RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 NEDD8Q15843 81 aa9.72□□□□□ -0.85
SREBF1-209ENST00000470247 SNAI3Q3KNW1 292 aa9.72□□□□□ -0.85
SREBF1-209ENST00000470247 CCDC58Q4VC31 144 aa9.72□□□□□ -0.85
SREBF1-209ENST00000470247 WDR38Q5JTN6 314 aa9.72□□□□□ -0.85
SREBF1-209ENST00000470247 NCMAPQ5T1S8 102 aa9.72□□□□□ -0.85
SREBF1-209ENST00000470247 ZNF367Q7RTV3 350 aa9.72□□□□□ -0.85
SREBF1-209ENST00000470247 ELMOD2Q8IZ81 293 aa9.72□□□□□ -0.85
SREBF1-209ENST00000470247 ZNF101Q8IZC7 436 aa9.72□□□□□ -0.85
SREBF1-209ENST00000470247 ZFP41Q8N8Y5 198 aa9.72□□□□□ -0.85
SREBF1-209ENST00000470247 OR8B12Q8NGG6 310 aa9.72□□□□□ -0.85
SREBF1-209ENST00000470247 OR1J2Q8NGS2 313 aa9.72□□□□□ -0.85
SREBF1-209ENST00000470247 PGLYRP3Q96LB9 341 aa9.72□□□□□ -0.85
SREBF1-209ENST00000470247 C4orf45Q96LM5 186 aa9.72□□□□□ -0.85
SREBF1-209ENST00000470247 DCLRE1CQ96SD1 692 aaKnown RBP9.72□□□□□ -0.85
SREBF1-209ENST00000470247 MYCBPQ99417 103 aaPredicted RBP9.72□□□□□ -0.85
SREBF1-209ENST00000470247 MRPS26Q9BYN8 205 aaKnown RBP9.72□□□□□ -0.85
SREBF1-209ENST00000470247 PBOV1Q9GZY1 135 aa9.72□□□□□ -0.85
SREBF1-209ENST00000470247 POFUT1Q9H488 388 aa9.72□□□□□ -0.85
SREBF1-209ENST00000470247 TBCCD1Q9NVR7 557 aa9.72□□□□□ -0.85
SREBF1-209ENST00000470247 NUFIP1Q9UHK0 495 aaKnown RBP9.72□□□□□ -0.85
SREBF1-209ENST00000470247 OR52A1Q9UKL2 312 aa9.72□□□□□ -0.85
SREBF1-209ENST00000470247 LRRK2Q5S007 2527 aa9.72□□□□□ -0.85
SREBF1-209ENST00000470247 ICE1Q9Y2F5 2266 aa9.71□□□□□ -0.85
SREBF1-209ENST00000470247 LOC110117498-PIK3R3F6TDL0 507 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 PLPP2O43688 288 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 SMPD2O60906 423 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 TTRP02766 147 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 CPEP16870 476 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 PTAFRP25105 342 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 PCSK6P29122 969 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 LIPAP38571 399 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 PEX19P40855 299 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 KIR2DL3P43628 341 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 CCR9P51686 369 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 NKX6-1P78426 367 aaPredicted RBP9.71□□□□□ -0.86
SREBF1-209ENST00000470247 BSPH1Q075Z2 132 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 MRPL28Q13084 256 aaKnown RBP9.71□□□□□ -0.86
SREBF1-209ENST00000470247 SSX1Q16384 188 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 TIGD6Q17RP2 521 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 MSMPQ1L6U9 139 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 TBC1D28Q2M2D7 210 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 ZNF829Q3KNS6 432 aaPredicted RBP9.71□□□□□ -0.86
SREBF1-209ENST00000470247 ARMCX4Q5H9R4 360 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 RPL22L1Q6P5R6 122 aaKnown RBP9.71□□□□□ -0.86
SREBF1-209ENST00000470247 RFPL4BQ6ZWI9 263 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 FAM57BQ71RH2 274 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 FAM220AQ7Z4H9 259 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 FCGR1BQ92637 280 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 TMIGD2Q96BF3 282 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 SGK3Q96BR1 496 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 LYZL4Q96KX0 146 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 SOX7Q9BT81 388 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 CDH20Q9HBT6 801 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 BRD7Q9NPI1 651 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 TRIM36Q9NQ86 728 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 STARD10Q9Y365 291 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 SF3B6Q9Y3B4 125 aaKnown RBP9.71□□□□□ -0.86
SREBF1-209ENST00000470247 HELZ2Q9BYK8 2649 aaKnown RBP9.71□□□□□ -0.86
SREBF1-209ENST00000470247 PKDREJQ9NTG1 2253 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 PLCE1Q9P212 2302 aa9.71□□□□□ -0.86
SREBF1-209ENST00000470247 A0A1B0GTI1 187 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.7□□□□□ -0.86
SREBF1-209ENST00000470247 ZFPL1O95159 310 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 CLPTM1O96005 669 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 APOC1P02654 83 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 LCATP04180 440 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 CD1AP06126 327 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 ANXA2P07355 339 aaKnown RBP9.7□□□□□ -0.86
SREBF1-209ENST00000470247 CELP19835 753 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 NR4A1P22736 598 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 SLC6A9P48067 706 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 UCP2P55851 309 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 TAS2R43P59537 309 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 RPS11P62280 158 aaKnown RBP eCLIP9.7□□□□□ -0.86
SREBF1-209ENST00000470247 GPR50Q13585 617 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 DAZAP2Q15038 168 aaPredicted RBP9.7□□□□□ -0.86
SREBF1-209ENST00000470247 GLYATL3Q5SZD4 288 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 TMEM108Q6UXF1 575 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 Q6ZSR3 168 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 PHC2Q8IXK0 858 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 RDH10Q8IZV5 341 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 OR10AC1Q8NH08 325 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 HAVCR2Q8TDQ0 301 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 FAM222BQ8WU58 562 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 RGP1Q92546 391 aaPredicted RBP9.7□□□□□ -0.86
SREBF1-209ENST00000470247 SPSB4Q96A44 273 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 APOBEC3DQ96AK3 386 aaPredicted RBP9.7□□□□□ -0.86
SREBF1-209ENST00000470247 PLPPR2Q96GM1 343 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 HS3ST6Q96QI5 342 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 SPOCK3Q9BQ16 436 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 PDCD1LG2Q9BQ51 273 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 NGBQ9NPG2 151 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 N6AMT1Q9Y5N5 214 aa9.7□□□□□ -0.86
SREBF1-209ENST00000470247 FASNP49327 2511 aaKnown RBP9.7□□□□□ -0.86
SREBF1-209ENST00000470247 TRBV2A0A0J9YWF9 115 aa9.69□□□□□ -0.86
SREBF1-209ENST00000470247 A0A0U1RQV5 110 aa9.69□□□□□ -0.86
SREBF1-209ENST00000470247 PNMA8CA0A1B0GUJ8 204 aa9.69□□□□□ -0.86
SREBF1-209ENST00000470247 SHISA9B4DS77 424 aa9.69□□□□□ -0.86
SREBF1-209ENST00000470247 PRSS44E7EML9 344 aa9.69□□□□□ -0.86
SREBF1-209ENST00000470247 ATP6V1G2-DDX39BF2Z307 99 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms