RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 EFNB2P52799 333 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 PDCD1Q15116 288 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 FHL5Q5TD97 284 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 CFAP161Q6P656 301 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 GJC3Q8NFK1 279 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 OR2AK2Q8NG84 335 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 STOML3Q8TAV4 291 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 ROBO4Q8WZ75 1007 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 CTHRC1Q96CG8 243 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 SPACA9Q96E40 222 aaPredicted RBP9.89□□□□□ -0.83
COL27A1-204ENST00000477421 VRK1Q99986 396 aaPredicted RBP9.89□□□□□ -0.83
COL27A1-204ENST00000477421 ST6GALNAC2Q9UJ37 374 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 AKAP6Q13023 2319 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 ICMTO60725 284 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 MALLQ13021 153 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 GSG1Q2KHT4 349 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 TMPPEQ6ZT21 453 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 BEND4Q6ZU67 534 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 ARL6IP6Q8N6S5 226 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 GVQW1Q8N7I0 195 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 OR56B1Q8NGI3 324 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 MARCH1Q8TCQ1 289 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 PRELID1Q9Y255 219 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 SCN8AQ9UQD0 1980 aa9.89□□□□□ -0.83
COL27A1-204ENST00000477421 TRIM64BA6NI03 449 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 PLPP3O14495 311 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 EPHA1P21709 976 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 MSX1P28360 303 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 SELENOPP49908 381 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 BPIFB3P59826 476 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 RIN1Q13671 783 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 HNF4GQ14541 408 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 DEFB123Q8N688 67 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 NKAIN3Q8N8D7 197 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 SLC25A21Q9BQT8 299 aaPredicted RBP9.88□□□□□ -0.83
COL27A1-204ENST00000477421 RSPO3Q9BXY4 272 aaPredicted RBP9.88□□□□□ -0.83
COL27A1-204ENST00000477421 OCIAD1Q9NX40 245 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 TNFSF11O14788 317 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 GLSO94925 669 aaPredicted RBP9.88□□□□□ -0.83
COL27A1-204ENST00000477421 OR4E1P0C645 316 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 ANKRD34CP0C6C1 535 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 PET100P0DJ07 73 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 B4GALT1P15291 398 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 NAGAP17050 411 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 GALP22466 123 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 MFGE8Q08431 387 aaPredicted RBP9.88□□□□□ -0.83
COL27A1-204ENST00000477421 STK11Q15831 433 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 PHLDA2Q53GA4 152 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 HAGHLQ6PII5 290 aaPredicted RBP9.88□□□□□ -0.83
COL27A1-204ENST00000477421 OR11H7Q8NGC8 314 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 OR52N4Q8NGI2 321 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 PGLYRP3Q96LB9 341 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 EIF5A2Q9GZV4 153 aaKnown RBP9.88□□□□□ -0.83
COL27A1-204ENST00000477421 M0R135 149 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 MASP2O00187 686 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 SCGNO76038 276 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 ENPP1P22413 925 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 CYB561P49447 251 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 CLVS2Q5SYC1 327 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 TIGD3Q6B0B8 471 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 ANKRD37Q7Z713 158 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 AKR7LQ8NHP1 331 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 FNDC9Q8TBE3 224 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 RNF128Q8TEB7 428 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 ZNF799Q96GE5 643 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 SCARF2Q96GP6 870 aaPredicted RBP9.88□□□□□ -0.83
COL27A1-204ENST00000477421 PCDHB16Q9NRJ7 776 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 WIF1Q9Y5W5 379 aa9.88□□□□□ -0.83
COL27A1-204ENST00000477421 SNRNP200O75643 2136 aaKnown RBP9.87□□□□□ -0.83
COL27A1-204ENST00000477421 RANBP2P49792 3224 aaKnown RBP9.87□□□□□ -0.83
COL27A1-204ENST00000477421 A0A087WV48 116 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 F8W036 122 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 SGCEO43556 437 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 CTAG2O75638 210 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 ZNF44P15621 663 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 PVALBP20472 110 aaPredicted RBP9.87□□□□□ -0.83
COL27A1-204ENST00000477421 OMGP23515 440 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 BLOC1S1P78537 153 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 ACSM1Q08AH1 577 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 PLEKHN1Q494U1 663 aaPredicted RBP9.87□□□□□ -0.83
COL27A1-204ENST00000477421 THEM4Q5T1C6 240 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 CD200R1LQ6Q8B3 271 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 LYPD8Q6UX82 237 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 TMUB2Q71RG4 321 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 MAML2Q8IZL2 1156 aaPredicted RBP9.87□□□□□ -0.83
COL27A1-204ENST00000477421 MESP1Q9BRJ9 268 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 C1QTNF6Q9BXI9 259 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 TAS2R5Q9NYW4 299 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 PTTG3PQ9NZH4 202 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 NOSIPQ9Y314 301 aaKnown RBP9.87□□□□□ -0.83
COL27A1-204ENST00000477421 TCRBV16S1A1N1A0A5B0 115 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 OR6C76A6NM76 312 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 LGALS8O00214 317 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 DIRAS3O95661 229 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 MSR1P21757 451 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 EPHA4P54764 986 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 GNMTQ14749 295 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 PPA1Q15181 289 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 FAM219AQ8IW50 185 aa9.87□□□□□ -0.83
COL27A1-204ENST00000477421 SLC25A45Q8N413 288 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms