RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 ALDH3B1P43353 468 aa17.79■□□□□ 0.44
TOP3A-204ENST00000472959 CX3CR1P49238 355 aa17.79■□□□□ 0.44
TOP3A-204ENST00000472959 EFNA4P52798 201 aa17.79■□□□□ 0.44
TOP3A-204ENST00000472959 PSG7Q13046 419 aa17.79■□□□□ 0.44
TOP3A-204ENST00000472959 ZNF691Q5VV52 312 aa17.79■□□□□ 0.44
TOP3A-204ENST00000472959 KRT77Q7Z794 578 aa17.79■□□□□ 0.44
TOP3A-204ENST00000472959 SETD9Q8NE22 299 aa17.79■□□□□ 0.44
TOP3A-204ENST00000472959 OR2T27Q8NH04 317 aa17.79■□□□□ 0.44
TOP3A-204ENST00000472959 NRG4Q8WWG1 115 aa17.79■□□□□ 0.44
TOP3A-204ENST00000472959 CMBLQ96DG6 245 aa17.79■□□□□ 0.44
TOP3A-204ENST00000472959 ADI1Q9BV57 179 aa17.79■□□□□ 0.44
TOP3A-204ENST00000472959 MROQ9BYG7 248 aa17.79■□□□□ 0.44
TOP3A-204ENST00000472959 POFUT1Q9H488 388 aa17.79■□□□□ 0.44
TOP3A-204ENST00000472959 CYSLTR2Q9NS75 346 aa17.79■□□□□ 0.44
TOP3A-204ENST00000472959 MYO9AB2RTY4 2548 aa17.79■□□□□ 0.44
TOP3A-204ENST00000472959 ARID1AO14497 2285 aa17.78■□□□□ 0.44
TOP3A-204ENST00000472959 F12P00748 615 aaPredicted RBP17.78■□□□□ 0.44
TOP3A-204ENST00000472959 KITLGP21583 273 aa17.78■□□□□ 0.44
TOP3A-204ENST00000472959 CAPGP40121 348 aa17.78■□□□□ 0.44
TOP3A-204ENST00000472959 MAD2L1BPQ15013 274 aaPredicted RBP17.78■□□□□ 0.44
TOP3A-204ENST00000472959 Q5PR19 223 aa17.78■□□□□ 0.44
TOP3A-204ENST00000472959 ZNF322Q6U7Q0 402 aaPredicted RBP17.78■□□□□ 0.44
TOP3A-204ENST00000472959 LRRN1Q6UXK5 716 aa17.78■□□□□ 0.44
TOP3A-204ENST00000472959 SPNS3Q6ZMD2 512 aa17.78■□□□□ 0.44
TOP3A-204ENST00000472959 ZNF679Q8IYX0 411 aa17.78■□□□□ 0.44
TOP3A-204ENST00000472959 NEU4Q8WWR8 484 aaPredicted RBP17.78■□□□□ 0.44
TOP3A-204ENST00000472959 RNFT2Q96EX2 444 aa17.78■□□□□ 0.44
TOP3A-204ENST00000472959 PTTG3PQ9NZH4 202 aa17.78■□□□□ 0.44
TOP3A-204ENST00000472959 COPS3Q9UNS2 423 aa17.78■□□□□ 0.44
TOP3A-204ENST00000472959 HSPE1-MOB4S4R3N1 261 aa17.78■□□□□ 0.44
TOP3A-204ENST00000472959 PLSCR5A0PG75 271 aa17.77■□□□□ 0.44
TOP3A-204ENST00000472959 NDUFS7O75251 213 aa17.77■□□□□ 0.44
TOP3A-204ENST00000472959 ATP6V1G2O95670 118 aa17.77■□□□□ 0.44
TOP3A-204ENST00000472959 DCTDP32321 178 aa17.77■□□□□ 0.44
TOP3A-204ENST00000472959 CXCR4P61073 352 aa17.77■□□□□ 0.44
TOP3A-204ENST00000472959 IL5RAQ01344 420 aa17.77■□□□□ 0.44
TOP3A-204ENST00000472959 EGR3Q06889 387 aa17.77■□□□□ 0.44
TOP3A-204ENST00000472959 ZMAT1Q5H9K5 638 aa17.77■□□□□ 0.44
TOP3A-204ENST00000472959 OR52H1Q8NGJ2 320 aa17.77■□□□□ 0.44
TOP3A-204ENST00000472959 SORCS2Q96PQ0 1159 aa17.77■□□□□ 0.44
TOP3A-204ENST00000472959 OR8B4Q96RC9 309 aa17.77■□□□□ 0.44
TOP3A-204ENST00000472959 AASSQ9UDR5 926 aa17.77■□□□□ 0.44
TOP3A-204ENST00000472959 PURGQ9UJV8 347 aaKnown RBP17.77■□□□□ 0.44
TOP3A-204ENST00000472959 LRP12Q9Y561 859 aa17.77■□□□□ 0.44
TOP3A-204ENST00000472959 PCDHGB1Q9Y5G3 927 aa17.77■□□□□ 0.44
TOP3A-204ENST00000472959 RRP9O43818 475 aaKnown RBP17.76■□□□□ 0.43
TOP3A-204ENST00000472959 TIMM8AO60220 97 aaPredicted RBP17.76■□□□□ 0.43
TOP3A-204ENST00000472959 ANXA2P07355 339 aaKnown RBP17.76■□□□□ 0.43
TOP3A-204ENST00000472959 NAT2P11245 290 aa17.76■□□□□ 0.43
TOP3A-204ENST00000472959 SELEP16581 610 aa17.76■□□□□ 0.43
TOP3A-204ENST00000472959 MMP15P51511 669 aa17.76■□□□□ 0.43
TOP3A-204ENST00000472959 ZNF121P58317 390 aaPredicted RBP17.76■□□□□ 0.43
TOP3A-204ENST00000472959 GK2Q14410 553 aaPredicted RBP17.76■□□□□ 0.43
TOP3A-204ENST00000472959 HLXQ14774 488 aaPredicted RBP17.76■□□□□ 0.43
TOP3A-204ENST00000472959 PCGF3Q3KNV8 242 aa17.76■□□□□ 0.43
TOP3A-204ENST00000472959 SNAI3Q3KNW1 292 aa17.76■□□□□ 0.43
TOP3A-204ENST00000472959 PRSS45Q7RTY3 260 aa17.76■□□□□ 0.43
TOP3A-204ENST00000472959 KRTAP1-3Q8IUG1 177 aa17.76■□□□□ 0.43
TOP3A-204ENST00000472959 OR10H4Q8NGA5 316 aa17.76■□□□□ 0.43
TOP3A-204ENST00000472959 IKZF2Q9UKS7 526 aa17.76■□□□□ 0.43
TOP3A-204ENST00000472959 RPL36Q9Y3U8 105 aaKnown RBP17.76■□□□□ 0.43
TOP3A-204ENST00000472959 PRRC2AP48634 2157 aaKnown RBP17.75■□□□□ 0.43
TOP3A-204ENST00000472959 ACOD1A6NK06 481 aa17.75■□□□□ 0.43
TOP3A-204ENST00000472959 C17orf100A8MU93 164 aa17.75■□□□□ 0.43
TOP3A-204ENST00000472959 XRCC2O43543 280 aa17.75■□□□□ 0.43
TOP3A-204ENST00000472959 CLIC3O95833 236 aa17.75■□□□□ 0.43
TOP3A-204ENST00000472959 SLC2A1P11166 492 aa17.75■□□□□ 0.43
TOP3A-204ENST00000472959 RIDAP52758 137 aaKnown RBP17.75■□□□□ 0.43
TOP3A-204ENST00000472959 PSMA6P60900 246 aaKnown RBP17.75■□□□□ 0.43
TOP3A-204ENST00000472959 ISL1P61371 349 aa17.75■□□□□ 0.43
TOP3A-204ENST00000472959 ACTC1P68032 377 aa17.75■□□□□ 0.43
TOP3A-204ENST00000472959 ACTA1P68133 377 aa17.75■□□□□ 0.43
TOP3A-204ENST00000472959 ZNF91Q05481 1191 aa17.75■□□□□ 0.43
TOP3A-204ENST00000472959 ALKBH6Q3KRA9 238 aa17.75■□□□□ 0.43
TOP3A-204ENST00000472959 TMEM255AQ5JRV8 349 aa17.75■□□□□ 0.43
TOP3A-204ENST00000472959 PGAP1Q75T13 922 aa17.75■□□□□ 0.43
TOP3A-204ENST00000472959 MRPL21Q7Z2W9 205 aaKnown RBP17.75■□□□□ 0.43
TOP3A-204ENST00000472959 ZCCHC24Q8N2G6 241 aaKnown RBP17.75■□□□□ 0.43
TOP3A-204ENST00000472959 APH1BQ8WW43 257 aa17.75■□□□□ 0.43
TOP3A-204ENST00000472959 TFAP2CQ92754 450 aa17.75■□□□□ 0.43
TOP3A-204ENST00000472959 OR10A2Q9H208 303 aa17.75■□□□□ 0.43
TOP3A-204ENST00000472959 OPA3Q9H6K4 179 aa17.75■□□□□ 0.43
TOP3A-204ENST00000472959 NKIRAS2Q9NYR9 191 aa17.75■□□□□ 0.43
TOP3A-204ENST00000472959 EXOGQ9Y2C4 368 aaKnown RBP17.75■□□□□ 0.43
TOP3A-204ENST00000472959 RRP15Q9Y3B9 282 aaKnown RBP17.75■□□□□ 0.43
TOP3A-204ENST00000472959 N6AMT1Q9Y5N5 214 aa17.75■□□□□ 0.43
TOP3A-204ENST00000472959 ARFGEF3Q5TH69 2177 aa17.74■□□□□ 0.43
TOP3A-204ENST00000472959 A0A1W2PQL4 384 aaPredicted RBP17.74■□□□□ 0.43
TOP3A-204ENST00000472959 PRR32B1ATL7 298 aa17.74■□□□□ 0.43
TOP3A-204ENST00000472959 J3QRE1 110 aa17.74■□□□□ 0.43
TOP3A-204ENST00000472959 SSX4O60224 188 aa17.74■□□□□ 0.43
TOP3A-204ENST00000472959 WBP4O75554 376 aaKnown RBP17.74■□□□□ 0.43
TOP3A-204ENST00000472959 APOL3O95236 402 aa17.74■□□□□ 0.43
TOP3A-204ENST00000472959 DBTP11182 482 aaKnown RBP17.74■□□□□ 0.43
TOP3A-204ENST00000472959 ZNF81P51508 661 aa17.74■□□□□ 0.43
TOP3A-204ENST00000472959 DSCR9P59020 149 aa17.74■□□□□ 0.43
TOP3A-204ENST00000472959 GLYATL3Q5SZD4 288 aa17.74■□□□□ 0.43
TOP3A-204ENST00000472959 FAM57BQ71RH2 274 aa17.74■□□□□ 0.43
TOP3A-204ENST00000472959 C8orf59Q8N0T1 100 aaPredicted RBP17.74■□□□□ 0.43
TOP3A-204ENST00000472959 SPSB4Q96A44 273 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms