RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 H0YL77 283 aa15.14■□□□□ 0.01
UPF3A-203ENST00000474056 GSC2O15499 205 aa15.14■□□□□ 0.01
UPF3A-203ENST00000474056 PHF1O43189 567 aaPredicted RBP15.14■□□□□ 0.01
UPF3A-203ENST00000474056 MLNRO43193 412 aa15.14■□□□□ 0.01
UPF3A-203ENST00000474056 IGHV2-70P01814 119 aa15.14■□□□□ 0.01
UPF3A-203ENST00000474056 SPARCP09486 303 aa15.14■□□□□ 0.01
UPF3A-203ENST00000474056 SLC6A9P48067 706 aa15.14■□□□□ 0.01
UPF3A-203ENST00000474056 TPTEP56180 551 aa15.14■□□□□ 0.01
UPF3A-203ENST00000474056 BNIP1Q12981 228 aa15.14■□□□□ 0.01
UPF3A-203ENST00000474056 GK2Q14410 553 aaPredicted RBP15.14■□□□□ 0.01
UPF3A-203ENST00000474056 PCK2Q16822 640 aa15.14■□□□□ 0.01
UPF3A-203ENST00000474056 LINC01590Q5TEZ4 76 aa15.14■□□□□ 0.01
UPF3A-203ENST00000474056 ACSM5Q6NUN0 579 aa15.14■□□□□ 0.01
UPF3A-203ENST00000474056 SLCO4A1Q96BD0 722 aa15.14■□□□□ 0.01
UPF3A-203ENST00000474056 ZNF582Q96NG8 517 aaPredicted RBP15.14■□□□□ 0.01
UPF3A-203ENST00000474056 SIGLEC11Q96RL6 698 aa15.14■□□□□ 0.01
UPF3A-203ENST00000474056 RNF212BA8MTL3 300 aa15.13■□□□□ 0.01
UPF3A-203ENST00000474056 ZNF593O00488 134 aaPredicted RBP15.13■□□□□ 0.01
UPF3A-203ENST00000474056 SURF4O15260 269 aa15.13■□□□□ 0.01
UPF3A-203ENST00000474056 PLPP2O43688 288 aa15.13■□□□□ 0.01
UPF3A-203ENST00000474056 E2F6O75461 281 aa15.13■□□□□ 0.01
UPF3A-203ENST00000474056 HOXB6P17509 224 aaKnown RBP15.13■□□□□ 0.01
UPF3A-203ENST00000474056 PCMT1P22061 227 aa15.13■□□□□ 0.01
UPF3A-203ENST00000474056 PRKACGP22612 351 aa15.13■□□□□ 0.01
UPF3A-203ENST00000474056 POU1F1P28069 291 aa15.13■□□□□ 0.01
UPF3A-203ENST00000474056 OTX1P32242 354 aaPredicted RBP15.13■□□□□ 0.01
UPF3A-203ENST00000474056 SRSF2Q01130 221 aaKnown RBP15.13■□□□□ 0.01
UPF3A-203ENST00000474056 SNAI3Q3KNW1 292 aa15.13■□□□□ 0.01
UPF3A-203ENST00000474056 SLC27A4Q6P1M0 643 aa15.13■□□□□ 0.01
UPF3A-203ENST00000474056 PEG10Q86TG7 708 aaKnown RBP15.13■□□□□ 0.01
UPF3A-203ENST00000474056 PAPD5Q8NDF8 572 aaKnown RBP15.13■□□□□ 0.01
UPF3A-203ENST00000474056 OR13G1Q8NGZ3 307 aa15.13■□□□□ 0.01
UPF3A-203ENST00000474056 SPTSSAQ969W0 71 aa15.13■□□□□ 0.01
UPF3A-203ENST00000474056 SLC30A2Q9BRI3 323 aa15.13■□□□□ 0.01
UPF3A-203ENST00000474056 COPS4Q9BT78 406 aa15.13■□□□□ 0.01
UPF3A-203ENST00000474056 G6PC2Q9NQR9 355 aa15.13■□□□□ 0.01
UPF3A-203ENST00000474056 UBAP1Q9NZ09 502 aa15.13■□□□□ 0.01
UPF3A-203ENST00000474056 PPP1R3CQ9UQK1 317 aa15.13■□□□□ 0.01
UPF3A-203ENST00000474056 MXRA5Q9NR99 2828 aa15.13■□□□□ 0.01
UPF3A-203ENST00000474056 C5orf63A6NC05 138 aa15.12■□□□□ 0.01
UPF3A-203ENST00000474056 ANPEPP15144 967 aa15.12■□□□□ 0.01
UPF3A-203ENST00000474056 SELEP16581 610 aa15.12■□□□□ 0.01
UPF3A-203ENST00000474056 THBS2P35442 1172 aa15.12■□□□□ 0.01
UPF3A-203ENST00000474056 SRP14P37108 136 aaKnown RBP15.12■□□□□ 0.01
UPF3A-203ENST00000474056 MMP16P51512 607 aa15.12■□□□□ 0.01
UPF3A-203ENST00000474056 MALLQ13021 153 aa15.12■□□□□ 0.01
UPF3A-203ENST00000474056 TEX30Q5JUR7 227 aa15.12■□□□□ 0.01
UPF3A-203ENST00000474056 OR2AE1Q8NHA4 323 aa15.12■□□□□ 0.01
UPF3A-203ENST00000474056 ZNF420Q8TAQ5 688 aaPredicted RBP15.12■□□□□ 0.01
UPF3A-203ENST00000474056 ST7LQ8TDW4 575 aa15.12■□□□□ 0.01
UPF3A-203ENST00000474056 OTULINQ96BN8 352 aa15.12■□□□□ 0.01
UPF3A-203ENST00000474056 SLAMF6Q96DU3 332 aa15.12■□□□□ 0.01
UPF3A-203ENST00000474056 MEGF10Q96KG7 1140 aa15.12■□□□□ 0.01
UPF3A-203ENST00000474056 YY1AP1Q9H869 796 aa15.12■□□□□ 0.01
UPF3A-203ENST00000474056 GCM1Q9NP62 436 aa15.12■□□□□ 0.01
UPF3A-203ENST00000474056 CENPMQ9NSP4 180 aa15.12■□□□□ 0.01
UPF3A-203ENST00000474056 DNAJB9Q9UBS3 223 aa15.12■□□□□ 0.01
UPF3A-203ENST00000474056 TRAV20A0A0B4J274 112 aa15.11■□□□□ 0.01
UPF3A-203ENST00000474056 IGHV3-64DA0A0J9YX35 117 aa15.11■□□□□ 0.01
UPF3A-203ENST00000474056 ZNF878C9JN71 531 aa15.11■□□□□ 0.01
UPF3A-203ENST00000474056 F5H5P2 479 aa15.11■□□□□ 0.01
UPF3A-203ENST00000474056 HLA-DPB1P04440 258 aa15.11■□□□□ 0.01
UPF3A-203ENST00000474056 SBK2P0C263 348 aa15.11■□□□□ 0.01
UPF3A-203ENST00000474056 SLC2A1P11166 492 aa15.11■□□□□ 0.01
UPF3A-203ENST00000474056 OSMP13725 252 aa15.11■□□□□ 0.01
UPF3A-203ENST00000474056 PRKXP51817 358 aa15.11■□□□□ 0.01
UPF3A-203ENST00000474056 GINS1Q14691 196 aa15.11■□□□□ 0.01
UPF3A-203ENST00000474056 PGAP1Q75T13 922 aa15.11■□□□□ 0.01
UPF3A-203ENST00000474056 SPATC1Q76KD6 591 aa15.11■□□□□ 0.01
UPF3A-203ENST00000474056 DPY19L4Q7Z388 723 aa15.11■□□□□ 0.01
UPF3A-203ENST00000474056 ERI1Q8IV48 349 aaKnown RBP15.11■□□□□ 0.01
UPF3A-203ENST00000474056 PHC2Q8IXK0 858 aa15.11■□□□□ 0.01
UPF3A-203ENST00000474056 OR6N2Q8NGY6 317 aa15.11■□□□□ 0.01
UPF3A-203ENST00000474056 ZNF556Q9HAH1 456 aa15.11■□□□□ 0.01
UPF3A-203ENST00000474056 NTN4Q9HB63 628 aa15.11■□□□□ 0.01
UPF3A-203ENST00000474056 TMEM100Q9NV29 134 aa15.11■□□□□ 0.01
UPF3A-203ENST00000474056 A0A1B0GWJ7 208 aa15.1■□□□□ 0.01
UPF3A-203ENST00000474056 TMEM178BH3BS89 294 aa15.1■□□□□ 0.01
UPF3A-203ENST00000474056 TIPRLO75663 272 aa15.1■□□□□ 0.01
UPF3A-203ENST00000474056 GLCEO94923 617 aa15.1■□□□□ 0.01
UPF3A-203ENST00000474056 PNPP00491 289 aa15.1■□□□□ 0.01
UPF3A-203ENST00000474056 ANXA8P13928 327 aa15.1■□□□□ 0.01
UPF3A-203ENST00000474056 SRP9P49458 86 aaKnown RBP15.1■□□□□ 0.01
UPF3A-203ENST00000474056 BLVRAP53004 296 aa15.1■□□□□ 0.01
UPF3A-203ENST00000474056 BTG1P62324 171 aa15.1■□□□□ 0.01
UPF3A-203ENST00000474056 CDK5Q00535 292 aa15.1■□□□□ 0.01
UPF3A-203ENST00000474056 ZNF92Q03936 586 aa15.1■□□□□ 0.01
UPF3A-203ENST00000474056 EIF2B1Q14232 305 aaKnown RBP15.1■□□□□ 0.01
UPF3A-203ENST00000474056 TAF13Q15543 124 aa15.1■□□□□ 0.01
UPF3A-203ENST00000474056 GLYATL3Q5SZD4 288 aa15.1■□□□□ 0.01
UPF3A-203ENST00000474056 FAHD2BQ6P2I3 314 aaPredicted RBP15.1■□□□□ 0.01
UPF3A-203ENST00000474056 DRAM2Q6UX65 266 aa15.1■□□□□ 0.01
UPF3A-203ENST00000474056 MRPL21Q7Z2W9 205 aaKnown RBP15.1■□□□□ 0.01
UPF3A-203ENST00000474056 FAHD2AQ96GK7 314 aa15.1■□□□□ 0.01
UPF3A-203ENST00000474056 INTS14Q96SY0 518 aa15.1■□□□□ 0.01
UPF3A-203ENST00000474056 KCNJ15Q99712 375 aa15.1■□□□□ 0.01
UPF3A-203ENST00000474056 OR51V1Q9H2C8 321 aa15.1■□□□□ 0.01
UPF3A-203ENST00000474056 MARCH7Q9H992 704 aa15.1■□□□□ 0.01
UPF3A-203ENST00000474056 PRR23D1E9PI22 279 aaPredicted RBP15.09■□□□□ 0.01
UPF3A-203ENST00000474056 CYB5R3P00387 301 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms