RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 HLA-HP01893 362 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 MPGP29372 298 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 KIR2DL2P43627 348 aaPredicted RBP17.98■□□□□ 0.47
TMEM53-207ENST00000468117 ZNF45Q02386 682 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 FOXF2Q12947 444 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 SLC36A2Q495M3 483 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 PABPC1L2AQ5JQF8 200 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 MZT2AQ6P582 158 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 SNX29P2Q8IUI4 249 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 ACOT12Q8WYK0 555 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 PGAM5Q96HS1 289 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 RNF121Q9H920 327 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 GPR84Q9NQS5 396 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 SLC17A5Q9NRA2 495 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 ZNF503-AS2A6NEH8 195 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 A6NIN4 97 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 ECH1Q13011 328 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 OR2A2Q6IF42 318 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 VWA1Q6PCB0 445 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 UNQ6494/PRO21346Q6UXR6 183 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 SEM1Q6ZVN7 128 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 CD163Q86VB7 1156 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 KCTD12Q96CX2 325 aaKnown RBP17.98■□□□□ 0.47
TMEM53-207ENST00000468117 DIRAS2Q96HU8 199 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 ZNF275Q9NSD4 429 aaPredicted RBP17.98■□□□□ 0.47
TMEM53-207ENST00000468117 TAS2R4Q9NYW5 299 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 V9GY05 133 aa17.98■□□□□ 0.47
TMEM53-207ENST00000468117 A0A1B0GVI7 797 aa17.97■□□□□ 0.47
TMEM53-207ENST00000468117 PPP5CP53041 499 aa17.97■□□□□ 0.47
TMEM53-207ENST00000468117 PPP3R1P63098 170 aa17.97■□□□□ 0.47
TMEM53-207ENST00000468117 HGFACQ04756 655 aa17.97■□□□□ 0.47
TMEM53-207ENST00000468117 HES5Q5TA89 166 aa17.97■□□□□ 0.47
TMEM53-207ENST00000468117 RTL6Q6ICC9 239 aa17.97■□□□□ 0.47
TMEM53-207ENST00000468117 CPEB3Q8NE35 698 aaKnown RBP17.97■□□□□ 0.47
TMEM53-207ENST00000468117 WACQ9BTA9 647 aa17.97■□□□□ 0.47
TMEM53-207ENST00000468117 SPTA1P02549 2419 aa17.97■□□□□ 0.47
TMEM53-207ENST00000468117 ARPC4-TTLL3A0A0A6YYG9 625 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 ANXA2P2A6NMY6 339 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 IFITM5A6NNB3 132 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 TBX1O43435 398 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 APOC1P02654 83 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 TDGF1P3P51864 188 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 HIKESHIQ53FT3 197 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 OR1K1Q8NGR3 316 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 FGGYQ96C11 551 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 FAM122AQ96E09 287 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 CKLFQ9UBR5 152 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 FAM215AQ9Y5M1 114 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 V9GYH0 126 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 CD79AP11912 226 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 SNRPBP14678 240 aaKnown RBP17.96■□□□□ 0.47
TMEM53-207ENST00000468117 GABRA1P14867 456 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 APEX1P27695 318 aaKnown RBP17.96■□□□□ 0.47
TMEM53-207ENST00000468117 TPTEP56180 551 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 PER3P56645 1201 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 MADCAM1Q13477 382 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 SNAI3Q3KNW1 292 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 DRAM2Q6UX65 266 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 C3P1Q6ZMU1 363 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 RPRMLQ8N4K4 120 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 OR1J2Q8NGS2 313 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 TRMT10AQ8TBZ6 339 aaKnown RBP17.96■□□□□ 0.47
TMEM53-207ENST00000468117 ZCCHC14Q8WYQ9 949 aaKnown RBP17.96■□□□□ 0.47
TMEM53-207ENST00000468117 FAM71F1Q96KD3 344 aaPredicted RBP17.96■□□□□ 0.47
TMEM53-207ENST00000468117 NOX3Q9HBY0 568 aa17.96■□□□□ 0.47
TMEM53-207ENST00000468117 MYO7BQ6PIF6 2116 aa17.95■□□□□ 0.46
TMEM53-207ENST00000468117 MBD3L4A6NDZ8 208 aaPredicted RBP17.95■□□□□ 0.46
TMEM53-207ENST00000468117 MBD3L3A6NE82 208 aaPredicted RBP17.95■□□□□ 0.46
TMEM53-207ENST00000468117 MBD3L5A6NJ08 208 aaPredicted RBP17.95■□□□□ 0.46
TMEM53-207ENST00000468117 AIPO00170 330 aa17.95■□□□□ 0.46
TMEM53-207ENST00000468117 WDR1O75083 606 aa17.95■□□□□ 0.46
TMEM53-207ENST00000468117 IGFBP3P17936 291 aaPredicted RBP17.95■□□□□ 0.46
TMEM53-207ENST00000468117 CD40LGP29965 261 aa17.95■□□□□ 0.46
TMEM53-207ENST00000468117 SF3B4Q15427 424 aaKnown RBP eCLIP17.95■□□□□ 0.46
TMEM53-207ENST00000468117 ANKRD16Q6P6B7 361 aa17.95■□□□□ 0.46
TMEM53-207ENST00000468117 SAMD12Q8N8I0 201 aa17.95■□□□□ 0.46
TMEM53-207ENST00000468117 OR5H6Q8NGV6 325 aa17.95■□□□□ 0.46
TMEM53-207ENST00000468117 MBD3L2Q8NHZ7 208 aaPredicted RBP17.95■□□□□ 0.46
TMEM53-207ENST00000468117 ADAT3Q96EY9 351 aaPredicted RBP17.95■□□□□ 0.46
TMEM53-207ENST00000468117 FOXJ3Q9UPW0 622 aa17.95■□□□□ 0.46
TMEM53-207ENST00000468117 FIGNL2A6NMB9 653 aa17.94■□□□□ 0.46
TMEM53-207ENST00000468117 TOXO94900 526 aa17.94■□□□□ 0.46
TMEM53-207ENST00000468117 FSTP19883 344 aa17.94■□□□□ 0.46
TMEM53-207ENST00000468117 CLDN12P56749 244 aa17.94■□□□□ 0.46
TMEM53-207ENST00000468117 KRTAP27-1Q3LI81 207 aa17.94■□□□□ 0.46
TMEM53-207ENST00000468117 PRR30Q53SZ7 412 aaPredicted RBP17.94■□□□□ 0.46
TMEM53-207ENST00000468117 OR51A2Q8NGJ7 313 aa17.94■□□□□ 0.46
TMEM53-207ENST00000468117 OR6K3Q8NGY3 331 aa17.94■□□□□ 0.46
TMEM53-207ENST00000468117 SNRNP40Q96DI7 357 aaKnown RBP17.94■□□□□ 0.46
TMEM53-207ENST00000468117 LYZL4Q96KX0 146 aa17.94■□□□□ 0.46
TMEM53-207ENST00000468117 ATRXP46100 2492 aa17.94■□□□□ 0.46
TMEM53-207ENST00000468117 NBEAQ8NFP9 2946 aa17.94■□□□□ 0.46
TMEM53-207ENST00000468117 TNFSF13O75888 250 aa17.94■□□□□ 0.46
TMEM53-207ENST00000468117 ELK1P19419 428 aa17.94■□□□□ 0.46
TMEM53-207ENST00000468117 CCL1P22362 96 aa17.94■□□□□ 0.46
TMEM53-207ENST00000468117 IGHV1-2P23083 117 aa17.94■□□□□ 0.46
TMEM53-207ENST00000468117 RAB1AP62820 205 aa17.94■□□□□ 0.46
TMEM53-207ENST00000468117 CNIH2Q6PI25 160 aa17.94■□□□□ 0.46
TMEM53-207ENST00000468117 PLPP7Q8NBV4 271 aa17.94■□□□□ 0.46
TMEM53-207ENST00000468117 FAM57AQ8TBR7 257 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms