RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 SLC2A1P11166 492 aa10.63□□□□□ -0.71
DDX56-209ENST00000473924 NAT2P11245 290 aa10.63□□□□□ -0.71
DDX56-209ENST00000473924 MTNR1AP48039 350 aa10.63□□□□□ -0.71
DDX56-209ENST00000473924 EFNA4P52798 201 aa10.63□□□□□ -0.71
DDX56-209ENST00000473924 CXCR4P61073 352 aa10.63□□□□□ -0.71
DDX56-209ENST00000473924 PSG7Q13046 419 aa10.63□□□□□ -0.71
DDX56-209ENST00000473924 HLXQ14774 488 aaPredicted RBP10.63□□□□□ -0.71
DDX56-209ENST00000473924 COLCA1Q6ZS62 124 aa10.63□□□□□ -0.71
DDX56-209ENST00000473924 ZCCHC24Q8N2G6 241 aaKnown RBP10.63□□□□□ -0.71
DDX56-209ENST00000473924 SETD9Q8NE22 299 aa10.63□□□□□ -0.71
DDX56-209ENST00000473924 RHOXF1Q8NHV9 184 aa10.63□□□□□ -0.71
DDX56-209ENST00000473924 RNFT2Q96EX2 444 aa10.63□□□□□ -0.71
DDX56-209ENST00000473924 SORCS2Q96PQ0 1159 aa10.63□□□□□ -0.71
DDX56-209ENST00000473924 TBX5Q99593 518 aa10.63□□□□□ -0.71
DDX56-209ENST00000473924 ADI1Q9BV57 179 aa10.63□□□□□ -0.71
DDX56-209ENST00000473924 VCX3BQ9H321 246 aa10.63□□□□□ -0.71
DDX56-209ENST00000473924 TPK1Q9H3S4 243 aa10.63□□□□□ -0.71
DDX56-209ENST00000473924 NIPAL2Q9H841 368 aa10.63□□□□□ -0.71
DDX56-209ENST00000473924 BRD7Q9NPI1 651 aa10.63□□□□□ -0.71
DDX56-209ENST00000473924 COPS3Q9UNS2 423 aa10.63□□□□□ -0.71
DDX56-209ENST00000473924 USF3Q68DE3 2245 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 CLIC3O95833 236 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 F12P00748 615 aaPredicted RBP10.62□□□□□ -0.71
DDX56-209ENST00000473924 OR2T7P0C7T2 308 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 RAC2P15153 192 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 GABRB1P18505 474 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 LIPAP38571 399 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 CAPGP40121 348 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 ZNF81P51508 661 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 ZNF121P58317 390 aaPredicted RBP10.62□□□□□ -0.71
DDX56-209ENST00000473924 SNAI3Q3KNW1 292 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 ZMAT1Q5H9K5 638 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 ZNF691Q5VV52 312 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 ZNF322Q6U7Q0 402 aaPredicted RBP10.62□□□□□ -0.71
DDX56-209ENST00000473924 PRSS57Q6UWY2 283 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 FBXW12Q6X9E4 464 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 USP51Q70EK9 711 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 FAM57BQ71RH2 274 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 PGAP1Q75T13 922 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 MRPL21Q7Z2W9 205 aaKnown RBP10.62□□□□□ -0.71
DDX56-209ENST00000473924 OR10H4Q8NGA5 316 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 OR2T27Q8NH04 317 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 NRG4Q8WWG1 115 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 NEU4Q8WWR8 484 aaPredicted RBP10.62□□□□□ -0.71
DDX56-209ENST00000473924 HAVCR1Q96D42 359 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 PGAM5Q96HS1 289 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 OR8B4Q96RC9 309 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 CYSLTR2Q9NS75 346 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 CGGBP1Q9UFW8 167 aaPredicted RBP10.62□□□□□ -0.71
DDX56-209ENST00000473924 PURGQ9UJV8 347 aaKnown RBP10.62□□□□□ -0.71
DDX56-209ENST00000473924 LRP12Q9Y561 859 aa10.62□□□□□ -0.71
DDX56-209ENST00000473924 ARFGEF3Q5TH69 2177 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 CREBBPQ92793 2442 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 C17orf100A8MU93 164 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 H0YAE9 185 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 TPD52L2O43399 206 aaKnown RBP10.61□□□□□ -0.71
DDX56-209ENST00000473924 XRCC2O43543 280 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 ZNF254O75437 659 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 ATP6V1G2O95670 118 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 SELEP16581 610 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 KITLGP21583 273 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 RIDAP52758 137 aaKnown RBP10.61□□□□□ -0.71
DDX56-209ENST00000473924 ADARB1P78563 741 aaKnown RBP10.61□□□□□ -0.71
DDX56-209ENST00000473924 ROM1Q03395 351 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 ZNF91Q05481 1191 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 IL18R1Q13478 541 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 RIPK1Q13546 671 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 GK2Q14410 553 aaPredicted RBP10.61□□□□□ -0.71
DDX56-209ENST00000473924 TESK1Q15569 626 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 TIGD6Q17RP2 521 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 CLEC12BQ2HXU8 276 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 OR2T2Q6IF00 324 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 DEGS2Q6QHC5 323 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 ZNF679Q8IYX0 411 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 C8orf59Q8N0T1 100 aaPredicted RBP10.61□□□□□ -0.71
DDX56-209ENST00000473924 OR5AS1Q8N127 324 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 RFLNBQ8N5W9 214 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 WFDC11Q8NEX6 87 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 OR52H1Q8NGJ2 320 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 Q96MF0 132 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 AMBNQ9NP70 447 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 RRP15Q9Y3B9 282 aaKnown RBP10.61□□□□□ -0.71
DDX56-209ENST00000473924 PCDHGB1Q9Y5G3 927 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 ARID1AO14497 2285 aa10.61□□□□□ -0.71
DDX56-209ENST00000473924 MYO9AB2RTY4 2548 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 A0A1W2PQL4 384 aaPredicted RBP10.6□□□□□ -0.71
DDX56-209ENST00000473924 DAPL1A0PJW8 107 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 SPRY3O43610 288 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 RRP9O43818 475 aaKnown RBP10.6□□□□□ -0.71
DDX56-209ENST00000473924 LY6HO94772 140 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 KRT8P05787 483 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 DBTP11182 482 aaKnown RBP10.6□□□□□ -0.71
DDX56-209ENST00000473924 MMP15P51511 669 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 PSMA6P60900 246 aaKnown RBP10.6□□□□□ -0.71
DDX56-209ENST00000473924 ACTC1P68032 377 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 ACTA1P68133 377 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 ZNF92Q03936 586 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 EGR3Q06889 387 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 CARTPTQ16568 116 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 GFOD2Q3B7J2 385 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms