RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 PABPC1L2AQ5JQF8 200 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 PAGE3Q5JUK9 113 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 FAM201AQ5SY85 155 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 C16orf87Q6PH81 154 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 ULK3Q6PHR2 472 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 C5orf46Q6UWT4 87 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 BRD3OSQ6XYD6 125 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 SLC16A14Q7RTX9 510 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 LRRC28Q86X40 367 aaPredicted RBP3.8□□□□□ -1.8
CKS1B-207ENST00000477676 PARP8Q8N3A8 854 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 LRRC18Q8N456 261 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 TEX29Q8N6K0 151 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 ZNF283Q8N7M2 679 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 CLDN22Q8N7P3 220 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 SMYD1Q8NB12 490 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 ICA1LQ8NDH6 482 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 OR6T1Q8NGN1 323 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 AKR7LQ8NHP1 331 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 BBS10Q8TAM1 723 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 KLF14Q8TD94 323 aaPredicted RBP3.8□□□□□ -1.8
CKS1B-207ENST00000477676 MGARPQ8TDB4 240 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 AENQ8WTP8 325 aaKnown RBP3.8□□□□□ -1.8
CKS1B-207ENST00000477676 C10orf82Q8WW14 230 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 C11orf40Q8WZ69 217 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 HDAC2Q92769 488 aaKnown RBP3.8□□□□□ -1.8
CKS1B-207ENST00000477676 RAB1CQ92928 201 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 MCHR2Q969V1 340 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 SLC25A28Q96A46 364 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 SLC47A1Q96FL8 570 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 SLC25A44Q96H78 314 aaPredicted RBP3.8□□□□□ -1.8
CKS1B-207ENST00000477676 MAELQ96JY0 434 aaKnown RBP3.8□□□□□ -1.8
CKS1B-207ENST00000477676 OR52B2Q96RD2 323 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 ARHGDIGQ99819 225 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 PRSS27Q9BQR3 290 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 TMEM43Q9BTV4 400 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 CHIAQ9BZP6 476 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 BCL2L14Q9BZR8 327 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 WNT5BQ9H1J7 359 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 CDH20Q9HBT6 801 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 SEPSECSQ9HD40 501 aaKnown RBP3.8□□□□□ -1.8
CKS1B-207ENST00000477676 B3GAT2Q9NPZ5 323 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 MEPEQ9NQ76 525 aaPredicted RBP3.8□□□□□ -1.8
CKS1B-207ENST00000477676 SDR39U1Q9NRG7 319 aaPredicted RBP3.8□□□□□ -1.8
CKS1B-207ENST00000477676 DECR2Q9NUI1 292 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 C1RLQ9NZP8 487 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 VAPAQ9P0L0 249 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 KIF17Q9P2E2 1029 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 GRHPRQ9UBQ7 328 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 RPS6KB2Q9UBS0 482 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 NDRG4Q9ULP0 352 aaKnown RBP3.8□□□□□ -1.8
CKS1B-207ENST00000477676 BIRC6Q9NR09 4857 aa3.8□□□□□ -1.8
CKS1B-207ENST00000477676 A0A087WWL8 130 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 TRAV40A0A0B4J280 105 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 LOC102723971A0A1B0GUV8 181 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 SLC22A23A1A5C7 686 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 C5orf49A4QMS7 147 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 FAM90A8PA6NJQ4 464 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 CEACAM18A8MTB9 384 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 H0YL77 283 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 KPNA4O00629 521 aaPredicted RBP3.79□□□□□ -1.8
CKS1B-207ENST00000477676 TRMUO75648 421 aaKnown RBP3.79□□□□□ -1.8
CKS1B-207ENST00000477676 SLC22A3O75751 556 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 PRB2P02812 416 aaPredicted RBP3.79□□□□□ -1.8
CKS1B-207ENST00000477676 IL6P05231 212 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 WNT2P09544 360 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 TSPAN19P0C672 248 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 FAM90A13PP0C7W8 464 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 FAM90A24PP0C7X0 464 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 T-ENOLP0DO92 83 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 SELEP16581 610 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 FUT1P19526 365 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 CCNOP22674 350 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 STOMP27105 288 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 AQP1P29972 269 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 PMELP40967 661 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 POLR2JP52435 117 aaKnown RBP3.79□□□□□ -1.8
CKS1B-207ENST00000477676 UGT2B15P54855 530 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 RAG2P55895 527 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 RGS8P57771 180 aaPredicted RBP3.79□□□□□ -1.8
CKS1B-207ENST00000477676 PPP1CBP62140 327 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 VAMP2P63027 116 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 CDK6Q00534 326 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 STX3Q13277 289 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 SELPLGQ14242 412 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 TBC1D28Q2M2D7 210 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 ZNF718Q3SXZ3 478 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 C10orf128Q5T292 105 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 ARMC4Q5T2S8 1044 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 LRIF1Q5T3J3 769 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 C10orf25Q5T742 122 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 OTPQ5XKR4 325 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 OLFML2AQ68BL7 652 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 TMEM53Q6P2H8 277 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 SLC25A47Q6Q0C1 308 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 RBMS3Q6XE24 437 aaKnown RBP3.79□□□□□ -1.8
CKS1B-207ENST00000477676 PTOV1Q86YD1 416 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 ANKRD13BQ86YJ7 626 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 EGFL6Q8IUX8 553 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 RBM15BQ8NDT2 890 aaKnown RBP3.79□□□□□ -1.8
CKS1B-207ENST00000477676 NOXO1Q8NFA2 376 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms