RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 CRYBB2P43320 205 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 NR4A2P43354 598 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 MAGEB1P43366 347 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 SLC15A1P46059 708 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 RAD23AP54725 363 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 KRTAP1-1Q07627 177 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 TMED1Q13445 227 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 GK2Q14410 553 aaPredicted RBP8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 KLHL12Q53G59 568 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 LCN1P1Q5VSP4 162 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 DEGS2Q6QHC5 323 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 Q6ZR03 302 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 MEPCEQ7L2J0 689 aaKnown RBP8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 GID4Q8IVV7 300 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 ZNF540Q8NDQ6 660 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 RDH5Q92781 318 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 YIPF5Q969M3 257 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 SPSB4Q96A44 273 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 OTULINQ96BN8 352 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 MBOAT4Q96T53 435 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 SLC29A1Q99808 456 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 COPS4Q9BT78 406 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 REPIN1Q9BWE0 567 aaKnown RBP8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 RIBC2Q9H4K1 309 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 KLHDC2Q9Y2U9 406 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 ANK3Q12955 4377 aaKnown RBP8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 CSPG4Q6UVK1 2322 aa8.06□□□□□ -1.12
SDCCAG3-208ENST00000466579 PLSCR5A0PG75 271 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 DLGAP1O14490 977 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 TIMM8AO60220 97 aaPredicted RBP8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 APOC1P02654 83 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 LCATP04180 440 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 HEXAP06865 529 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 LYNP07948 512 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 TACSTD2P09758 323 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 SELEP16581 610 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 COL8A2P25067 703 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 HTR1FP30939 366 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 DCTDP32321 178 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 TMEM33P57088 247 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 SNRPGP62308 76 aaKnown RBP8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 ROM1Q03395 351 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 HLXQ14774 488 aaPredicted RBP8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 SNAI3Q3KNW1 292 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 ZBTB49Q6ZSB9 765 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 BCDIN3DQ7Z5W3 292 aaKnown RBP8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 OR8G5Q8NG78 346 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 STMN2Q93045 179 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 RDH12Q96NR8 316 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 IL4I1Q96RQ9 567 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 MNTQ99583 582 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 SLC30A2Q9BRI3 323 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 PIMREGQ9BSJ6 248 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 GSX1Q9H4S2 264 aaPredicted RBP8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 OPA3Q9H6K4 179 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 NIPAL2Q9H841 368 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 SP140LQ9H930 580 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 CHODLQ9H9P2 273 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 ADGRL4Q9HBW9 690 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 C8orf4Q9NR00 106 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 CENPMQ9NSP4 180 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 PTTG3PQ9NZH4 202 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 WARS2Q9UGM6 360 aaKnown RBP8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 ORC6Q9Y5N6 252 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 TMEM14AQ9Y6G1 99 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 ABCA1O95477 2261 aa8.05□□□□□ -1.12
SDCCAG3-208ENST00000466579 NSD1Q96L73 2696 aaPredicted RBP8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 C5orf63A6NC05 138 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 ACOD1A6NK06 481 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 PRR32B1ATL7 298 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 SLC16A6O15403 523 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 XRCC2O43543 280 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 LILRA1O75019 489 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 LY6G6DO95868 133 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 GABRB1P18505 474 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 USF1P22415 310 aaPredicted RBP8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 NAA10P41227 235 aaPredicted RBP8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 CX3CR1P49238 355 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 PRKXP51817 358 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 CDC42P60953 191 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 RPS7P62081 194 aaKnown RBP8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 CCL8P80075 99 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 ZNF92Q03936 586 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 MALLQ13021 153 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 TAF13Q15543 124 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 OCLNQ16625 522 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 GLYATL3Q5SZD4 288 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 OR2T2Q6IF00 324 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 KRT74Q7RTS7 529 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 OR52H1Q8NGJ2 320 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 ASB17Q8WXJ9 295 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 ITFG2Q969R8 447 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 EME1Q96AY2 570 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 C1orf159Q96HA4 380 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 ZNF582Q96NG8 517 aaPredicted RBP8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 CNN2Q99439 309 aaKnown RBP8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 SMR3AQ99954 134 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 BPESC1Q9GZL8 116 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 MSL2Q9HCI7 577 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 H2AFY2Q9P0M6 372 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms