RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 TEX13CA0A0J9YWL9 993 aa14.14□□□□□ -0.15
VIM-204ENST00000478746 ECDO95905 644 aaPredicted RBP14.14□□□□□ -0.15
VIM-204ENST00000478746 CTLA4P16410 223 aa14.14□□□□□ -0.15
VIM-204ENST00000478746 RPL4P36578 427 aaKnown RBP14.14□□□□□ -0.15
VIM-204ENST00000478746 RAD23AP54725 363 aa14.14□□□□□ -0.15
VIM-204ENST00000478746 ST3GAL3Q11203 375 aa14.14□□□□□ -0.15
VIM-204ENST00000478746 FHL1Q13642 323 aa14.14□□□□□ -0.15
VIM-204ENST00000478746 ANKDD1AQ495B1 522 aa14.14□□□□□ -0.15
VIM-204ENST00000478746 OXLD1Q5BKU9 147 aa14.14□□□□□ -0.15
VIM-204ENST00000478746 VMO1Q7Z5L0 202 aa14.14□□□□□ -0.15
VIM-204ENST00000478746 SGCDQ92629 289 aa14.14□□□□□ -0.15
VIM-204ENST00000478746 SEMA6AQ9H2E6 1030 aa14.14□□□□□ -0.15
VIM-204ENST00000478746 FN3KRPQ9HA64 309 aa14.14□□□□□ -0.15
VIM-204ENST00000478746 TRIM36Q9NQ86 728 aa14.14□□□□□ -0.15
VIM-204ENST00000478746 ZNRD1Q9P1U0 126 aa14.14□□□□□ -0.15
VIM-204ENST00000478746 COA3Q9Y2R0 106 aaPredicted RBP14.14□□□□□ -0.15
VIM-204ENST00000478746 RYR3Q15413 4870 aa14.14□□□□□ -0.15
VIM-204ENST00000478746 PRSS37A4D1T9 235 aa14.13□□□□□ -0.15
VIM-204ENST00000478746 ANGPT2O15123 496 aa14.13□□□□□ -0.15
VIM-204ENST00000478746 OR10H3O60404 316 aa14.13□□□□□ -0.15
VIM-204ENST00000478746 GABRA5P31644 462 aa14.13□□□□□ -0.15
VIM-204ENST00000478746 GZMMP51124 257 aa14.13□□□□□ -0.15
VIM-204ENST00000478746 PRSS12P56730 875 aa14.13□□□□□ -0.15
VIM-204ENST00000478746 C11orf91Q3C1V1 193 aa14.13□□□□□ -0.15
VIM-204ENST00000478746 CDONQ4KMG0 1287 aa14.13□□□□□ -0.15
VIM-204ENST00000478746 GLB1L2Q8IW92 636 aa14.13□□□□□ -0.15
VIM-204ENST00000478746 C11orf44Q8N8P7 122 aa14.13□□□□□ -0.15
VIM-204ENST00000478746 Q96M85 177 aa14.13□□□□□ -0.15
VIM-204ENST00000478746 PPA2Q9H2U2 334 aa14.13□□□□□ -0.15
VIM-204ENST00000478746 NECAP2Q9NVZ3 263 aa14.13□□□□□ -0.15
VIM-204ENST00000478746 ADAM18Q9Y3Q7 739 aa14.13□□□□□ -0.15
VIM-204ENST00000478746 KPTNQ9Y664 436 aa14.13□□□□□ -0.15
VIM-204ENST00000478746 A0A1B0GVI7 797 aa14.12□□□□□ -0.15
VIM-204ENST00000478746 EFCAB9A8MZ26 197 aa14.12□□□□□ -0.15
VIM-204ENST00000478746 DVL1O14640 695 aa14.12□□□□□ -0.15
VIM-204ENST00000478746 SLC16A7O60669 478 aa14.12□□□□□ -0.15
VIM-204ENST00000478746 KHDRBS3O75525 346 aaKnown RBP14.12□□□□□ -0.15
VIM-204ENST00000478746 GYPAP02724 150 aa14.12□□□□□ -0.15
VIM-204ENST00000478746 IFNA8P32881 189 aa14.12□□□□□ -0.15
VIM-204ENST00000478746 NFYCQ13952 458 aa14.12□□□□□ -0.15
VIM-204ENST00000478746 OR8G1Q15617 311 aa14.12□□□□□ -0.15
VIM-204ENST00000478746 MESTQ5EB52 335 aa14.12□□□□□ -0.15
VIM-204ENST00000478746 NRMQ8IXM6 262 aa14.12□□□□□ -0.15
VIM-204ENST00000478746 GJC3Q8NFK1 279 aa14.12□□□□□ -0.15
VIM-204ENST00000478746 COQ7Q99807 217 aa14.12□□□□□ -0.15
VIM-204ENST00000478746 AURKAIP1Q9NWT8 199 aaPredicted RBP14.12□□□□□ -0.15
VIM-204ENST00000478746 FOXJ3Q9UPW0 622 aa14.12□□□□□ -0.15
VIM-204ENST00000478746 POLR1DQ9Y2S0 133 aa14.12□□□□□ -0.15
VIM-204ENST00000478746 SIGLEC9Q9Y336 463 aa14.12□□□□□ -0.15
VIM-204ENST00000478746 OOEPA6NGQ2 149 aa14.11□□□□□ -0.15
VIM-204ENST00000478746 RNASEK-C17orf49H0YIS7 233 aa14.11□□□□□ -0.15
VIM-204ENST00000478746 XPNPEP2O43895 674 aa14.11□□□□□ -0.15
VIM-204ENST00000478746 IFNA14P01570 189 aa14.11□□□□□ -0.15
VIM-204ENST00000478746 CD14P08571 375 aa14.11□□□□□ -0.15
VIM-204ENST00000478746 EEF1B2P24534 225 aaKnown RBP14.11□□□□□ -0.15
VIM-204ENST00000478746 SLC9A3P48764 834 aa14.11□□□□□ -0.15
VIM-204ENST00000478746 PRKCDQ05655 676 aa14.11□□□□□ -0.15
VIM-204ENST00000478746 DBPQ10586 325 aaPredicted RBP14.11□□□□□ -0.15
VIM-204ENST00000478746 GK2Q14410 553 aaPredicted RBP14.11□□□□□ -0.15
VIM-204ENST00000478746 RSPO1Q2MKA7 263 aaPredicted RBP14.11□□□□□ -0.15
VIM-204ENST00000478746 COLCA1Q6ZS62 124 aa14.11□□□□□ -0.15
VIM-204ENST00000478746 SPERTQ8NA61 448 aa14.11□□□□□ -0.15
VIM-204ENST00000478746 OR13C2Q8NGS9 318 aa14.11□□□□□ -0.15
VIM-204ENST00000478746 OR5R1Q8NH85 324 aa14.11□□□□□ -0.15
VIM-204ENST00000478746 SPRYD4Q8WW59 207 aaPredicted RBP14.11□□□□□ -0.15
VIM-204ENST00000478746 DYDC1Q8WWB3 177 aa14.11□□□□□ -0.15
VIM-204ENST00000478746 ST8SIA4Q92187 359 aa14.11□□□□□ -0.15
VIM-204ENST00000478746 SLCO4A1Q96BD0 722 aa14.11□□□□□ -0.15
VIM-204ENST00000478746 ZNF570Q96NI8 536 aa14.11□□□□□ -0.15
VIM-204ENST00000478746 HDHD2Q9H0R4 259 aa14.11□□□□□ -0.15
VIM-204ENST00000478746 ONECUT1Q9UBC0 465 aa14.11□□□□□ -0.15
VIM-204ENST00000478746 RPUSD1Q9UJJ7 312 aaKnown RBP14.11□□□□□ -0.15
VIM-204ENST00000478746 RPS6KA6Q9UK32 745 aa14.11□□□□□ -0.15
VIM-204ENST00000478746 NOP16Q9Y3C1 178 aaKnown RBP14.11□□□□□ -0.15
VIM-204ENST00000478746 FCN3O75636 299 aa14.1□□□□□ -0.15
VIM-204ENST00000478746 VSIG8P0DPA2 414 aa14.1□□□□□ -0.15
VIM-204ENST00000478746 CA6P23280 308 aa14.1□□□□□ -0.15
VIM-204ENST00000478746 HIST1H3AP68431 136 aa14.1□□□□□ -0.15
VIM-204ENST00000478746 GUCA2AQ02747 115 aa14.1□□□□□ -0.15
VIM-204ENST00000478746 POU4F2Q12837 409 aa14.1□□□□□ -0.15
VIM-204ENST00000478746 MALLQ13021 153 aa14.1□□□□□ -0.15
VIM-204ENST00000478746 KCNMB1Q16558 191 aa14.1□□□□□ -0.15
VIM-204ENST00000478746 HIST2H3PS2Q5TEC6 136 aa14.1□□□□□ -0.15
VIM-204ENST00000478746 METAP1DQ6UB28 335 aaPredicted RBP14.1□□□□□ -0.15
VIM-204ENST00000478746 C1orf122Q6ZSJ8 110 aa14.1□□□□□ -0.15
VIM-204ENST00000478746 HIST2H3AQ71DI3 136 aa14.1□□□□□ -0.15
VIM-204ENST00000478746 PLPP7Q8NBV4 271 aa14.1□□□□□ -0.15
VIM-204ENST00000478746 CFHR4Q92496 578 aa14.1□□□□□ -0.15
VIM-204ENST00000478746 ITPKCQ96DU7 683 aa14.1□□□□□ -0.15
VIM-204ENST00000478746 SLC22A4Q9H015 551 aa14.1□□□□□ -0.15
VIM-204ENST00000478746 SYT4Q9H2B2 425 aa14.1□□□□□ -0.15
VIM-204ENST00000478746 INTS9Q9NV88 658 aaKnown RBP14.1□□□□□ -0.15
VIM-204ENST00000478746 A4GNTQ9UNA3 340 aa14.1□□□□□ -0.15
VIM-204ENST00000478746 A0A1W2PRD5 423 aa14.09□□□□□ -0.15
VIM-204ENST00000478746 A0A1W2PRF3 423 aa14.09□□□□□ -0.15
VIM-204ENST00000478746 A0A1W2PRM7 423 aa14.09□□□□□ -0.15
VIM-204ENST00000478746 NPFFO15130 113 aa14.09□□□□□ -0.15
VIM-204ENST00000478746 PAHP00439 452 aa14.09□□□□□ -0.15
VIM-204ENST00000478746 KIR2DS4P43632 304 aa14.09□□□□□ -0.15
VIM-204ENST00000478746 CENPAP49450 140 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms