RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 IGHV2-70DA0A0C4DH43 119 aa16.02■□□□□ 0.16
COL9A3-206ENST00000466532 A0A1B0GWJ7 208 aa16.02■□□□□ 0.16
COL9A3-206ENST00000466532 OR6C68A6NDL8 312 aa16.02■□□□□ 0.16
COL9A3-206ENST00000466532 LCATP04180 440 aa16.02■□□□□ 0.16
COL9A3-206ENST00000466532 PPIAL4GP0DN37 164 aa16.02■□□□□ 0.16
COL9A3-206ENST00000466532 IGHV4-38-2P0DP08 117 aa16.02■□□□□ 0.16
COL9A3-206ENST00000466532 IRF2P14316 349 aa16.02■□□□□ 0.16
COL9A3-206ENST00000466532 IFNGR2P38484 337 aa16.02■□□□□ 0.16
COL9A3-206ENST00000466532 PMELP40967 661 aa16.02■□□□□ 0.16
COL9A3-206ENST00000466532 TRAP1Q12931 704 aaKnown RBP16.02■□□□□ 0.16
COL9A3-206ENST00000466532 MALLQ13021 153 aa16.02■□□□□ 0.16
COL9A3-206ENST00000466532 FAM201AQ5SY85 155 aa16.02■□□□□ 0.16
COL9A3-206ENST00000466532 NAA40Q86UY6 237 aa16.02■□□□□ 0.16
COL9A3-206ENST00000466532 OR8B3Q8NGG8 313 aa16.02■□□□□ 0.16
COL9A3-206ENST00000466532 OR8B2Q96RD0 313 aa16.02■□□□□ 0.16
COL9A3-206ENST00000466532 ZNF747Q9BV97 191 aa16.02■□□□□ 0.16
COL9A3-206ENST00000466532 CYB5R1Q9UHQ9 305 aa16.02■□□□□ 0.16
COL9A3-206ENST00000466532 IDH3BO43837 385 aa16.01■□□□□ 0.15
COL9A3-206ENST00000466532 FSTL3O95633 263 aa16.01■□□□□ 0.15
COL9A3-206ENST00000466532 FABP3P05413 133 aa16.01■□□□□ 0.15
COL9A3-206ENST00000466532 RRM2P31350 389 aa16.01■□□□□ 0.15
COL9A3-206ENST00000466532 MSX2P35548 267 aaPredicted RBP16.01■□□□□ 0.15
COL9A3-206ENST00000466532 GGT2P36268 569 aa16.01■□□□□ 0.15
COL9A3-206ENST00000466532 GATA4P43694 442 aa16.01■□□□□ 0.15
COL9A3-206ENST00000466532 GSSP48637 474 aa16.01■□□□□ 0.15
COL9A3-206ENST00000466532 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.01■□□□□ 0.15
COL9A3-206ENST00000466532 MAB21L1Q13394 359 aa16.01■□□□□ 0.15
COL9A3-206ENST00000466532 PGAP1Q75T13 922 aa16.01■□□□□ 0.15
COL9A3-206ENST00000466532 NLRC3Q7RTR2 1065 aa16.01■□□□□ 0.15
COL9A3-206ENST00000466532 RAB40AQ8WXH6 277 aa16.01■□□□□ 0.15
COL9A3-206ENST00000466532 SLCO4A1Q96BD0 722 aa16.01■□□□□ 0.15
COL9A3-206ENST00000466532 UPRTQ96BW1 309 aa16.01■□□□□ 0.15
COL9A3-206ENST00000466532 NSMCE2Q96MF7 247 aa16.01■□□□□ 0.15
COL9A3-206ENST00000466532 FAM107BQ9H098 131 aa16.01■□□□□ 0.15
COL9A3-206ENST00000466532 PNRC2Q9NPJ4 139 aaKnown RBP16.01■□□□□ 0.15
COL9A3-206ENST00000466532 TMCC3Q9ULS5 477 aa16.01■□□□□ 0.15
COL9A3-206ENST00000466532 TRAV40A0A0B4J280 105 aa16■□□□□ 0.15
COL9A3-206ENST00000466532 RNASE1P07998 156 aaKnown RBP16■□□□□ 0.15
COL9A3-206ENST00000466532 HSD17B1P14061 328 aa16■□□□□ 0.15
COL9A3-206ENST00000466532 MTNR1AP48039 350 aa16■□□□□ 0.15
COL9A3-206ENST00000466532 PITPNBP48739 271 aa16■□□□□ 0.15
COL9A3-206ENST00000466532 TPTEP56180 551 aa16■□□□□ 0.15
COL9A3-206ENST00000466532 SLC35F1Q5T1Q4 408 aa16■□□□□ 0.15
COL9A3-206ENST00000466532 ZNF620Q6ZNG0 422 aa16■□□□□ 0.15
COL9A3-206ENST00000466532 CELF2-AS1Q8N7Q2 184 aa16■□□□□ 0.15
COL9A3-206ENST00000466532 OR11L1Q8NGX0 322 aa16■□□□□ 0.15
COL9A3-206ENST00000466532 GNPDA2Q8TDQ7 276 aa16■□□□□ 0.15
COL9A3-206ENST00000466532 SLC25A28Q96A46 364 aa16■□□□□ 0.15
COL9A3-206ENST00000466532 DACT3Q96B18 629 aaPredicted RBP16■□□□□ 0.15
COL9A3-206ENST00000466532 MRPL22Q9NWU5 206 aaKnown RBP16■□□□□ 0.15
COL9A3-206ENST00000466532 CLN8Q9UBY8 286 aa16■□□□□ 0.15
COL9A3-206ENST00000466532 SOX21Q9Y651 276 aaPredicted RBP16■□□□□ 0.15
COL9A3-206ENST00000466532 PKD1L1Q8TDX9 2849 aa15.99■□□□□ 0.15
COL9A3-206ENST00000466532 ARPC2O15144 300 aa15.99■□□□□ 0.15
COL9A3-206ENST00000466532 FAM20BO75063 409 aa15.99■□□□□ 0.15
COL9A3-206ENST00000466532 PLATP00750 562 aa15.99■□□□□ 0.15
COL9A3-206ENST00000466532 ZNF823P16415 610 aa15.99■□□□□ 0.15
COL9A3-206ENST00000466532 CD200P41217 278 aa15.99■□□□□ 0.15
COL9A3-206ENST00000466532 TSPAN31Q12999 210 aa15.99■□□□□ 0.15
COL9A3-206ENST00000466532 SAMD4BQ5PRF9 694 aaKnown RBP15.99■□□□□ 0.15
COL9A3-206ENST00000466532 PRAMEF6Q5VXH4 476 aa15.99■□□□□ 0.15
COL9A3-206ENST00000466532 PGBD2Q6P3X8 592 aa15.99■□□□□ 0.15
COL9A3-206ENST00000466532 SHISA2Q6UWI4 295 aa15.99■□□□□ 0.15
COL9A3-206ENST00000466532 LYPD2Q6UXB3 125 aa15.99■□□□□ 0.15
COL9A3-206ENST00000466532 DCDC5Q6ZRR9 648 aa15.99■□□□□ 0.15
COL9A3-206ENST00000466532 C9orf139Q6ZV77 190 aa15.99■□□□□ 0.15
COL9A3-206ENST00000466532 MRPL21Q7Z2W9 205 aaKnown RBP15.99■□□□□ 0.15
COL9A3-206ENST00000466532 C19orf18Q8NEA5 215 aa15.99■□□□□ 0.15
COL9A3-206ENST00000466532 Q8TCH9 128 aa15.99■□□□□ 0.15
COL9A3-206ENST00000466532 SPRYD4Q8WW59 207 aaPredicted RBP15.99■□□□□ 0.15
COL9A3-206ENST00000466532 ERGIC1Q969X5 290 aa15.99■□□□□ 0.15
COL9A3-206ENST00000466532 MAP6Q96JE9 813 aa15.99■□□□□ 0.15
COL9A3-206ENST00000466532 NUDT16L1Q9BRJ7 211 aaKnown RBP15.99■□□□□ 0.15
COL9A3-206ENST00000466532 NSRP1Q9H0G5 558 aaKnown RBP15.99■□□□□ 0.15
COL9A3-206ENST00000466532 EGLN3Q9H6Z9 239 aa15.99■□□□□ 0.15
COL9A3-206ENST00000466532 UFSP2Q9NUQ7 469 aa15.99■□□□□ 0.15
COL9A3-206ENST00000466532 KCNG2Q9UJ96 466 aa15.99■□□□□ 0.15
COL9A3-206ENST00000466532 KIR2DS1A0A191URI9 304 aa15.98■□□□□ 0.15
COL9A3-206ENST00000466532 M0R135 149 aa15.98■□□□□ 0.15
COL9A3-206ENST00000466532 TMPRSS2O15393 492 aa15.98■□□□□ 0.15
COL9A3-206ENST00000466532 PYCR1P32322 319 aa15.98■□□□□ 0.15
COL9A3-206ENST00000466532 RAD23AP54725 363 aa15.98■□□□□ 0.15
COL9A3-206ENST00000466532 SLC9A3R2Q15599 337 aa15.98■□□□□ 0.15
COL9A3-206ENST00000466532 OR8G1Q15617 311 aa15.98■□□□□ 0.15
COL9A3-206ENST00000466532 CLEC12AQ5QGZ9 265 aa15.98■□□□□ 0.15
COL9A3-206ENST00000466532 ZDHHC21Q8IVQ6 265 aa15.98■□□□□ 0.15
COL9A3-206ENST00000466532 PGAM4Q8N0Y7 254 aa15.98■□□□□ 0.15
COL9A3-206ENST00000466532 OR52L1Q8NGH7 329 aa15.98■□□□□ 0.15
COL9A3-206ENST00000466532 SPTSSAQ969W0 71 aa15.98■□□□□ 0.15
COL9A3-206ENST00000466532 ZNF799Q96GE5 643 aa15.98■□□□□ 0.15
COL9A3-206ENST00000466532 CDRT15Q96T59 188 aa15.98■□□□□ 0.15
COL9A3-206ENST00000466532 IL1RAPQ9NPH3 570 aa15.98■□□□□ 0.15
COL9A3-206ENST00000466532 CD300AQ9UGN4 299 aa15.98■□□□□ 0.15
COL9A3-206ENST00000466532 CLDN34H7C241 214 aa15.97■□□□□ 0.15
COL9A3-206ENST00000466532 PHYHO14832 338 aa15.97■□□□□ 0.15
COL9A3-206ENST00000466532 WIPF1O43516 503 aa15.97■□□□□ 0.15
COL9A3-206ENST00000466532 SNX3O60493 162 aa15.97■□□□□ 0.15
COL9A3-206ENST00000466532 CA6P23280 308 aa15.97■□□□□ 0.15
COL9A3-206ENST00000466532 RPS27P42677 84 aaKnown RBP15.97■□□□□ 0.15
COL9A3-206ENST00000466532 MPPED2Q15777 294 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms