RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 CSO75390 466 aaKnown RBP6.3□□□□□ -1.4
BRCA1-210ENST00000471181 LALBAP00709 142 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 MTNR1BP49286 362 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 CYB561P49447 251 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 OR1D5P58170 312 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 C19orf54Q5BKX5 351 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 YRDCQ86U90 279 aaKnown RBP6.3□□□□□ -1.4
BRCA1-210ENST00000471181 MFSD4AQ8N468 514 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 SLCO4A1Q96BD0 722 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 C11orf54Q9H0W9 315 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-210ENST00000471181 EVA1AQ9H8M9 152 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 LSM2Q9Y333 95 aaKnown RBP6.3□□□□□ -1.4
BRCA1-210ENST00000471181 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-210ENST00000471181 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-210ENST00000471181 NRG2O14511 850 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-210ENST00000471181 KCNAB3O43448 404 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 JTBO76095 146 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 GPR75O95800 540 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 HPP00738 406 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 CTXN2P0C2S0 81 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 RPL12P30050 165 aaKnown RBP6.3□□□□□ -1.4
BRCA1-210ENST00000471181 HBA1P69905 142 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 SMN1Q16637 294 aaKnown RBP6.3□□□□□ -1.4
BRCA1-210ENST00000471181 ZNF789Q5FWF6 425 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 LHFPL2Q6ZUX7 228 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 HSD11B1LQ7Z5J1 315 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 LSRQ86X29 649 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-210ENST00000471181 GALNT16Q8N428 558 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 FADS6Q8N9I5 356 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 OR4C16Q8NGL9 310 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 OR1N1Q8NGS0 311 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 OLIG1Q8TAK6 271 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 ARRDC2Q8TBH0 407 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 OR51E1Q8TCB6 317 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 TIMP4Q99727 224 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 TOLLIPQ9H0E2 274 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 LPAR5Q9H1C0 372 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 IL23AQ9NPF7 189 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 ICAM5Q9UMF0 924 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 CACNA1FO60840 1977 aa6.3□□□□□ -1.4
BRCA1-210ENST00000471181 SDCBPO00560 298 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-210ENST00000471181 RAB29O14966 203 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 TMPRSS11DO60235 418 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 UBL3O95164 117 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 SOD1P00441 154 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 CD38P28907 300 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 G6PCP35575 357 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 C17orf67Q0P5P2 114 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 C19orf57Q0VDD7 668 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 ZNF77Q15935 545 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 PRTGQ2VWP7 1150 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 CDCA2Q69YH5 1023 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-210ENST00000471181 ASTLQ6HA08 431 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-210ENST00000471181 TMEM88Q6PEY1 159 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 PLPP6Q8IY26 295 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 TMEM255BQ8WV15 326 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 MOGAT1Q96PD6 335 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 ATG101Q9BSB4 218 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 OR2D2Q9H210 308 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 SIAEQ9HAT2 523 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 IL21Q9HBE4 155 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 POLDIP2Q9Y2S7 368 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 IGKV3-7A0A075B6H7 116 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 TMEM265A0A087WTH1 108 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 CLEC18AA5D8T8 446 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 H0YGG7 62 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 M0R1X1 148 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 HCRTR1O43613 425 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 TSPAN13O95857 204 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 PMS2P11Q13670 270 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 VEZF1Q14119 521 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 VMA21Q3ZAQ7 101 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 AMMECR1LQ6DCA0 310 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 WDR73Q6P4I2 378 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 BCDIN3DQ7Z5W3 292 aaKnown RBP6.29□□□□□ -1.4
BRCA1-210ENST00000471181 MUC15Q8N387 334 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 CLEC18CQ8NCF0 446 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 OR6M1Q8NGM8 313 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 KCNE4Q8WWG9 221 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 DUS3LQ96G46 650 aaKnown RBP6.29□□□□□ -1.4
BRCA1-210ENST00000471181 CIB3Q96Q77 187 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-210ENST00000471181 ELOVL1Q9BW60 279 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 SLC25A22Q9H936 323 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 WRAP73Q9P2S5 460 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-210ENST00000471181 IGLV3-22A0A075B6J6 115 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 DRGXA6NNA5 263 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 TYROBPO43914 113 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 IL2RAP01589 272 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 CEBPBP17676 345 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 CAMPP49913 170 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 GNG4P50150 75 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 CTBSQ01459 385 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 TSPAN31Q12999 210 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 PLK5Q496M5 336 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 ZNF66Q6ZN08 573 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 MBOAT2Q6ZWT7 520 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 GLCCI1Q86VQ1 547 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 SLC38A9Q8NBW4 561 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 OR10D4PQ8NGN7 298 aa6.29□□□□□ -1.4
BRCA1-210ENST00000471181 OR6S1Q8NH40 331 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms