RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 NDRG3Q9UGV2 375 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 SPEF1Q9Y4P9 236 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 CEPT1Q9Y6K0 416 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 TPRP12270 2363 aaKnown RBP8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 TLN1Q9Y490 2541 aaKnown RBP8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 FREM1Q5H8C1 2179 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 SHANK1Q9Y566 2161 aa8.96□□□□□ -0.98
PRPF38A-202ENST00000474048 TRDV1A0A1B0GX56 115 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 H3BMQ9 156 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 M0R1B8 84 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 P2RY10O00398 339 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 PDCD5O14737 125 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 CASKO14936 926 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 ZFPL1O95159 310 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 CBR1P16152 277 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 GNALP38405 381 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 SOX2P48431 317 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 VBP1P61758 197 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 PPP3R1P63098 170 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 ACSM3Q53FZ2 586 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 HSD17B12Q53GQ0 312 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 STAC2Q6ZMT1 411 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 DOK3Q7L591 496 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 MRPL21Q7Z2W9 205 aaKnown RBP8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 ELMOD2Q8IZ81 293 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 FTMTQ8N4E7 242 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 RELL2Q8NC24 303 aaPredicted RBP8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 IL17RDQ8NFM7 739 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 ABHD4Q8TB40 342 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 PHYHIPQ92561 330 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 APOBEC3DQ96AK3 386 aaPredicted RBP8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 CCDC120Q96HB5 630 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 OR14A2Q96R54 314 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 MED18Q9BUE0 208 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 OR10A4Q9H209 315 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 RGCCQ9H4X1 137 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 OPA3Q9H6K4 179 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 FAM206AQ9NX38 181 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 SLC22A13Q9Y226 551 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 CACNA1CQ13936 2221 aa8.95□□□□□ -0.98
PRPF38A-202ENST00000474048 A0A0U1RQV5 110 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 OR4C45A6NMZ5 311 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 H3BSH0 61 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 J3QW42 95 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 MAGEB3O15480 346 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 AGFG2O95081 481 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 CRYAAP02489 173 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 DBHP09172 617 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 ACSM4P0C7M7 580 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 CRYGSP22914 178 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 CALRP27797 417 aaKnown RBP8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 UGT2B10P36537 528 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 RANBP1P43487 201 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 KIR3DL2P43630 455 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 ZNF83P51522 516 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 NANOS3P60323 173 aaKnown RBP8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 FABP5Q01469 135 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 FAM27E3Q08E93 113 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 DGUOKQ16854 277 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 ZMAT1Q5H9K5 638 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 LIX1LQ8IVB5 337 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 PRSS35Q8N3Z0 413 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 OR8B12Q8NGG6 310 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 FGFBP3Q8TAT2 258 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 OR51E1Q8TCB6 317 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 SLC7A6Q92536 515 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 RPL3LQ92901 407 aaKnown RBP8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 RNASE6Q93091 150 aaKnown RBP8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 TMEM106AQ96A25 262 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 REEP6Q96HR9 211 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 BOD1Q96IK1 185 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 FAM71F1Q96KD3 344 aaPredicted RBP8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 PGLYRP3Q96LB9 341 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 C1QTNF6Q9BXI9 259 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 NAA50Q9GZZ1 169 aaKnown RBP8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 DCSTAMPQ9H295 470 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 OCEL1Q9H607 264 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 TXNL4BQ9NX01 149 aaKnown RBP8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 ZNF224Q9NZL3 707 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 SIRT4Q9Y6E7 314 aaPredicted RBP8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 CACNA1BQ00975 2339 aa8.94□□□□□ -0.98
PRPF38A-202ENST00000474048 ANXA2P2A6NMY6 339 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 PNPP00491 289 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 TTRP02766 147 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 RAF1P04049 648 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 ISG15P05161 165 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 CCL2P13500 99 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 FGF9P31371 208 aaPredicted RBP8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 OTX1P32242 354 aaPredicted RBP8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 PEX19P40855 299 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 CRYBB2P43320 205 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 RAD52P43351 418 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 MAP2K3P46734 347 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 NCS1P62166 190 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 IGFBP7Q16270 282 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 XKRXQ6PP77 449 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 TMEM108Q6UXF1 575 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 SLC16A12Q6ZSM3 486 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 WFDC8Q8IUA0 241 aa8.93□□□□□ -0.98
PRPF38A-202ENST00000474048 C1orf174Q8IYL3 243 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms