RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 LSM1O15116 133 aaKnown RBP4.55□□□□□ -1.68
PTCD3-207ENST00000467273 ZNF208O43345 1280 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 SSX5O60225 188 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 SMIM24O75264 130 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 RBBP9O75884 186 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 VAMP5O95183 116 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 APOA1P02647 267 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 RPS17P08708 135 aaKnown RBP4.55□□□□□ -1.68
PTCD3-207ENST00000467273 KRT16P08779 473 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 RBP1P09455 135 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 MYZAPP0CAP1 466 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 OR8G3PP0DMU2 310 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 TFPIP10646 304 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 ACP2P11117 423 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 ZNF12P17014 697 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 OMGP23515 440 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 CLDN8P56748 225 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 PROK1P58294 105 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 SELENOVP59797 346 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 SLC3A1Q07837 685 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 MERTKQ12866 999 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 SKP2Q13309 424 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 FAM189A2Q15884 450 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 SLC36A3Q495N2 470 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 KLF17Q5JT82 389 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-207ENST00000467273 CLEC6AQ6EIG7 209 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 WDR88Q6ZMY6 472 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 AAED1Q7RTV5 226 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 GRINAQ7Z429 371 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 CMC1Q7Z7K0 106 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 SERPINA12Q8IW75 414 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 ZBED8Q8IZ13 594 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 OFCC1Q8IZS5 231 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 BPIFCQ8NFQ6 507 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 RNASE8Q8TDE3 154 aaKnown RBP4.55□□□□□ -1.68
PTCD3-207ENST00000467273 ACTRT1Q8TDG2 376 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 PYROXD1Q8WU10 500 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 MITD1Q8WV92 249 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 DCAKDQ8WVC6 231 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 TSEN15Q8WW01 171 aaKnown RBP4.55□□□□□ -1.68
PTCD3-207ENST00000467273 RAB8BQ92930 207 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 CADM1Q9BY67 442 aaKnown RBP4.55□□□□□ -1.68
PTCD3-207ENST00000467273 NMUR2Q9GZQ4 415 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 NECAP2Q9NVZ3 263 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 C1RLQ9NZP8 487 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 PEF1Q9UBV8 284 aaKnown RBP4.55□□□□□ -1.68
PTCD3-207ENST00000467273 SEC14L4Q9UDX3 406 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 PURGQ9UJV8 347 aaKnown RBP4.55□□□□□ -1.68
PTCD3-207ENST00000467273 FBXL3Q9UKT7 428 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 WIPI2Q9Y4P8 454 aa4.55□□□□□ -1.68
PTCD3-207ENST00000467273 A0A096LPK6 155 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 TCRBV9S1A1TA0A576 114 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 A8MXK9 166 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 K7EQM0 130 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 EIF3HO15372 352 aaKnown RBP eCLIP4.54□□□□□ -1.68
PTCD3-207ENST00000467273 XPNPEP2O43895 674 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 ATP6V1G1O75348 118 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 ZNF432O94892 652 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 IGHMP01871 453 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 C2P06681 752 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 ZNF35P13682 527 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 PRKACAP17612 351 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 HSPA13P48723 471 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 CCR4P51679 360 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 OR2B6P58173 313 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 TUBA4AP68366 448 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 LCN2P80188 198 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 HSPB3Q12988 150 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 ZNF154Q13106 437 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 FASTKD3Q14CZ7 662 aaKnown RBP4.54□□□□□ -1.68
PTCD3-207ENST00000467273 MOGQ16653 247 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 TRMT5Q32P41 509 aaKnown RBP4.54□□□□□ -1.68
PTCD3-207ENST00000467273 SAPCD1Q5SSQ6 148 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 DCST2Q5T1A1 773 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.54□□□□□ -1.68
PTCD3-207ENST00000467273 CCNJQ5T5M9 372 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 FAM91A1Q658Y4 838 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 ZNF620Q6ZNG0 422 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 RTN4RL2Q86UN3 420 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 AKAP14Q86UN6 197 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 COMMD1Q8N668 190 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 TMEM217Q8N7C4 229 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 ZIC4Q8N9L1 334 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 PNLDC1Q8NA58 520 aaKnown RBP4.54□□□□□ -1.68
PTCD3-207ENST00000467273 UXS1Q8NBZ7 420 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 OR9K2Q8NGE7 335 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 OR52N4Q8NGI2 321 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 ANGPTL6Q8NI99 470 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 RAB40AQ8WXH6 277 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 DYRK2Q92630 601 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 TNFRSF14Q92956 283 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 ZNF524Q96C55 264 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 DDIT4LQ96D03 193 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 AURKBQ96GD4 344 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-207ENST00000467273 ZNF607Q96SK3 696 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 ZNF382Q96SR6 550 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 CENPHQ9H3R5 247 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 SLCO1C1Q9NYB5 712 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 IL20RAQ9UHF4 553 aa4.54□□□□□ -1.68
PTCD3-207ENST00000467273 INSIG2Q9Y5U4 225 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms