RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 GORASP2Q9H8Y8 452 aa12.12□□□□□ -0.47
ALMS1-202ENST00000464408 KRCC1Q9NPI7 259 aaPredicted RBP12.12□□□□□ -0.47
ALMS1-202ENST00000464408 CYB5R1Q9UHQ9 305 aa12.12□□□□□ -0.47
ALMS1-202ENST00000464408 IGHV2-70DA0A0C4DH43 119 aa12.11□□□□□ -0.47
ALMS1-202ENST00000464408 ARPC2O15144 300 aa12.11□□□□□ -0.47
ALMS1-202ENST00000464408 ARPC3O15145 178 aa12.11□□□□□ -0.47
ALMS1-202ENST00000464408 LCATP04180 440 aa12.11□□□□□ -0.47
ALMS1-202ENST00000464408 PRDX6P30041 224 aa12.11□□□□□ -0.47
ALMS1-202ENST00000464408 RRM2P31350 389 aa12.11□□□□□ -0.47
ALMS1-202ENST00000464408 PYCR1P32322 319 aa12.11□□□□□ -0.47
ALMS1-202ENST00000464408 GSSP48637 474 aa12.11□□□□□ -0.47
ALMS1-202ENST00000464408 ZNF404Q494X3 552 aa12.11□□□□□ -0.47
ALMS1-202ENST00000464408 CLEC12AQ5QGZ9 265 aa12.11□□□□□ -0.47
ALMS1-202ENST00000464408 PGM2L1Q6PCE3 622 aa12.11□□□□□ -0.47
ALMS1-202ENST00000464408 ZNF620Q6ZNG0 422 aa12.11□□□□□ -0.47
ALMS1-202ENST00000464408 CYB561A3Q8NBI2 242 aa12.11□□□□□ -0.47
ALMS1-202ENST00000464408 OR52E2Q8NGJ4 325 aa12.11□□□□□ -0.47
ALMS1-202ENST00000464408 SLCO4A1Q96BD0 722 aa12.11□□□□□ -0.47
ALMS1-202ENST00000464408 ATF6BQ99941 703 aa12.11□□□□□ -0.47
ALMS1-202ENST00000464408 CDADC1Q9BWV3 514 aa12.11□□□□□ -0.47
ALMS1-202ENST00000464408 EGLN3Q9H6Z9 239 aa12.11□□□□□ -0.47
ALMS1-202ENST00000464408 UFSP2Q9NUQ7 469 aa12.11□□□□□ -0.47
ALMS1-202ENST00000464408 TMEM100Q9NV29 134 aa12.11□□□□□ -0.47
ALMS1-202ENST00000464408 TRAV40A0A0B4J280 105 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 TVP23AA6NH52 213 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 IFNL4K9M1U5 179 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 TMPRSS2O15393 492 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 FAM20BO75063 409 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 HLA-DQA2P01906 255 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 HSD17B1P14061 328 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 RAD23AP54725 363 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 GNB2P62879 340 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.1□□□□□ -0.47
ALMS1-202ENST00000464408 SLC9A3R2Q15599 337 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 MPPED2Q15777 294 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 ZNF181Q2M3W8 571 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 SNAI3Q3KNW1 292 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 PGBD2Q6P3X8 592 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 OR9Q2Q8NGE9 314 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 SGMS2Q8NHU3 365 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 RAB40AQ8WXH6 277 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 UPRTQ96BW1 309 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 NEIL1Q96FI4 390 aaPredicted RBP12.1□□□□□ -0.47
ALMS1-202ENST00000464408 ZNF747Q9BV97 191 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 HCAR1Q9BXC0 346 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 MS4A7Q9GZW8 240 aaPredicted RBP12.1□□□□□ -0.47
ALMS1-202ENST00000464408 MED4Q9NPJ6 270 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 MIOXQ9UGB7 285 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 CD300AQ9UGN4 299 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 MAGEL2Q9UJ55 1249 aa12.1□□□□□ -0.47
ALMS1-202ENST00000464408 LRRC30A6NM36 301 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 C22orf46C9J442 243 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 GMNNO75496 209 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 PLATP00750 562 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 FABP3P05413 133 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 RNASE1P07998 156 aaKnown RBP12.09□□□□□ -0.47
ALMS1-202ENST00000464408 CA6P23280 308 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 NOS3P29474 1203 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 GATA4P43694 442 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 PITPNBP48739 271 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 SMIM11AP58511 58 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 BTNL3Q6UXE8 466 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 ZNF841Q6ZN19 808 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 OR8B3Q8NGG8 313 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 OR51L1Q8NGJ5 315 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 OR8D4Q8NGM9 314 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 OR2AJ1Q8NGZ0 328 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 OR2AE1Q8NHA4 323 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 NSMCE2Q96MF7 247 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 OR8B2Q96RD0 313 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 CDRT15Q96T59 188 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 DDOQ99489 341 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 ARL8BQ9NVJ2 186 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 CTSZQ9UBR2 303 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 TMCC3Q9ULS5 477 aa12.09□□□□□ -0.47
ALMS1-202ENST00000464408 M0R135 149 aa12.08□□□□□ -0.48
ALMS1-202ENST00000464408 BHLHE40O14503 412 aa12.08□□□□□ -0.48
ALMS1-202ENST00000464408 KCNAB3O43448 404 aa12.08□□□□□ -0.48
ALMS1-202ENST00000464408 SNX3O60493 162 aa12.08□□□□□ -0.48
ALMS1-202ENST00000464408 CD200P41217 278 aa12.08□□□□□ -0.48
ALMS1-202ENST00000464408 ZNF92Q03936 586 aa12.08□□□□□ -0.48
ALMS1-202ENST00000464408 FOXL1Q12952 345 aa12.08□□□□□ -0.48
ALMS1-202ENST00000464408 PPP1R8Q12972 351 aaKnown RBP12.08□□□□□ -0.48
ALMS1-202ENST00000464408 TSPAN31Q12999 210 aa12.08□□□□□ -0.48
ALMS1-202ENST00000464408 SLC36A3Q495N2 470 aa12.08□□□□□ -0.48
ALMS1-202ENST00000464408 GLYATL3Q5SZD4 288 aa12.08□□□□□ -0.48
ALMS1-202ENST00000464408 ZNF362Q5T0B9 420 aaPredicted RBP12.08□□□□□ -0.48
ALMS1-202ENST00000464408 WDR25Q64LD2 544 aaPredicted RBP12.08□□□□□ -0.48
ALMS1-202ENST00000464408 LRRN1Q6UXK5 716 aa12.08□□□□□ -0.48
ALMS1-202ENST00000464408 BRD3OSQ6XYD6 125 aa12.08□□□□□ -0.48
ALMS1-202ENST00000464408 C9orf139Q6ZV77 190 aa12.08□□□□□ -0.48
ALMS1-202ENST00000464408 PGAP1Q75T13 922 aa12.08□□□□□ -0.48
ALMS1-202ENST00000464408 PGAM4Q8N0Y7 254 aa12.08□□□□□ -0.48
ALMS1-202ENST00000464408 FITM2Q8N6M3 262 aa12.08□□□□□ -0.48
ALMS1-202ENST00000464408 BOLLQ8N9W6 283 aaKnown RBP12.08□□□□□ -0.48
ALMS1-202ENST00000464408 OR9Q1Q8NGQ5 310 aa12.08□□□□□ -0.48
ALMS1-202ENST00000464408 Q8TCH9 128 aa12.08□□□□□ -0.48
ALMS1-202ENST00000464408 GNPDA2Q8TDQ7 276 aa12.08□□□□□ -0.48
ALMS1-202ENST00000464408 SPRYD4Q8WW59 207 aaPredicted RBP12.08□□□□□ -0.48
ALMS1-202ENST00000464408 MCUR1Q96AQ8 359 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms