RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 YAP1P46937 504 aaKnown RBP8□□□□□ -1.13
COL4A5-204ENST00000477429 EFNB2P52799 333 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 COL10A1Q03692 680 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 HERPUD1Q15011 391 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 KRTAP27-1Q3LI81 207 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 DHRS7BQ6IAN0 325 aaPredicted RBP8□□□□□ -1.13
COL4A5-204ENST00000477429 CORO6Q6QEF8 472 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 COLCA1Q6ZS62 124 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 BTN2A1Q7KYR7 527 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 FAM122BQ7Z309 247 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 HDDC2Q7Z4H3 204 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 VMO1Q7Z5L0 202 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 DHDDSQ86SQ9 333 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 FAM90A1Q86YD7 464 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 Q8N7P7 452 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 PCYOX1LQ8NBM8 494 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 SCCPDHQ8NBX0 429 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 RASD2Q96D21 266 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 BPIFA2Q96DR5 249 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 AJUBAQ96IF1 538 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 ZNF582Q96NG8 517 aaPredicted RBP8□□□□□ -1.13
COL4A5-204ENST00000477429 PPA2Q9H2U2 334 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 SIRT7Q9NRC8 400 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 GAR1Q9NY12 217 aaKnown RBP8□□□□□ -1.13
COL4A5-204ENST00000477429 GMPR2Q9P2T1 348 aaKnown RBP8□□□□□ -1.13
COL4A5-204ENST00000477429 RHCGQ9UBD6 479 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 VPREB3Q9UKI3 123 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 A4GNTQ9UNA3 340 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 COA3Q9Y2R0 106 aaPredicted RBP8□□□□□ -1.13
COL4A5-204ENST00000477429 MED31Q9Y3C7 131 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 LHFPL6Q9Y693 200 aa8□□□□□ -1.13
COL4A5-204ENST00000477429 ADARB2-AS1A8MUL3 147 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 J3KTA2 159 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 K7EIL1 84 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 DVL1O14640 695 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 FFAR1O14842 300 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 OR5F1O95221 314 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 AMY2BP19961 511 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 TUBG1P23258 451 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 TAS2R41P59536 307 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 HIST1H3AP68431 136 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 SCRN3Q0VDG4 424 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 DOC2BQ14184 412 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 GK2Q14410 553 aaPredicted RBP7.99□□□□□ -1.13
COL4A5-204ENST00000477429 RABL3Q5HYI8 236 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 HIST2H3PS2Q5TEC6 136 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 TBPL2Q6SJ96 375 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 HIST2H3AQ71DI3 136 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 CCDC80Q76M96 950 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.99□□□□□ -1.13
COL4A5-204ENST00000477429 PATL1Q86TB9 770 aaKnown RBP7.99□□□□□ -1.13
COL4A5-204ENST00000477429 NRMQ8IXM6 262 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 GCSAMQ8N6F7 178 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 TNFRSF14Q92956 283 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 PHF21AQ96BD5 680 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 TSSK2Q96PF2 358 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 RSRP1Q9BUV0 290 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 MMP28Q9H239 520 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 PPP1R3EQ9H7J1 279 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 TUBG2Q9NRH3 451 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 TMEM100Q9NV29 134 aa7.99□□□□□ -1.13
COL4A5-204ENST00000477429 STX18Q9P2W9 335 aaKnown RBP7.99□□□□□ -1.13
COL4A5-204ENST00000477429 TEX13CA0A0J9YWL9 993 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 LRRC30A6NM36 301 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 LGALS8O00214 317 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 SLC16A7O60669 478 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 SELLP14151 372 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 CA6P23280 308 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 CD200P41217 278 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 SLC9A3P48764 834 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 FXYD6P3P58550 94 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 STX1BP61266 288 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 AQP6Q13520 282 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 HABP2Q14520 560 aaPredicted RBP7.98□□□□□ -1.13
COL4A5-204ENST00000477429 VMACQ2NL98 169 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 BEND6Q5SZJ8 279 aaPredicted RBP7.98□□□□□ -1.13
COL4A5-204ENST00000477429 METTL11BQ5VVY1 283 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 FOXB2Q5VYV0 432 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 WDR93Q6P2C0 686 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 CRIP3Q6Q6R5 217 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 GDPGP1Q6ZNW5 385 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 CFAP77Q6ZQR2 320 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 PTCHD4Q6ZW05 846 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 WDR86Q86TI4 376 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 DPP10Q8N608 796 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 KLHDC1Q8N7A1 406 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 RORBQ92753 470 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 SLCO4A1Q96BD0 722 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 LYSTQ99698 3801 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 SYT4Q9H2B2 425 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 RERGLQ9H628 205 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 ERVK-18Q9QC07 812 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 FBLN5Q9UBX5 448 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 RPUSD1Q9UJJ7 312 aaKnown RBP7.98□□□□□ -1.13
COL4A5-204ENST00000477429 CORO2BQ9UQ03 480 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 STAB2Q8WWQ8 2551 aa7.98□□□□□ -1.13
COL4A5-204ENST00000477429 ELOVL7A1L3X0 281 aa7.97□□□□□ -1.13
COL4A5-204ENST00000477429 PRSS37A4D1T9 235 aa7.97□□□□□ -1.13
COL4A5-204ENST00000477429 GMNCA6NCL1 334 aa7.97□□□□□ -1.13
COL4A5-204ENST00000477429 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms