RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 NDUFB2O95178 105 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 CDK1P06493 297 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 IL2RGP31785 369 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 OPRL1P41146 370 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 CRYBB2P43320 205 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 GPR4P46093 362 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 LIMS1P48059 325 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 BCAP31P51572 246 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 DVL1P1P54792 670 aaPredicted RBP11.52□□□□□ -0.57
HMGN1-211ENST00000471260 ERVS71-1P61550 626 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 SPIBQ01892 262 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 CR1LQ2VPA4 569 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 ZNF367Q7RTV3 350 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 FAM122BQ7Z309 247 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 ADCK1Q86TW2 530 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 ZNF101Q8IZC7 436 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 CLDN22Q8N7P3 220 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 AKR7LQ8NHP1 331 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 APH1BQ8WW43 257 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 SGCDQ92629 289 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 MARS2Q96GW9 593 aaKnown RBP11.52□□□□□ -0.57
HMGN1-211ENST00000471260 GPX7Q96SL4 187 aaPredicted RBP11.52□□□□□ -0.57
HMGN1-211ENST00000471260 COPS4Q9BT78 406 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 WNT5BQ9H1J7 359 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 OR51B6Q9H340 312 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 NRIP3Q9NQ35 241 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 POLE4Q9NR33 117 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 CYSLTR2Q9NS75 346 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 DECR2Q9NUI1 292 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 RHBDL2Q9NX52 303 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 CHCHD3Q9NX63 227 aaKnown RBP11.52□□□□□ -0.57
HMGN1-211ENST00000471260 SIGLEC7Q9Y286 467 aa11.52□□□□□ -0.57
HMGN1-211ENST00000471260 hCG_2014768A0A024R1R8 64 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 A0A1W2PPL8 197 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 PRSS37A4D1T9 235 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 PHF1O43189 567 aaPredicted RBP11.51□□□□□ -0.57
HMGN1-211ENST00000471260 PPIHO43447 177 aaKnown RBP11.51□□□□□ -0.57
HMGN1-211ENST00000471260 NCR1O76036 304 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 FADS2O95864 444 aaKnown RBP11.51□□□□□ -0.57
HMGN1-211ENST00000471260 SDHAP31040 664 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 TGFBR2P37173 567 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 WNT5AP41221 380 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 MAGEB1P43366 347 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 OMPP47874 163 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 SMIM11AP58511 58 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 CDC42P60953 191 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 CCL8P80075 99 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 SCRN3Q0VDG4 424 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 PPP1R8Q12972 351 aaKnown RBP11.51□□□□□ -0.57
HMGN1-211ENST00000471260 ENDOGQ14249 297 aaKnown RBP11.51□□□□□ -0.57
HMGN1-211ENST00000471260 OXA1LQ15070 435 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 ALKBH6Q3KRA9 238 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 USP43Q70EL4 1123 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 LINC00471Q8N535 108 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 OR6Q1Q8NGQ2 317 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 CLDND2Q8NHS1 167 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 RHOXF1Q8NHV9 184 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 KLF14Q8TD94 323 aaPredicted RBP11.51□□□□□ -0.57
HMGN1-211ENST00000471260 YIPF5Q969M3 257 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 FAM46AQ96IP4 442 aaKnown RBP11.51□□□□□ -0.57
HMGN1-211ENST00000471260 DHRS1Q96LJ7 313 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 Q96M85 177 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 MMP27Q9H306 513 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 ADAM18Q9Y3Q7 739 aa11.51□□□□□ -0.57
HMGN1-211ENST00000471260 FBN1P35555 2871 aaKnown RBP11.5□□□□□ -0.57
HMGN1-211ENST00000471260 IGHV1-69-2A0A0G2JMI3 117 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 TEX13CA0A0J9YWL9 993 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 PLSCR5A0PG75 271 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 FUOMA2VDF0 154 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 CCNB2O95067 398 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 ADH4P08319 380 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 CD36P16671 472 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 GABRB1P18505 474 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 ZNF81P51508 661 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 MMP15P51511 669 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 LSM6P62312 80 aaKnown RBP11.5□□□□□ -0.57
HMGN1-211ENST00000471260 IRF3Q14653 427 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 TRIM16LQ309B1 348 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 MESTQ5EB52 335 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 ZMAT1Q5H9K5 638 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 ZNF774Q6NX45 483 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 DPY19L2P2Q6ZN68 376 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 AHSA2Q719I0 299 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 ZER1Q7Z7L7 766 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 MEX3DQ86XN8 651 aaKnown RBP11.5□□□□□ -0.57
HMGN1-211ENST00000471260 MFSD4AQ8N468 514 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 SLC25A40Q8TBP6 338 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 C4orf45Q96LM5 186 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 DIRC2Q96SL1 478 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 FEVQ99581 238 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 OR2J1Q9GZK6 312 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 SAP30LQ9HAJ7 183 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 IMPAD1Q9NX62 359 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 VSX1Q9NZR4 365 aaPredicted RBP11.5□□□□□ -0.57
HMGN1-211ENST00000471260 ZDHHC8Q9ULC8 765 aa11.5□□□□□ -0.57
HMGN1-211ENST00000471260 H7C1C5 153 aa11.49□□□□□ -0.57
HMGN1-211ENST00000471260 TPD52L2O43399 206 aaKnown RBP11.49□□□□□ -0.57
HMGN1-211ENST00000471260 KHDRBS3O75525 346 aaKnown RBP11.49□□□□□ -0.57
HMGN1-211ENST00000471260 TXNDC12O95881 172 aa11.49□□□□□ -0.57
HMGN1-211ENST00000471260 PPP1CBP62140 327 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms