RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 GDNFP39905 211 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 PSMB10P40306 273 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 CCR9P51686 369 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 SCAND1P57086 179 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 IKZF1Q13422 519 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 MCHR2Q969V1 340 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 ZNF837Q96EG3 531 aaPredicted RBP16.41■□□□□ 0.22
CAPN3-209ENST00000466222 MRPL22Q9NWU5 206 aaKnown RBP16.41■□□□□ 0.22
CAPN3-209ENST00000466222 SLCO1C1Q9NYB5 712 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 FKBP7Q9Y680 259 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 MAP1BP46821 2468 aaKnown RBP16.41■□□□□ 0.22
CAPN3-209ENST00000466222 KALRNO60229 2985 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 RELNP78509 3460 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 MEIKINA0A087WXM9 373 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 PIN1P1O15428 100 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 IGHV3-9P01782 118 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 HLA-DQA2P01906 255 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 QDPRP09417 244 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 CDAP32320 146 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 FAM180AQ6UWF9 173 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 TIGD4Q8IY51 512 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 ANGPTL6Q8NI99 470 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 CALHM2Q9HA72 323 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 KLHL9Q9P2J3 617 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 A0A0B4J203 849 aa16.4■□□□□ 0.22
CAPN3-209ENST00000466222 CRYABP02511 175 aaKnown RBP16.4■□□□□ 0.22
CAPN3-209ENST00000466222 SNRPD2P62316 118 aaKnown RBP16.4■□□□□ 0.22
CAPN3-209ENST00000466222 HIST3H3Q16695 136 aa16.4■□□□□ 0.22
CAPN3-209ENST00000466222 ZNF324BQ6AW86 544 aaPredicted RBP16.4■□□□□ 0.22
CAPN3-209ENST00000466222 SYT9Q86SS6 491 aa16.4■□□□□ 0.22
CAPN3-209ENST00000466222 GIMAP1Q8WWP7 306 aa16.4■□□□□ 0.22
CAPN3-209ENST00000466222 THRSPQ92748 146 aa16.4■□□□□ 0.22
CAPN3-209ENST00000466222 SNRNP40Q96DI7 357 aaKnown RBP16.4■□□□□ 0.22
CAPN3-209ENST00000466222 RADILQ96JH8 1075 aa16.4■□□□□ 0.22
CAPN3-209ENST00000466222 TRIB1Q96RU8 372 aa16.4■□□□□ 0.22
CAPN3-209ENST00000466222 MGAT4AQ9UM21 535 aa16.4■□□□□ 0.22
CAPN3-209ENST00000466222 KLHDC2Q9Y2U9 406 aa16.4■□□□□ 0.22
CAPN3-209ENST00000466222 PSMD9O00233 223 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 ZNF593O00488 134 aaPredicted RBP16.39■□□□□ 0.21
CAPN3-209ENST00000466222 PEX14O75381 377 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 UPK3AO75631 287 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 KRT33AO76009 404 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 Q499Y3 187 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 LRRN1Q6UXK5 716 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 LINGO2Q7L985 606 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 OR6N1Q8NGY5 312 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 S100A16Q96FQ6 103 aaKnown RBP16.39■□□□□ 0.21
CAPN3-209ENST00000466222 RBP7Q96R05 134 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 GFI1Q99684 422 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 C20orf85Q9H1P6 137 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 SCP2D1Q9UJQ7 156 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 NPTNQ9Y639 398 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 PKD1L2Q7Z442 2459 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 SLC22A20A6NK97 555 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 PRR32B1ATL7 298 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 PHYHO14832 338 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 MT-ND4P03905 459 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 TPOP07202 933 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 CRABP1P29762 137 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 ALKBH1Q13686 389 aaKnown RBP16.39■□□□□ 0.21
CAPN3-209ENST00000466222 LY6DQ14210 128 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 RNASE12Q5GAN4 147 aaKnown RBP16.39■□□□□ 0.21
CAPN3-209ENST00000466222 THEM4Q5T1C6 240 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 ZBTB37Q5TC79 503 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 ZNF585AQ6P3V2 769 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 AAED1Q7RTV5 226 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 DPY19L4Q7Z388 723 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 ADGRE4PQ86SQ3 457 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 SARAFQ96BY9 339 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 SLC25A38Q96DW6 304 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 ADAD1Q96M93 576 aaKnown RBP16.39■□□□□ 0.21
CAPN3-209ENST00000466222 TCF7L1Q9HCS4 588 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 GLTPQ9NZD2 209 aa16.39■□□□□ 0.21
CAPN3-209ENST00000466222 FOXD3Q9UJU5 478 aaPredicted RBP16.39■□□□□ 0.21
CAPN3-209ENST00000466222 ELF5Q9UKW6 265 aaPredicted RBP16.39■□□□□ 0.21
CAPN3-209ENST00000466222 ACACBO00763 2458 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 ATRXP46100 2492 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 TRBV5-5A0A0J9YX44 114 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 GPR171O14626 319 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 SNAPC5O75971 98 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 ZFPL1O95159 310 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 RAF1P04049 648 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 PTGS2P35354 604 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 CSNK1A1P48729 337 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 CCR6P51684 374 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 PER3P56645 1201 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 NANOS3P60323 173 aaKnown RBP16.38■□□□□ 0.21
CAPN3-209ENST00000466222 ST3GAL2Q16842 350 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 HES5Q5TA89 166 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 OLFML2AQ68BL7 652 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 C3P1Q6ZMU1 363 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 NUFIP2Q7Z417 695 aaKnown RBP16.38■□□□□ 0.21
CAPN3-209ENST00000466222 CDC20BQ86Y33 519 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 GCNT2Q8N0V5 402 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 OR6N2Q8NGY6 317 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 OR5AK2Q8NH90 309 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 FCAMRQ8WWV6 532 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 RGP1Q92546 391 aaPredicted RBP16.38■□□□□ 0.21
CAPN3-209ENST00000466222 TMEM54Q969K7 222 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 AUNIPQ9H7T9 357 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms