 288 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 C1QTNF12Q5T7M4 302 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 RPL22L1Q6P5R6 122 aaKnown RBP11.31□□□□□ -0.6
CHD3-210ENST00000479080 ARL9Q6T311 187 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.31□□□□□ -0.6
CHD3-210ENST00000479080 DMRTC2Q8IXT2 367 aaPredicted RBP11.31□□□□□ -0.6
CHD3-210ENST00000479080 ELMOD2Q8IZ81 293 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 ALDH16A1Q8IZ83 802 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 RDH10Q8IZV5 341 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 OR2AE1Q8NHA4 323 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 SPTSSAQ969W0 71 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 MUCL1Q96DR8 90 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 SMIM19Q96E16 107 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 MRPL48Q96GC5 212 aaKnown RBP11.31□□□□□ -0.6
CHD3-210ENST00000479080 USB1Q9BQ65 265 aaKnown RBP11.31□□□□□ -0.6
CHD3-210ENST00000479080 MED18Q9BUE0 208 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 NAA50Q9GZZ1 169 aaKnown RBP11.31□□□□□ -0.6
CHD3-210ENST00000479080 CRIM1Q9NZV1 1036 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 STARD10Q9Y365 291 aa11.31□□□□□ -0.6
CHD3-210ENST00000479080 DEFB108AA8MXU0 73 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 ATP6V1G2-DDX39BF2Z307 99 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 H3BSH0 61 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 P2RY10O00398 339 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 LMX1BO60663 402 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 CD1AP06126 327 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 ANXA2P07355 339 aaKnown RBP11.3□□□□□ -0.6
CHD3-210ENST00000479080 CCNOP22674 350 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 RPL5P46777 297 aaKnown RBP11.3□□□□□ -0.6
CHD3-210ENST00000479080 RGS6P49758 472 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 SLC3A1Q07837 685 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 TBC1D28Q2M2D7 210 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 ODF4Q2M2E3 257 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 NCMAPQ5T1S8 102 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 Q6ZSR3 168 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 SATL1Q86VE3 508 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 OR51A4Q8NGJ6 313 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 SSC4DQ8WTU2 575 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 GHSRQ92847 366 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 SGK3Q96BR1 496 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 HS3ST6Q96QI5 342 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 OR51B6Q9H340 312 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 NDUFB11Q9NX14 153 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 N6AMT1Q9Y5N5 214 aa11.3□□□□□ -0.6
CHD3-210ENST00000479080 TRBV5-5A0A0J9YX44 114 aa11.29□□□□□ -0.6
CHD3-210ENST00000479080 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.29□□□□□ -0.6
CHD3-210ENST00000479080 LOC107986453A0A1B0GWG9 222 aa11.29□□□□□ -0.6
CHD3-210ENST00000479080 GPRIN2O60269 458 aa11.29□□□□□ -0.6
CHD3-210ENST00000479080 SC5DO75845 299 aa11.29□□□□□ -0.6
CHD3-210ENST00000479080 LCATP04180 440 aa11.29□□□□□ -0.6
CHD3-210ENST00000479080 FAM157BP0CG42 384 aa11.29□□□□□ -0.6
CHD3-210ENST00000479080 CCL1P22362 96 aa11.29□□□□□ -0.6
CHD3-210ENST00000479080 SLC6A9P48067 706 aa11.29□□□□□ -0.6
CHD3-210ENST00000479080 TAS2R43P59537 309 aa11.29□□□□□ -0.6
CHD3-210ENST00000479080 NKX6-1P78426 367 aaPredicted RBP11.29□□□□□ -0.6
CHD3-210ENST00000479080 BSPH1Q075Z2 132 aa11.29□□□□□ -0.6
CHD3-210ENST00000479080 MRPL28Q13084 256 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms