RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	SPI1	P17947	270 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	SRP9	P49458	86 aa	Known RBP	11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	ENTPD1	P49961	510 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	BLVRA	P53004	296 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	FLOT2	Q14254	428 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	GK2	Q14410	553 aa	Predicted RBP	11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	LIPN	Q5VXI9	398 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	DCXR	Q7Z4W1	244 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	SPATA24	Q86W54	205 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	KLHL36	Q8N4N3	616 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	TEX29	Q8N6K0	151 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	ZNF511	Q8NB15	262 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	OR4M2	Q8NGB6	313 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	OR10AD1	Q8NGE0	317 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	OR10S1	Q8NGN2	331 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	OR6K6	Q8NGW6	343 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	SLC30A2	Q9BRI3	323 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	NMNAT2	Q9BZQ4	307 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	YY1AP1	Q9H869	796 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	GCM1	Q9NP62	436 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	G6PC2	Q9NQR9	355 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	CMC2	Q9NRP2	79 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	TMEM100	Q9NV29	134 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	DCAF16	Q9NXF7	216 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	COMMD3-BMI1	R4GMX3	469 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	MXRA5	Q9NR99	2828 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937	COL6A5	A8TX70	2615 aa		11.65	□□□□□ -0.54
HDAC7-222	ENST00000477937		H0YL77	283 aa		11.64	□□□□□ -0.55
HDAC7-222	ENST00000477937	E2F6	O75461	281 aa		11.64	□□□□□ -0.55
HDAC7-222	ENST00000477937	SPARC	P09486	303 aa		11.64	□□□□□ -0.55
HDAC7-222	ENST00000477937	GATA3	P23771	443 aa		11.64	□□□□□ -0.55
HDAC7-222	ENST00000477937	SLC6A9	P48067	706 aa		11.64	□□□□□ -0.55
HDAC7-222	ENST00000477937	SCGB2A2	Q13296	93 aa		11.64	□□□□□ -0.55
HDAC7-222	ENST00000477937	TAF13	Q15543	124 aa		11.64	□□□□□ -0.55
HDAC7-222	ENST00000477937	TEX30	Q5JUR7	227 aa		11.64	□□□□□ -0.55
HDAC7-222	ENST00000477937	LYPD4	Q6UWN0	246 aa		11.64	□□□□□ -0.55
HDAC7-222	ENST00000477937	PGAP1	Q75T13	922 aa		11.64	□□□□□ -0.55
HDAC7-222	ENST00000477937	LRRC28	Q86X40	367 aa	Predicted RBP	11.64	□□□□□ -0.55
HDAC7-222	ENST00000477937	SPIC	Q8N5J4	248 aa		11.64	□□□□□ -0.55
HDAC7-222	ENST00000477937	SLCO4A1	Q96BD0	722 aa		11.64	□□□□□ -0.55
HDAC7-222	ENST00000477937	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	11.64	□□□□□ -0.55
HDAC7-222	ENST00000477937	MEGF10	Q96KG7	1140 aa		11.64	□□□□□ -0.55
HDAC7-222	ENST00000477937	COPS4	Q9BT78	406 aa		11.64	□□□□□ -0.55
HDAC7-222	ENST00000477937	METTL17	Q9H7H0	456 aa	Predicted RBP	11.64	□□□□□ -0.55
HDAC7-222	ENST00000477937	CENPM	Q9NSP4	180 aa		11.64	□□□□□ -0.55
HDAC7-222	ENST00000477937	DDX28	Q9NUL7	540 aa	Known RBP	11.64	□□□□□ -0.55
HDAC7-222	ENST00000477937	PDP1	Q9P0J1	537 aa	Predicted RBP	11.64	□□□□□ -0.55
HDAC7-222	ENST00000477937	TMEM178B	H3BS89	294 aa		11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937		J3QLI3	93 aa		11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	MLNR	O43193	412 aa		11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	TCF21	O43680	179 aa		11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	DNAJC8	O75937	253 aa	Predicted RBP	11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	CLU	P10909	449 aa		11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	POU1F1	P28069	291 aa		11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	OTX1	P32242	354 aa	Predicted RBP	11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	GRK5	P34947	590 aa		11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	BTG1	P62324	171 aa		11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	LCN2	P80188	198 aa		11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	HNRNPA0	Q13151	305 aa	Known RBP	11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	PCK2	Q16822	640 aa		11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	KRTAP24-1	Q3LI83	254 aa		11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	TMEM155	Q4W5P6	130 aa		11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	DCAF12L2	Q5VW00	463 aa		11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	DRAM2	Q6UX65	266 aa		11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	MRPL21	Q7Z2W9	205 aa	Known RBP	11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	TMEM179B	Q7Z7N9	219 aa		11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	OTULIN	Q96BN8	352 aa		11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	SLAMF6	Q96DU3	332 aa		11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	SIGLEC11	Q96RL6	698 aa		11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	OCEL1	Q9H607	264 aa		11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	ZNF556	Q9HAH1	456 aa		11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937	PATZ1	Q9HBE1	687 aa	Known RBP	11.63	□□□□□ -0.55
HDAC7-222	ENST00000477937		A0A1B0GWJ7	208 aa		11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	ZNF878	C9JN71	531 aa		11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937		F5H5P2	479 aa		11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	FOXH1	O75593	365 aa		11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	HLA-DPB1	P04440	258 aa		11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	PSKH1	P11801	424 aa		11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	ANXA8	P13928	327 aa		11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	PAICS	P22234	425 aa	Known RBP	11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	RBMX	P38159	391 aa	Known RBP	11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	MDH2	P40926	338 aa	Known RBP	11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	SLC15A1	P46059	708 aa		11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	MMP16	P51512	607 aa		11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	PRKX	P51817	358 aa		11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	RAD23A	P54725	363 aa		11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	PRSS12	P56730	875 aa		11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	CBX1	P83916	185 aa		11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	ZMYND11	Q15326	602 aa		11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	SNAI3	Q3KNW1	292 aa		11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	C1orf87	Q8N0U7	546 aa		11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	MUC20	Q8N307	709 aa	Predicted RBP	11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	IQCF1	Q8N6M8	205 aa		11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	ZNF420	Q8TAQ5	688 aa	Predicted RBP	11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	SPRYD4	Q8WW59	207 aa	Predicted RBP	11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	INTS14	Q96SY0	518 aa		11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	KCNJ15	Q99712	375 aa		11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	REPIN1	Q9BWE0	567 aa	Known RBP	11.62	□□□□□ -0.55
HDAC7-222	ENST00000477937	TMPRSS13	Q9BYE2	586 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 58 ms