RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 LIPHQ8WWY8 451 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 DACT3Q96B18 629 aaPredicted RBP5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 SLCO4A1Q96BD0 722 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 PRRC1Q96M27 445 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 ZNF583Q96ND8 569 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 ADAT1Q9BUB4 502 aaKnown RBP5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 NSRP1Q9H0G5 558 aaKnown RBP5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 PPA2Q9H2U2 334 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 TOR3AQ9H497 397 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 FN3KRPQ9HA64 309 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 SMURF1Q9HCE7 757 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 SIRT7Q9NRC8 400 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 RNF7Q9UBF6 113 aa5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 CAB39Q9Y376 341 aaPredicted RBP5.53□□□□□ -1.52
RTFDC1-206ENST00000477485 TRAV38-1A0A0B4J264 116 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 PRSS37A4D1T9 235 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 C5orf63A6NC05 138 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 OOEPA6NGQ2 149 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 GGT3PA6NGU5 568 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 J3KTA2 159 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 J3QW42 95 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 LGALS8O00214 317 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 DVL1O14640 695 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 IMPA2O14732 288 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 ZNF682O95780 498 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 HLA-DQA2P01906 255 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 LCATP04180 440 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 IFNW1P05000 195 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 CD14P08571 375 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 MMP9P14780 707 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 EEF1B2P24534 225 aaKnown RBP5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 GGT2P36268 569 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 LSM6P62312 80 aaKnown RBP5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 PRKCDQ05655 676 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 DBPQ10586 325 aaPredicted RBP5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 MAB21L1Q13394 359 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 GK2Q14410 553 aaPredicted RBP5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 TRAM2Q15035 370 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 BEAN1Q3B7T3 259 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 CLEC12AQ5QGZ9 265 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 NANOGP8Q6NSW7 305 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 ERICH5Q6P6B1 374 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 ZNF841Q6ZN19 808 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 Q6ZPA2 131 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 PGAP1Q75T13 922 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 CCDC80Q76M96 950 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 BTN2A1Q7KYR7 527 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 LDLRAD3Q86YD5 345 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 LINC00346Q8IVM7 164 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 CMTM4Q8IZR5 234 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 LYG1Q8N1E2 194 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 LRRC75AQ8NAA5 344 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 GJC3Q8NFK1 279 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 OR2AJ1Q8NGZ0 328 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 SGCDQ92629 289 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 FAM46AQ96IP4 442 aaKnown RBP5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 PITX2Q99697 317 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 SH3GL1Q99961 368 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 TMEM120AQ9BXJ8 343 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 HDHD2Q9H0R4 259 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 SIRPDQ9H106 197 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 TRIM36Q9NQ86 728 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 C1orf123Q9NWV4 160 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 VPREB3Q9UKI3 123 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 A4GNTQ9UNA3 340 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 AURKCQ9UQB9 309 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 N6AMT1Q9Y5N5 214 aa5.52□□□□□ -1.53
RTFDC1-206ENST00000477485 PRKDCP78527 4128 aaKnown RBP5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 A0A0G2JND7 137 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 A0A1B0GVI7 797 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 MEIOCA2RUB1 952 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 CDC42EP2O14613 210 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 NDUFB2O95178 105 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 FUT4P22083 530 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 SDHAP31040 664 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 GABRA5P31644 462 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 TGFBR2P37173 567 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 PSMB10P40306 273 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 CD200P41217 278 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 GATA4P43694 442 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 DLX1P56177 255 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 GMFBP60983 142 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 KLRD1Q13241 179 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 IKZF1Q13422 519 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 HERPUD1Q15011 391 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 LY6EQ16553 131 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 NSUN5P1Q3KNT7 163 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 ANKDD1AQ495B1 522 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 ZBED5Q49AG3 693 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 SLC35E4Q6ICL7 350 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 DNM1P34Q6PK57 102 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 TBPL2Q6SJ96 375 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 C1orf122Q6ZSJ8 110 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 ZNF826PQ6ZT77 177 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 FKBP9P1Q75LS8 142 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 REC114Q7Z4M0 266 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 OFCC1Q8IZS5 231 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 FGFRL1Q8N441 504 aa5.51□□□□□ -1.53
RTFDC1-206ENST00000477485 CELF2-AS1Q8N7Q2 184 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms