RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 IGHV3-64DA0A0J9YX35 117 aa18.35■□□□□ 0.53
LIME1-203ENST00000465591 LCATP04180 440 aa18.35■□□□□ 0.53
LIME1-203ENST00000465591 SBK2P0C263 348 aa18.35■□□□□ 0.53
LIME1-203ENST00000465591 TNFRSF1AP19438 455 aa18.35■□□□□ 0.53
LIME1-203ENST00000465591 PCMT1P22061 227 aa18.35■□□□□ 0.53
LIME1-203ENST00000465591 PCK2Q16822 640 aa18.35■□□□□ 0.53
LIME1-203ENST00000465591 LINC01590Q5TEZ4 76 aa18.35■□□□□ 0.53
LIME1-203ENST00000465591 FAHD2BQ6P2I3 314 aaPredicted RBP18.35■□□□□ 0.53
LIME1-203ENST00000465591 DCXRQ7Z4W1 244 aa18.35■□□□□ 0.53
LIME1-203ENST00000465591 FAHD2AQ96GK7 314 aa18.35■□□□□ 0.53
LIME1-203ENST00000465591 MEGF10Q96KG7 1140 aa18.35■□□□□ 0.53
LIME1-203ENST00000465591 ZNF582Q96NG8 517 aaPredicted RBP18.35■□□□□ 0.53
LIME1-203ENST00000465591 GCM1Q9NP62 436 aa18.35■□□□□ 0.53
LIME1-203ENST00000465591 DDX28Q9NUL7 540 aaKnown RBP18.35■□□□□ 0.53
LIME1-203ENST00000465591 PPP1R3CQ9UQK1 317 aa18.35■□□□□ 0.53
LIME1-203ENST00000465591 FAM183AA6NL82 134 aa18.34■□□□□ 0.53
LIME1-203ENST00000465591 F5H5P2 479 aa18.34■□□□□ 0.53
LIME1-203ENST00000465591 M0R135 149 aa18.34■□□□□ 0.53
LIME1-203ENST00000465591 DNAJC8O75937 253 aaPredicted RBP18.34■□□□□ 0.53
LIME1-203ENST00000465591 HLA-DPB1P04440 258 aa18.34■□□□□ 0.53
LIME1-203ENST00000465591 SPARCP09486 303 aa18.34■□□□□ 0.53
LIME1-203ENST00000465591 SELEP16581 610 aa18.34■□□□□ 0.53
LIME1-203ENST00000465591 OTX1P32242 354 aaPredicted RBP18.34■□□□□ 0.53
LIME1-203ENST00000465591 MMP16P51512 607 aa18.34■□□□□ 0.53
LIME1-203ENST00000465591 ZMYND11Q15326 602 aa18.34■□□□□ 0.53
LIME1-203ENST00000465591 SNAI3Q3KNW1 292 aa18.34■□□□□ 0.53
LIME1-203ENST00000465591 CCDC121Q6ZUS5 278 aa18.34■□□□□ 0.53
LIME1-203ENST00000465591 OR13G1Q8NGZ3 307 aa18.34■□□□□ 0.53
LIME1-203ENST00000465591 ZNF420Q8TAQ5 688 aaPredicted RBP18.34■□□□□ 0.53
LIME1-203ENST00000465591 SLCO4A1Q96BD0 722 aa18.34■□□□□ 0.53
LIME1-203ENST00000465591 ZNF799Q96GE5 643 aa18.34■□□□□ 0.53
LIME1-203ENST00000465591 TMPRSS13Q9BYE2 586 aa18.34■□□□□ 0.53
LIME1-203ENST00000465591 CMC2Q9NRP2 79 aa18.34■□□□□ 0.53
LIME1-203ENST00000465591 PDP1Q9P0J1 537 aaPredicted RBP18.34■□□□□ 0.53
LIME1-203ENST00000465591 A0A1B0GWJ7 208 aa18.33■□□□□ 0.52
LIME1-203ENST00000465591 ARRDC5A6NEK1 342 aa18.33■□□□□ 0.52
LIME1-203ENST00000465591 SURF4O15260 269 aa18.33■□□□□ 0.52
LIME1-203ENST00000465591 PNPP00491 289 aa18.33■□□□□ 0.52
LIME1-203ENST00000465591 ANPEPP15144 967 aa18.33■□□□□ 0.52
LIME1-203ENST00000465591 ZFP36P26651 326 aaKnown RBP18.33■□□□□ 0.52
LIME1-203ENST00000465591 FMO3P31513 532 aa18.33■□□□□ 0.52
LIME1-203ENST00000465591 ENTPD1P49961 510 aa18.33■□□□□ 0.52
LIME1-203ENST00000465591 TPTEP56180 551 aa18.33■□□□□ 0.52
LIME1-203ENST00000465591 FLOT2Q14254 428 aa18.33■□□□□ 0.52
LIME1-203ENST00000465591 GK3PQ14409 553 aa18.33■□□□□ 0.52
LIME1-203ENST00000465591 PEG10Q86TG7 708 aaKnown RBP18.33■□□□□ 0.52
LIME1-203ENST00000465591 SPATA24Q86W54 205 aa18.33■□□□□ 0.52
LIME1-203ENST00000465591 OR6K6Q8NGW6 343 aa18.33■□□□□ 0.52
LIME1-203ENST00000465591 TEX47Q8TBZ9 253 aa18.33■□□□□ 0.52
LIME1-203ENST00000465591 ST7LQ8TDW4 575 aa18.33■□□□□ 0.52
LIME1-203ENST00000465591 METTL17Q9H7H0 456 aaPredicted RBP18.33■□□□□ 0.52
LIME1-203ENST00000465591 POMPQ9Y244 141 aa18.33■□□□□ 0.52
LIME1-203ENST00000465591 DOCK11Q5JSL3 2073 aa18.33■□□□□ 0.52
LIME1-203ENST00000465591 LOC105371242A0A075B767 164 aa18.32■□□□□ 0.52
LIME1-203ENST00000465591 TCRBV3S1A0A5B6 114 aa18.32■□□□□ 0.52
LIME1-203ENST00000465591 RIIAD1A6NNX1 92 aa18.32■□□□□ 0.52
LIME1-203ENST00000465591 H3BN98 237 aa18.32■□□□□ 0.52
LIME1-203ENST00000465591 TMEM178BH3BS89 294 aa18.32■□□□□ 0.52
LIME1-203ENST00000465591 ZNF593O00488 134 aaPredicted RBP18.32■□□□□ 0.52
LIME1-203ENST00000465591 PRKACGP22612 351 aa18.32■□□□□ 0.52
LIME1-203ENST00000465591 GRK5P34947 590 aa18.32■□□□□ 0.52
LIME1-203ENST00000465591 SEC61A1P61619 476 aaKnown RBP18.32■□□□□ 0.52
LIME1-203ENST00000465591 LCN2P80188 198 aa18.32■□□□□ 0.52
LIME1-203ENST00000465591 LRRC28Q86X40 367 aaPredicted RBP18.32■□□□□ 0.52
LIME1-203ENST00000465591 OR2AE1Q8NHA4 323 aa18.32■□□□□ 0.52
LIME1-203ENST00000465591 SLAMF6Q96DU3 332 aa18.32■□□□□ 0.52
LIME1-203ENST00000465591 GNGT2O14610 69 aa18.31■□□□□ 0.52
LIME1-203ENST00000465591 GSC2O15499 205 aa18.31■□□□□ 0.52
LIME1-203ENST00000465591 FKBP6O75344 327 aa18.31■□□□□ 0.52
LIME1-203ENST00000465591 ZNF205O95201 554 aa18.31■□□□□ 0.52
LIME1-203ENST00000465591 IFNGP01579 166 aa18.31■□□□□ 0.52
LIME1-203ENST00000465591 SLC2A1P11166 492 aa18.31■□□□□ 0.52
LIME1-203ENST00000465591 ZNF3P17036 446 aa18.31■□□□□ 0.52
LIME1-203ENST00000465591 PMELP40967 661 aa18.31■□□□□ 0.52
LIME1-203ENST00000465591 SLC6A9P48067 706 aa18.31■□□□□ 0.52
LIME1-203ENST00000465591 PRKXP51817 358 aa18.31■□□□□ 0.52
LIME1-203ENST00000465591 BTG1P62324 171 aa18.31■□□□□ 0.52
LIME1-203ENST00000465591 ZNF92Q03936 586 aa18.31■□□□□ 0.52
LIME1-203ENST00000465591 TEX30Q5JUR7 227 aa18.31■□□□□ 0.52
LIME1-203ENST00000465591 SLC27A4Q6P1M0 643 aa18.31■□□□□ 0.52
LIME1-203ENST00000465591 SPATC1Q76KD6 591 aa18.31■□□□□ 0.52
LIME1-203ENST00000465591 SPTSSAQ969W0 71 aa18.31■□□□□ 0.52
LIME1-203ENST00000465591 COPS4Q9BT78 406 aa18.31■□□□□ 0.52
LIME1-203ENST00000465591 CADM1Q9BY67 442 aaKnown RBP18.31■□□□□ 0.52
LIME1-203ENST00000465591 CENPMQ9NSP4 180 aa18.31■□□□□ 0.52
LIME1-203ENST00000465591 TMEM100Q9NV29 134 aa18.31■□□□□ 0.52
LIME1-203ENST00000465591 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.31■□□□□ 0.52
LIME1-203ENST00000465591 CYB5R3P00387 301 aaPredicted RBP18.3■□□□□ 0.52
LIME1-203ENST00000465591 POU1F1P28069 291 aa18.3■□□□□ 0.52
LIME1-203ENST00000465591 MALLQ13021 153 aa18.3■□□□□ 0.52
LIME1-203ENST00000465591 MAB21L1Q13394 359 aa18.3■□□□□ 0.52
LIME1-203ENST00000465591 GINS1Q14691 196 aa18.3■□□□□ 0.52
LIME1-203ENST00000465591 TMEM155Q4W5P6 130 aa18.3■□□□□ 0.52
LIME1-203ENST00000465591 GLYATL3Q5SZD4 288 aa18.3■□□□□ 0.52
LIME1-203ENST00000465591 PGAP1Q75T13 922 aa18.3■□□□□ 0.52
LIME1-203ENST00000465591 MOGAT3Q86VF5 341 aa18.3■□□□□ 0.52
LIME1-203ENST00000465591 RFLNBQ8N5W9 214 aa18.3■□□□□ 0.52
LIME1-203ENST00000465591 PAPD5Q8NDF8 572 aaKnown RBP18.3■□□□□ 0.52
LIME1-203ENST00000465591 C19orf24Q9BVV8 132 aa18.3■□□□□ 0.52
LIME1-203ENST00000465591 PATZ1Q9HBE1 687 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms