RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 RPS2P15880 293 aaKnown RBP18.29■□□□□ 0.52
TTC28-204ENST00000468807 TPTEP56180 551 aa18.29■□□□□ 0.52
TTC28-204ENST00000468807 ZNF154Q13106 437 aa18.29■□□□□ 0.52
TTC28-204ENST00000468807 KRTAP27-1Q3LI81 207 aa18.29■□□□□ 0.52
TTC28-204ENST00000468807 COLCA1Q6ZS62 124 aa18.29■□□□□ 0.52
TTC28-204ENST00000468807 PGAP1Q75T13 922 aa18.29■□□□□ 0.52
TTC28-204ENST00000468807 MRPL21Q7Z2W9 205 aaKnown RBP18.29■□□□□ 0.52
TTC28-204ENST00000468807 LINC00471Q8N535 108 aa18.29■□□□□ 0.52
TTC28-204ENST00000468807 AQP11Q8NBQ7 271 aa18.29■□□□□ 0.52
TTC28-204ENST00000468807 DEFB108BQ8NET1 73 aa18.29■□□□□ 0.52
TTC28-204ENST00000468807 OR2T4Q8NH00 348 aa18.29■□□□□ 0.52
TTC28-204ENST00000468807 FAM216AQ8WUB2 273 aa18.29■□□□□ 0.52
TTC28-204ENST00000468807 SPRYD4Q8WW59 207 aaPredicted RBP18.29■□□□□ 0.52
TTC28-204ENST00000468807 SPTSSAQ969W0 71 aa18.29■□□□□ 0.52
TTC28-204ENST00000468807 MAP6Q96JE9 813 aa18.29■□□□□ 0.52
TTC28-204ENST00000468807 RBM4Q9BWF3 364 aaKnown RBP18.29■□□□□ 0.52
TTC28-204ENST00000468807 PLA2G12AQ9BZM1 189 aa18.29■□□□□ 0.52
TTC28-204ENST00000468807 PNRC2Q9NPJ4 139 aaKnown RBP18.29■□□□□ 0.52
TTC28-204ENST00000468807 ACTR3BQ9P1U1 418 aa18.29■□□□□ 0.52
TTC28-204ENST00000468807 F5H0A9 414 aaPredicted RBP18.28■□□□□ 0.52
TTC28-204ENST00000468807 M0R135 149 aa18.28■□□□□ 0.52
TTC28-204ENST00000468807 BHLHE40O14503 412 aa18.28■□□□□ 0.52
TTC28-204ENST00000468807 GASTP01350 101 aa18.28■□□□□ 0.52
TTC28-204ENST00000468807 IRF2P14316 349 aa18.28■□□□□ 0.52
TTC28-204ENST00000468807 OR9Q1Q8NGQ5 310 aa18.28■□□□□ 0.52
TTC28-204ENST00000468807 POP5Q969H6 163 aaKnown RBP18.28■□□□□ 0.52
TTC28-204ENST00000468807 ZNF799Q96GE5 643 aa18.28■□□□□ 0.52
TTC28-204ENST00000468807 TRIM15Q9C019 465 aa18.28■□□□□ 0.52
TTC28-204ENST00000468807 KCNG2Q9UJ96 466 aa18.28■□□□□ 0.52
TTC28-204ENST00000468807 FSHBP01225 129 aa18.27■□□□□ 0.52
TTC28-204ENST00000468807 SPARCP09486 303 aa18.27■□□□□ 0.52
TTC28-204ENST00000468807 ZNF12P17014 697 aa18.27■□□□□ 0.52
TTC28-204ENST00000468807 HMGA2P52926 109 aa18.27■□□□□ 0.52
TTC28-204ENST00000468807 FAM201AQ5SY85 155 aa18.27■□□□□ 0.52
TTC28-204ENST00000468807 LYPD4Q6UWN0 246 aa18.27■□□□□ 0.52
TTC28-204ENST00000468807 RBMS3Q6XE24 437 aaKnown RBP18.27■□□□□ 0.52
TTC28-204ENST00000468807 C1orf87Q8N0U7 546 aa18.27■□□□□ 0.52
TTC28-204ENST00000468807 SLC37A3Q8NCC5 494 aa18.27■□□□□ 0.52
TTC28-204ENST00000468807 OR8D4Q8NGM9 314 aa18.27■□□□□ 0.52
TTC28-204ENST00000468807 SSBP3Q9BWW4 388 aaPredicted RBP18.27■□□□□ 0.52
TTC28-204ENST00000468807 TSSK6Q9BXA6 273 aa18.27■□□□□ 0.52
TTC28-204ENST00000468807 TMEM165Q9HC07 324 aa18.27■□□□□ 0.52
TTC28-204ENST00000468807 LRCH1Q9Y2L9 728 aa18.27■□□□□ 0.52
TTC28-204ENST00000468807 PPIAL4AQ9Y536 164 aa18.27■□□□□ 0.52
TTC28-204ENST00000468807 N6AMT1Q9Y5N5 214 aa18.27■□□□□ 0.52
TTC28-204ENST00000468807 INSIG2Q9Y5U4 225 aa18.27■□□□□ 0.52
TTC28-204ENST00000468807 U3KQV3 271 aa18.27■□□□□ 0.52
TTC28-204ENST00000468807 A8MXK9 166 aa18.26■□□□□ 0.51
TTC28-204ENST00000468807 SOX14O95416 240 aa18.26■□□□□ 0.51
TTC28-204ENST00000468807 CFPP27918 469 aa18.26■□□□□ 0.51
TTC28-204ENST00000468807 RAD23AP54725 363 aa18.26■□□□□ 0.51
TTC28-204ENST00000468807 GNB2P62879 340 aa18.26■□□□□ 0.51
TTC28-204ENST00000468807 RASSF6Q6ZTQ3 369 aa18.26■□□□□ 0.51
TTC28-204ENST00000468807 DHFR2Q86XF0 187 aa18.26■□□□□ 0.51
TTC28-204ENST00000468807 KLBQ86Z14 1044 aa18.26■□□□□ 0.51
TTC28-204ENST00000468807 FITM2Q8N6M3 262 aa18.26■□□□□ 0.51
TTC28-204ENST00000468807 OR4C15Q8NGM1 316 aa18.26■□□□□ 0.51
TTC28-204ENST00000468807 ZNRF4Q8WWF5 429 aa18.26■□□□□ 0.51
TTC28-204ENST00000468807 NSL1Q96IY1 281 aa18.26■□□□□ 0.51
TTC28-204ENST00000468807 COPS4Q9BT78 406 aa18.26■□□□□ 0.51
TTC28-204ENST00000468807 NTN4Q9HB63 628 aa18.26■□□□□ 0.51
TTC28-204ENST00000468807 ESM1Q9NQ30 184 aa18.26■□□□□ 0.51
TTC28-204ENST00000468807 DDX28Q9NUL7 540 aaKnown RBP18.26■□□□□ 0.51
TTC28-204ENST00000468807 IL20Q9NYY1 176 aa18.26■□□□□ 0.51
TTC28-204ENST00000468807 NUP50Q9UKX7 468 aa18.26■□□□□ 0.51
TTC28-204ENST00000468807 POLR3KQ9Y2Y1 108 aaPredicted RBP18.26■□□□□ 0.51
TTC28-204ENST00000468807 DOCK11Q5JSL3 2073 aa18.26■□□□□ 0.51
TTC28-204ENST00000468807 GYPBP06028 91 aa18.25■□□□□ 0.51
TTC28-204ENST00000468807 WNT2P09544 360 aa18.25■□□□□ 0.51
TTC28-204ENST00000468807 MAGEA2P43356 314 aa18.25■□□□□ 0.51
TTC28-204ENST00000468807 TAF13Q15543 124 aa18.25■□□□□ 0.51
TTC28-204ENST00000468807 OR8G1Q15617 311 aa18.25■□□□□ 0.51
TTC28-204ENST00000468807 SNAI3Q3KNW1 292 aa18.25■□□□□ 0.51
TTC28-204ENST00000468807 PRAMEF6Q5VXH4 476 aa18.25■□□□□ 0.51
TTC28-204ENST00000468807 ZNF770Q6IQ21 691 aaPredicted RBP18.25■□□□□ 0.51
TTC28-204ENST00000468807 DCXRQ7Z4W1 244 aa18.25■□□□□ 0.51
TTC28-204ENST00000468807 SIGLECL1Q8N7X8 197 aa18.25■□□□□ 0.51
TTC28-204ENST00000468807 C3orf56Q8N813 242 aa18.25■□□□□ 0.51
TTC28-204ENST00000468807 OR10S1Q8NGN2 331 aa18.25■□□□□ 0.51
TTC28-204ENST00000468807 OR11L1Q8NGX0 322 aa18.25■□□□□ 0.51
TTC28-204ENST00000468807 OR2AE1Q8NHA4 323 aa18.25■□□□□ 0.51
TTC28-204ENST00000468807 TMEM246Q9BRR3 403 aa18.25■□□□□ 0.51
TTC28-204ENST00000468807 REEP1Q9H902 201 aa18.25■□□□□ 0.51
TTC28-204ENST00000468807 CENPMQ9NSP4 180 aa18.25■□□□□ 0.51
TTC28-204ENST00000468807 UFSP2Q9NUQ7 469 aa18.25■□□□□ 0.51
TTC28-204ENST00000468807 ARMC1Q9NVT9 282 aa18.25■□□□□ 0.51
TTC28-204ENST00000468807 MIOXQ9UGB7 285 aa18.25■□□□□ 0.51
TTC28-204ENST00000468807 SAMHD1Q9Y3Z3 626 aaKnown RBP18.25■□□□□ 0.51
TTC28-204ENST00000468807 COMMD3-BMI1R4GMX3 469 aa18.25■□□□□ 0.51
TTC28-204ENST00000468807 TCRBV5S2A0A599 114 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 GGT3PA6NGU5 568 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 PSKH1P11801 424 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 CA6P23280 308 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 FMO3P31513 532 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 PMELP40967 661 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 PRKXP51817 358 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 MAB21L1Q13394 359 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 CRMP1Q14194 572 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 BTNL3Q6UXE8 466 aa18.24■□□□□ 0.51
TTC28-204ENST00000468807 NLRC3Q7RTR2 1065 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms