RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 MALLQ13021 153 aa11.1□□□□□ -0.63
CPSF4-210ENST00000469897 ZNF181Q2M3W8 571 aa11.1□□□□□ -0.63
CPSF4-210ENST00000469897 ZNF404Q494X3 552 aa11.1□□□□□ -0.63
CPSF4-210ENST00000469897 ZBTB46Q86UZ6 589 aa11.1□□□□□ -0.63
CPSF4-210ENST00000469897 GNPDA2Q8TDQ7 276 aa11.1□□□□□ -0.63
CPSF4-210ENST00000469897 NEIL1Q96FI4 390 aaPredicted RBP11.1□□□□□ -0.63
CPSF4-210ENST00000469897 PLEKHA8Q96JA3 519 aa11.1□□□□□ -0.63
CPSF4-210ENST00000469897 ATF6BQ99941 703 aa11.1□□□□□ -0.63
CPSF4-210ENST00000469897 FAM107BQ9H098 131 aa11.1□□□□□ -0.63
CPSF4-210ENST00000469897 UFSP2Q9NUQ7 469 aa11.1□□□□□ -0.63
CPSF4-210ENST00000469897 CYB5R1Q9UHQ9 305 aa11.1□□□□□ -0.63
CPSF4-210ENST00000469897 TMCC3Q9ULS5 477 aa11.1□□□□□ -0.63
CPSF4-210ENST00000469897 IGHV2-70DA0A0C4DH43 119 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 A0A1B0GWJ7 208 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 IDH3BO43837 385 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 IRF2P14316 349 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 RRM2P31350 389 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 IFNGR2P38484 337 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 RPS27P42677 84 aaKnown RBP11.09□□□□□ -0.63
CPSF4-210ENST00000469897 TPTEP56180 551 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 HOXA4Q00056 320 aaPredicted RBP11.09□□□□□ -0.63
CPSF4-210ENST00000469897 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.09□□□□□ -0.63
CPSF4-210ENST00000469897 TRAP1Q12931 704 aaKnown RBP11.09□□□□□ -0.63
CPSF4-210ENST00000469897 ECH1Q13011 328 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 SLC9A3R2Q15599 337 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 MPPED2Q15777 294 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 PRAMEF6Q5VXH4 476 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 SHISA2Q6UWI4 295 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 PGAP1Q75T13 922 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 C1orf87Q8N0U7 546 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 PARP8Q8N3A8 854 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 SDR9C7Q8NEX9 313 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 SPRYD4Q8WW59 207 aaPredicted RBP11.09□□□□□ -0.63
CPSF4-210ENST00000469897 ZNRF4Q8WWF5 429 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 MCUR1Q96AQ8 359 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 UPRTQ96BW1 309 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 MAP6Q96JE9 813 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 CDRT15Q96T59 188 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 PNRC2Q9NPJ4 139 aaKnown RBP11.09□□□□□ -0.63
CPSF4-210ENST00000469897 MED4Q9NPJ6 270 aa11.09□□□□□ -0.63
CPSF4-210ENST00000469897 MRPL22Q9NWU5 206 aaKnown RBP11.09□□□□□ -0.63
CPSF4-210ENST00000469897 TVP23AA6NH52 213 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 TMPRSS2O15393 492 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 WIPF1O43516 503 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 FAM20BO75063 409 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 FSTL3O95633 263 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 FABP3P05413 133 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 RNASE1P07998 156 aaKnown RBP11.08□□□□□ -0.64
CPSF4-210ENST00000469897 PPIAL4GP0DN37 164 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 ZNF823P16415 610 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 CA6P23280 308 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 PYCR1P32322 319 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 GATA4P43694 442 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 MTNR1AP48039 350 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 GSSP48637 474 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 PITPNBP48739 271 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 TSPAN31Q12999 210 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 OR8G1Q15617 311 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 CLEC12AQ5QGZ9 265 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 SFRP4Q6FHJ7 346 aaPredicted RBP11.08□□□□□ -0.64
CPSF4-210ENST00000469897 ZNF841Q6ZN19 808 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 BOLLQ8N9W6 283 aaKnown RBP11.08□□□□□ -0.64
CPSF4-210ENST00000469897 OR8B3Q8NGG8 313 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 SLC25A28Q96A46 364 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 DACT3Q96B18 629 aaPredicted RBP11.08□□□□□ -0.64
CPSF4-210ENST00000469897 OR8B2Q96RD0 313 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 DDOQ99489 341 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 NUDT16L1Q9BRJ7 211 aaKnown RBP11.08□□□□□ -0.64
CPSF4-210ENST00000469897 EGLN3Q9H6Z9 239 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 CLN8Q9UBY8 286 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 CD300AQ9UGN4 299 aa11.08□□□□□ -0.64
CPSF4-210ENST00000469897 MDFIC2A0A1B0GVS7 189 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 C5orf63A6NC05 138 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 ARPC2O15144 300 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 PLATP00750 562 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 HSD17B1P14061 328 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 ANOS1P23352 680 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 CD200P41217 278 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 ZNF92Q03936 586 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 SNAI3Q3KNW1 292 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 ZNF362Q5T0B9 420 aaPredicted RBP11.07□□□□□ -0.64
CPSF4-210ENST00000469897 WDR25Q64LD2 544 aaPredicted RBP11.07□□□□□ -0.64
CPSF4-210ENST00000469897 PGBD2Q6P3X8 592 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 BRD3OSQ6XYD6 125 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 NLRC3Q7RTR2 1065 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 MRPL21Q7Z2W9 205 aaKnown RBP11.07□□□□□ -0.64
CPSF4-210ENST00000469897 CPLX4Q7Z7G2 160 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 FITM2Q8N6M3 262 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 CELF2-AS1Q8N7Q2 184 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 CYB561A3Q8NBI2 242 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 OR51L1Q8NGJ5 315 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 OR10S1Q8NGN2 331 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 OR11L1Q8NGX0 322 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 Q8TCH9 128 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 SPTSSAQ969W0 71 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 ERGIC1Q969X5 290 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 NSMCE2Q96MF7 247 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 UNKLQ9H9P5 680 aaKnown RBP11.07□□□□□ -0.64
CPSF4-210ENST00000469897 IL1RAPQ9NPH3 570 aa11.07□□□□□ -0.64
CPSF4-210ENST00000469897 MAGEL2Q9UJ55 1249 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms