RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 NIPSNAP1Q9BPW8 284 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 HOPXQ9BPY8 73 aaPredicted RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 AIF1LQ9BQI0 150 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 UTP23Q9BRU9 249 aaKnown RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 HINT2Q9BX68 163 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 CACNG6Q9BXT2 260 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 UGT2B28Q9BY64 529 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 DEFB126Q9BYW3 111 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 ELOVL4Q9GZR5 314 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 ELOVL6Q9H5J4 265 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 REEP4Q9H6H4 257 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 IL1RL2Q9HB29 575 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 ELL3Q9HB65 397 aaPredicted RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 CSNK1G1Q9HCP0 422 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 IMP3Q9NV31 184 aaKnown RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 MRPL22Q9NWU5 206 aaKnown RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 GSKIPQ9P0R6 139 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 SLC17A7Q9P2U7 560 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 GHRLQ9UBU3 117 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 SEC14L4Q9UDX3 406 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 OR12D3Q9UGF7 316 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 ZNF639Q9UID6 485 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 LEF1Q9UJU2 399 aaPredicted RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 DKKL1Q9UK85 242 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 IKZF3Q9UKT9 509 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 CLEC4EQ9ULY5 219 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 SNX12Q9UMY4 172 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 PSG11Q9UQ72 335 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 SLC22A13Q9Y226 551 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 RHBDD3Q9Y3P4 386 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 TBL2Q9Y4P3 447 aaKnown RBP2.78□□□□□ -1.96
VPS13D-203ENST00000466732 SLCO1B1Q9Y6L6 691 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 KIAA1551Q9HCM1 1747 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 BICRAQ9NZM4 1560 aa2.78□□□□□ -1.96
VPS13D-203ENST00000466732 CD109Q6YHK3 1445 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 ANKARQ7Z5J8 1434 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 ATP10DQ9P241 1426 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 ARHGEF28Q8N1W1 1705 aaKnown RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 A0A087WZY1 265 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 TRAV25A0A0B4J276 109 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 KLF18A0A0U1RQI7 1052 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 A0A1B0GUH1 482 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 A0A1B0GW15 77 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 A0A1W2PNV4 684 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 A0A1W2PQL4 384 aaPredicted RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 TP53I11O14683 189 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 LCMT2O60294 686 aaKnown RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 RAMP3O60896 148 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 ZMPSTE24O75844 475 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 IFNA21P01568 189 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 HTR1AP08908 422 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 ANXA4P09525 319 aaPredicted RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 RAB3BP20337 219 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 PVALBP20472 110 aaPredicted RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 NPR2P20594 1047 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 UQCRC2P22695 453 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 DRD3P35462 400 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 GRIA1P42261 906 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 PTGFRP43088 359 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 MAGEA3P43357 314 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 TNFRSF4P43489 277 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 GABRA4P48169 554 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 KCNJ3P48549 501 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 CSNK1EP49674 416 aaKnown RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 PLA2G16P53816 162 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 RAB25P57735 213 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 TAS2R39P59534 338 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 DNAJB13P59910 316 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 OGDHQ02218 1023 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 BDH1Q02338 343 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 CHRNB3Q05901 458 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 TWF1Q12792 350 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 SLAMF1Q13291 335 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 GK2Q14410 553 aaPredicted RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 GUCA2BQ16661 112 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 VPS26BQ4G0F5 336 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 PTPN20Q4JDL3 420 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 N4BP2L1Q5TBK1 243 aaPredicted RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 NCR3LG1Q68D85 454 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 ADNP2Q6IQ32 1131 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 PLET1Q6UQ28 207 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 TEX261Q6UWH6 196 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 HSDL2Q6YN16 418 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 EIF3MQ7L2H7 374 aaKnown RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 MRPL21Q7Z2W9 205 aaKnown RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 HSD17B13Q7Z5P4 300 aaPredicted RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 S100A7AQ86SG5 101 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 LYG2Q86SG7 212 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 TMEM135Q86UB9 458 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 WDFY1Q8IWB7 410 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 NRMQ8IXM6 262 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 C8orf59Q8N0T1 100 aaPredicted RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF557Q8N988 423 aaPredicted RBP2.77□□□□□ -1.97
VPS13D-203ENST00000466732 CYB561A3Q8NBI2 242 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 HSD17B11Q8NBQ5 300 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 OR2M7Q8NG81 312 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 OR4A15Q8NGL6 344 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 OR13F1Q8NGS4 319 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 OR5J2Q8NH18 312 aa2.77□□□□□ -1.97
VPS13D-203ENST00000466732 PHF10Q8WUB8 498 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms