RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 ATP1B3P54709 279 aa8.71□□□□□ -1.01
CDH23-211ENST00000475158 TAF9Q16594 264 aa8.71□□□□□ -1.01
CDH23-211ENST00000475158 C2orf76Q3KRA6 126 aa8.71□□□□□ -1.01
CDH23-211ENST00000475158 FCRL6Q6DN72 434 aa8.71□□□□□ -1.01
CDH23-211ENST00000475158 GUSBP11Q6P575 273 aa8.71□□□□□ -1.01
CDH23-211ENST00000475158 C5orf46Q6UWT4 87 aa8.71□□□□□ -1.01
CDH23-211ENST00000475158 CPEB2Q7Z5Q1 589 aaKnown RBP8.71□□□□□ -1.01
CDH23-211ENST00000475158 C9orf62Q8N4C0 152 aa8.71□□□□□ -1.01
CDH23-211ENST00000475158 HSD17B11Q8NBQ5 300 aa8.71□□□□□ -1.01
CDH23-211ENST00000475158 KCNG3Q8TAE7 436 aa8.71□□□□□ -1.01
CDH23-211ENST00000475158 IFI44Q8TCB0 444 aa8.71□□□□□ -1.01
CDH23-211ENST00000475158 ALKBH3Q96Q83 286 aaPredicted RBP8.71□□□□□ -1.01
CDH23-211ENST00000475158 VPS25Q9BRG1 176 aa8.71□□□□□ -1.01
CDH23-211ENST00000475158 UTP23Q9BRU9 249 aaKnown RBP8.71□□□□□ -1.01
CDH23-211ENST00000475158 TOLLIPQ9H0E2 274 aa8.71□□□□□ -1.01
CDH23-211ENST00000475158 FGF20Q9NP95 211 aaPredicted RBP8.71□□□□□ -1.01
CDH23-211ENST00000475158 ENY2Q9NPA8 101 aa8.71□□□□□ -1.01
CDH23-211ENST00000475158 PRSS37A4D1T9 235 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 GREM1O60565 184 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 EIF4E2O60573 245 aaKnown RBP8.71□□□□□ -1.02
CDH23-211ENST00000475158 ABCD3P28288 659 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 CYB561P49447 251 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 CCL11P51671 97 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 MVDP53602 400 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 RNF4P78317 190 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 SLC35D3Q5M8T2 416 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 MAMSTRQ6ZN01 415 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 LRRTM1Q86UE6 522 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 MRPL41Q8IXM3 137 aaKnown RBP8.71□□□□□ -1.02
CDH23-211ENST00000475158 OR5AS1Q8N127 324 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 DEFB123Q8N688 67 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 HPSE2Q8WWQ2 592 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 THOC3Q96J01 351 aaKnown RBP8.71□□□□□ -1.02
CDH23-211ENST00000475158 RSRP1Q9BUV0 290 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 EVA1AQ9H8M9 152 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 ABCA4P78363 2273 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 A0A1W2PPV9 198 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 BTBD17A6NE02 478 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 TRAPPC2LH3BP13 241 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 SCGB1D1O95968 90 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 MT-ATP6P00846 226 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 LAP3P28838 519 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 CD80P33681 288 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 HMGA2P52926 109 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 CDK5Q00535 292 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 Q5BKY6 102 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 OGFOD3Q6PK18 319 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 ADGRE4PQ86SQ3 457 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 TMEM52Q8NDY8 209 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 LIPHQ8WWY8 451 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 FBXO17Q96EF6 278 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 VN1R1Q9GZP7 353 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 FAM234AQ9H0X4 552 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 CCDC86Q9H6F5 360 aaKnown RBP8.71□□□□□ -1.02
CDH23-211ENST00000475158 CHST11Q9NPF2 352 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 WIF1Q9Y5W5 379 aa8.71□□□□□ -1.02
CDH23-211ENST00000475158 PLXNB2O15031 1838 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 GABARAPH6UMI1 98 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 LPLP06858 475 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 CXCL3P19876 107 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 CCR5P51681 352 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 FOXK1P85037 733 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 TGFBR3Q03167 851 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 ARL6IP1Q15041 203 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 PDCD1Q15116 288 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 TOMM34Q15785 309 aaPredicted RBP8.7□□□□□ -1.02
CDH23-211ENST00000475158 ETFDHQ16134 617 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 TMEM217Q8N7C4 229 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 OR4S1Q8NGB4 309 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 OR56B1Q8NGI3 324 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 TERB2Q8NHR7 220 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 PSMF1Q92530 271 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 POM121Q96HA1 1249 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 ARHGDIGQ99819 225 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 ATF6BQ99941 703 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 METTL9Q9H1A3 318 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 WDR87Q6ZQQ6 2873 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 A0A087WUJ7 227 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 A0A0B4J2E0 115 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 A0A0D9SG52 128 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 A0A0U1RQK1 487 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 LOC102725191A0A1B0GVB3 256 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 A0A1B0GX12 115 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 PIAS2O75928 621 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 NKX2-2O95096 273 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 MPZL1O95297 269 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 ZFP36L2P47974 494 aaKnown RBP8.7□□□□□ -1.02
CDH23-211ENST00000475158 CNN3Q15417 329 aaKnown RBP8.7□□□□□ -1.02
CDH23-211ENST00000475158 PRICKLE4Q2TBC4 344 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 ACTBL2Q562R1 376 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 TMEM71Q6P5X7 295 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 BPIFCQ8NFQ6 507 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 OR1L3Q8NH93 324 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 ABHD5Q8WTS1 349 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 TAAR8Q969N4 342 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 CCDC74BQ96LY2 380 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.7□□□□□ -1.02
CDH23-211ENST00000475158 LANCL2Q9NS86 450 aa8.7□□□□□ -1.02
CDH23-211ENST00000475158 NXT1Q9UKK6 140 aaKnown RBP8.7□□□□□ -1.02
CDH23-211ENST00000475158 SCN10AQ9Y5Y9 1956 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms