RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 LRP12Q9Y561 859 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 TMEM14AQ9Y6G1 99 aa9.43□□□□□ -0.9
MSH5-212ENST00000467319 CHD3Q12873 2000 aaKnown RBP9.43□□□□□ -0.9
MSH5-212ENST00000467319 A0A096LNT2 108 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 C17orf100A8MU93 164 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 J3QRE1 110 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 MPZL2O60487 215 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 LCATP04180 440 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 CSF3P09919 207 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 NAT2P11245 290 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 SLC6A9P48067 706 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 CX3CR1P49238 355 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 PRKXP51817 358 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 HCCSP53701 268 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 ZNF121P58317 390 aaPredicted RBP9.42□□□□□ -0.9
MSH5-212ENST00000467319 ADARB1P78563 741 aaKnown RBP9.42□□□□□ -0.9
MSH5-212ENST00000467319 GK2Q14410 553 aaPredicted RBP9.42□□□□□ -0.9
MSH5-212ENST00000467319 HLXQ14774 488 aaPredicted RBP9.42□□□□□ -0.9
MSH5-212ENST00000467319 ZMAT1Q5H9K5 638 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 ZNF691Q5VV52 312 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 DEGS2Q6QHC5 323 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 LRRN1Q6UXK5 716 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 SLC35F2Q8IXU6 374 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 ZNF525Q8N782 197 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 OR51G2Q8NGK0 314 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 OR5L1Q8NGL2 311 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 SNX33Q8WV41 574 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 APH1BQ8WW43 257 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 NRG4Q8WWG1 115 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 NEU4Q8WWR8 484 aaPredicted RBP9.42□□□□□ -0.9
MSH5-212ENST00000467319 ASB17Q8WXJ9 295 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 SPSB4Q96A44 273 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 COX4I2Q96KJ9 171 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 Q96MF0 132 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 OR8B4Q96RC9 309 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 VRK1Q99986 396 aaPredicted RBP9.42□□□□□ -0.9
MSH5-212ENST00000467319 TMUB1Q9BVT8 246 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 RAB1BQ9H0U4 201 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 OPA3Q9H6K4 179 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 NIPAL2Q9H841 368 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 MYOZ1Q9NP98 299 aaPredicted RBP9.42□□□□□ -0.9
MSH5-212ENST00000467319 PTTG3PQ9NZH4 202 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 H2AFY2Q9P0M6 372 aaPredicted RBP9.42□□□□□ -0.9
MSH5-212ENST00000467319 GPR160Q9UJ42 338 aa9.42□□□□□ -0.9
MSH5-212ENST00000467319 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.42□□□□□ -0.9
MSH5-212ENST00000467319 ANK3Q12955 4377 aaKnown RBP9.42□□□□□ -0.9
MSH5-212ENST00000467319 NSD1Q96L73 2696 aaPredicted RBP9.42□□□□□ -0.9
MSH5-212ENST00000467319 TANC2Q9HCD6 1990 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 TRIM64A6NGJ6 449 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 TRIM64BA6NI03 449 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 IQCF6A8MYZ5 107 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 TIMM8AO60220 97 aaPredicted RBP9.41□□□□□ -0.9
MSH5-212ENST00000467319 SSX4O60224 188 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 LILRA1O75019 489 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 ZNF254O75437 659 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 SRSF10O75494 262 aaKnown RBP9.41□□□□□ -0.9
MSH5-212ENST00000467319 WBP4O75554 376 aaKnown RBP9.41□□□□□ -0.9
MSH5-212ENST00000467319 APOL3O95236 402 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 APOC1P02654 83 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 MT-ND5P03915 603 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 ERCC1P07992 297 aaPredicted RBP9.41□□□□□ -0.9
MSH5-212ENST00000467319 CD55P08174 381 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 H2BFMP0C1H6 154 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 SLC2A1P11166 492 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 HSD11B1P28845 292 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 DCTDP32321 178 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 LIPAP38571 399 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 MTNR1AP48039 350 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 ZNF81P51508 661 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 DSCR9P59020 149 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 MRPS11P82912 194 aaKnown RBP9.41□□□□□ -0.9
MSH5-212ENST00000467319 ZNF92Q03936 586 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 ZNF91Q05481 1191 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 RIPK1Q13546 671 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 TAF13Q15543 124 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 MOGQ16653 247 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 CLEC12BQ2HXU8 276 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 PCGF3Q3KNV8 242 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 FAM209AQ5JX71 171 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 GLYATL3Q5SZD4 288 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 ZNF684Q5T5D7 378 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 ZNF322Q6U7Q0 402 aaPredicted RBP9.41□□□□□ -0.9
MSH5-212ENST00000467319 Q6ZR03 302 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 SSX6Q7RTT6 188 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 OR52H1Q8NGJ2 320 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 C10orf105Q8TEF2 133 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 THEM6Q8WUY1 208 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 CMBLQ96DG6 245 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 ADI1Q9BV57 179 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 CYSLTR2Q9NS75 346 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 FAM206AQ9NX38 181 aa9.41□□□□□ -0.9
MSH5-212ENST00000467319 TLN2Q9Y4G6 2542 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 IGHV4-30-2A0A087WSY4 118 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 A0A1W2PQL4 384 aaPredicted RBP9.4□□□□□ -0.9
MSH5-212ENST00000467319 PLSCR5A0PG75 271 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 VWC2LB2RUY7 222 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 H0YAE9 185 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 H0YJX3 145 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 PHYHO14832 338 aa9.4□□□□□ -0.9
MSH5-212ENST00000467319 XRCC2O43543 280 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms