RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 MTFP1Q9UDX5 166 aa0.45□□□□□ -2.34
SSB-208ENST00000468600 PTBP2Q9UKA9 531 aaKnown RBP0.45□□□□□ -2.34
SSB-208ENST00000468600 SNTNA6NMZ2 147 aa0.44□□□□□ -2.34
SSB-208ENST00000468600 TIMM8AO60220 97 aaPredicted RBP0.44□□□□□ -2.34
SSB-208ENST00000468600 MT-ND4P03905 459 aa0.44□□□□□ -2.34
SSB-208ENST00000468600 CTSGP08311 255 aa0.44□□□□□ -2.34
SSB-208ENST00000468600 KITLGP21583 273 aa0.44□□□□□ -2.34
SSB-208ENST00000468600 RPS23P62266 143 aaKnown RBP0.44□□□□□ -2.34
SSB-208ENST00000468600 C2orf54Q08AI8 447 aa0.44□□□□□ -2.34
SSB-208ENST00000468600 ZNF726P1Q15940 193 aa0.44□□□□□ -2.34
SSB-208ENST00000468600 FAM131AQ6UXB0 335 aa0.44□□□□□ -2.34
SSB-208ENST00000468600 CHST4Q8NCG5 386 aa0.44□□□□□ -2.34
SSB-208ENST00000468600 OR2T3Q8NH03 318 aa0.44□□□□□ -2.34
SSB-208ENST00000468600 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.44□□□□□ -2.34
SSB-208ENST00000468600 MICU1Q9BPX6 476 aa0.44□□□□□ -2.34
SSB-208ENST00000468600 TMEM43Q9BTV4 400 aa0.44□□□□□ -2.34
SSB-208ENST00000468600 NUDT9Q9BW91 350 aa0.44□□□□□ -2.34
SSB-208ENST00000468600 RIBC2Q9H4K1 309 aa0.44□□□□□ -2.34
SSB-208ENST00000468600 MED4Q9NPJ6 270 aa0.44□□□□□ -2.34
SSB-208ENST00000468600 SLC2A8Q9NY64 477 aa0.44□□□□□ -2.34
SSB-208ENST00000468600 RWDD2AQ9UIY3 292 aa0.44□□□□□ -2.34
SSB-208ENST00000468600 SSH2Q76I76 1423 aa0.44□□□□□ -2.34
SSB-208ENST00000468600 A0A1W2PNM2 257 aa0.43□□□□□ -2.34
SSB-208ENST00000468600 K7EMT4 169 aa0.43□□□□□ -2.34
SSB-208ENST00000468600 PPP1R2P9O14990 202 aa0.43□□□□□ -2.34
SSB-208ENST00000468600 SCO1O75880 301 aa0.43□□□□□ -2.34
SSB-208ENST00000468600 S1PR2O95136 353 aa0.43□□□□□ -2.34
SSB-208ENST00000468600 CLIC3O95833 236 aa0.43□□□□□ -2.34
SSB-208ENST00000468600 IGHV1-46P01743 117 aa0.43□□□□□ -2.34
SSB-208ENST00000468600 ANGP03950 147 aaKnown RBP0.43□□□□□ -2.34
SSB-208ENST00000468600 GGT1P19440 569 aa0.43□□□□□ -2.34
SSB-208ENST00000468600 POLR2IP36954 125 aaKnown RBP0.43□□□□□ -2.34
SSB-208ENST00000468600 CDH6P55285 790 aa0.43□□□□□ -2.34
SSB-208ENST00000468600 KCNJ2P63252 427 aa0.43□□□□□ -2.34
SSB-208ENST00000468600 IL5RAQ01344 420 aa0.43□□□□□ -2.34
SSB-208ENST00000468600 CYP24A1Q07973 514 aa0.43□□□□□ -2.34
SSB-208ENST00000468600 KRTAP25-1Q3LHN0 102 aa0.43□□□□□ -2.34
SSB-208ENST00000468600 GPR107Q5VW38 600 aa0.43□□□□□ -2.34
SSB-208ENST00000468600 TMEM150AQ86TG1 271 aa0.43□□□□□ -2.34
SSB-208ENST00000468600 TMEM243Q9BU79 118 aa0.43□□□□□ -2.34
SSB-208ENST00000468600 RMND5AQ9H871 391 aa0.43□□□□□ -2.34
SSB-208ENST00000468600 SUN2Q9UH99 717 aa0.43□□□□□ -2.34
SSB-208ENST00000468600 ODF2LQ9ULJ1 636 aa0.43□□□□□ -2.34
SSB-208ENST00000468600 MRPS7Q9Y2R9 242 aaKnown RBP0.43□□□□□ -2.34
SSB-208ENST00000468600 PDZK1P1A8MUH7 402 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 A8MWL6 223 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 ANGPT2O15123 496 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 KLHL41O60662 606 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 SERPINB7O75635 380 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 CDS2O95674 445 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 P0DMU3 169 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 FAM231AP0DMU4 169 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 FAM231CP0DMU5 169 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 ATP1B2P14415 290 aaPredicted RBP0.42□□□□□ -2.34
SSB-208ENST00000468600 U2AF2P26368 475 aaKnown RBP eCLIP0.42□□□□□ -2.344e-9■■□□□ 11.4
SSB-208ENST00000468600 MPIP34949 423 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 TALDO1P37837 337 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 FOXA1P55317 472 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 GK3PQ14409 553 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 NCF4Q15080 339 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 PDZD11Q5EBL8 140 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 FAM104BQ5XKR9 115 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 NPSR1Q6W5P4 371 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 DEFB119Q8N690 84 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 OR1L6Q8NGR2 347 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 OR1L4Q8NGR5 311 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 PLPPR1Q8TBJ4 325 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 YIPF5Q969M3 257 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 TMEM230Q96A57 120 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 METTL7AQ9H8H3 244 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 TAS2R5Q9NYW4 299 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 LRRC42Q9Y546 428 aa0.42□□□□□ -2.34
SSB-208ENST00000468600 A0A1B0GVL5 298 aa0.41□□□□□ -2.34
SSB-208ENST00000468600 CLRN2A0PK11 232 aa0.41□□□□□ -2.34
SSB-208ENST00000468600 PLPP1O14494 284 aa0.41□□□□□ -2.34
SSB-208ENST00000468600 SNNO75324 88 aaPredicted RBP0.41□□□□□ -2.34
SSB-208ENST00000468600 ETS2P15036 469 aa0.41□□□□□ -2.34
SSB-208ENST00000468600 KLF3P57682 345 aaPredicted RBP0.41□□□□□ -2.34
SSB-208ENST00000468600 CCDC92Q53HC0 331 aaPredicted RBP0.41□□□□□ -2.34
SSB-208ENST00000468600 HSP90AA5PQ58FG0 334 aa0.41□□□□□ -2.34
SSB-208ENST00000468600 KDELC1Q6UW63 502 aa0.41□□□□□ -2.34
SSB-208ENST00000468600 MDP1Q86V88 176 aa0.41□□□□□ -2.34
SSB-208ENST00000468600 DTNBP1Q96EV8 351 aa0.41□□□□□ -2.34
SSB-208ENST00000468600 ZNF442Q9H7R0 627 aa0.41□□□□□ -2.34
SSB-208ENST00000468600 DYRK4Q9NR20 520 aa0.41□□□□□ -2.34
SSB-208ENST00000468600 SLC35D1Q9NTN3 355 aa0.41□□□□□ -2.34
SSB-208ENST00000468600 NUP50Q9UKX7 468 aa0.41□□□□□ -2.34
SSB-208ENST00000468600 KMT2DO14686 5537 aa0.41□□□□□ -2.34
SSB-208ENST00000468600 FHOD3Q2V2M9 1422 aa0.4□□□□□ -2.34
SSB-208ENST00000468600 AKNAQ7Z591 1439 aa0.4□□□□□ -2.34
SSB-208ENST00000468600 PLXNA3P51805 1871 aa0.4□□□□□ -2.35
SSB-208ENST00000468600 SMIM26A0A096LP01 95 aa0.4□□□□□ -2.35
SSB-208ENST00000468600 IGKV1D-43A0A0B4J1Z2 117 aa0.4□□□□□ -2.35
SSB-208ENST00000468600 IFNB1P01574 187 aa0.4□□□□□ -2.35
SSB-208ENST00000468600 PRB4P10163 310 aaPredicted RBP0.4□□□□□ -2.35
SSB-208ENST00000468600 HSPD1P10809 573 aaKnown RBP0.4□□□□□ -2.35
SSB-208ENST00000468600 FOXN2P32314 431 aa0.4□□□□□ -2.35
SSB-208ENST00000468600 PRPHP41219 470 aa0.4□□□□□ -2.35
SSB-208ENST00000468600 CCNHP51946 323 aaPredicted RBP0.4□□□□□ -2.35
SSB-208ENST00000468600 PRB3Q04118 309 aaPredicted RBP0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms