RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 ZNF319Q9P2F9 582 aa16.6■□□□□ 0.25
CCDC78-206ENST00000463539 ATPIF1Q9UII2 106 aa16.6■□□□□ 0.25
CCDC78-206ENST00000463539 PROCRQ9UNN8 238 aa16.6■□□□□ 0.25
CCDC78-206ENST00000463539 TRAV8-7A0A075B6U6 113 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 ANKRD61A6NGH8 418 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 TOXO94900 526 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 IL2RAP01589 272 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 TIMP3P35625 211 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 ARR3P36575 388 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 GFOD2Q3B7J2 385 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 KRTAP27-1Q3LI81 207 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 CEP78Q5JTW2 689 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 DDI2Q5TDH0 399 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 STAC2Q6ZMT1 411 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 C3P1Q6ZMU1 363 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 BTLAQ7Z6A9 289 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 NAA40Q86UY6 237 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 RPRMLQ8N4K4 120 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 ZNF433Q8N7K0 673 aaPredicted RBP16.59■□□□□ 0.25
CCDC78-206ENST00000463539 NANOS1Q8WY41 292 aaKnown RBP16.59■□□□□ 0.25
CCDC78-206ENST00000463539 BCL2L2Q92843 193 aaPredicted RBP16.59■□□□□ 0.25
CCDC78-206ENST00000463539 CEP19Q96LK0 163 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 ZFP3Q96NJ6 502 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 WDR12Q9GZL7 423 aaKnown RBP16.59■□□□□ 0.25
CCDC78-206ENST00000463539 TP63Q9H3D4 680 aaPredicted RBP16.59■□□□□ 0.25
CCDC78-206ENST00000463539 GPR84Q9NQS5 396 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 PLSCR4Q9NRQ2 329 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 DAPK2Q9UIK4 370 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 SVILO95425 2214 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 ZNF503-AS2A6NEH8 195 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 UBL3O95164 117 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 IGHV1-2P23083 117 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 ANOS1P23352 680 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 ZNF846Q147U1 533 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 SLC25A35Q3KQZ1 300 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 TMEM53Q6P2H8 277 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 MFSD4AQ8N468 514 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 ACOT12Q8WYK0 555 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 KCTD12Q96CX2 325 aaKnown RBP16.59■□□□□ 0.25
CCDC78-206ENST00000463539 STARD4Q96DR4 205 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 COMMD3Q9UBI1 195 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 CMAHPQ9Y471 501 aa16.59■□□□□ 0.25
CCDC78-206ENST00000463539 A0A1B0GTI1 187 aa16.58■□□□□ 0.24
CCDC78-206ENST00000463539 TBX1O43435 398 aa16.58■□□□□ 0.24
CCDC78-206ENST00000463539 SLC19A2O60779 497 aa16.58■□□□□ 0.24
CCDC78-206ENST00000463539 EPXP11678 715 aa16.58■□□□□ 0.24
CCDC78-206ENST00000463539 RAB1AP62820 205 aa16.58■□□□□ 0.24
CCDC78-206ENST00000463539 DYNC1I2Q13409 638 aaKnown RBP16.58■□□□□ 0.24
CCDC78-206ENST00000463539 TBRG1Q3YBR2 411 aa16.58■□□□□ 0.24
CCDC78-206ENST00000463539 MZT2AQ6P582 158 aa16.58■□□□□ 0.24
CCDC78-206ENST00000463539 LRRTM1Q86UE6 522 aa16.58■□□□□ 0.24
CCDC78-206ENST00000463539 LAX1Q8IWV1 398 aa16.58■□□□□ 0.24
CCDC78-206ENST00000463539 KDF1Q8NAX2 398 aaPredicted RBP16.58■□□□□ 0.24
CCDC78-206ENST00000463539 CPEB3Q8NE35 698 aaKnown RBP16.58■□□□□ 0.24
CCDC78-206ENST00000463539 OR52H1Q8NGJ2 320 aa16.58■□□□□ 0.24
CCDC78-206ENST00000463539 ABCB9Q9NP78 766 aa16.58■□□□□ 0.24
CCDC78-206ENST00000463539 ZNF275Q9NSD4 429 aaPredicted RBP16.58■□□□□ 0.24
CCDC78-206ENST00000463539 MED12LQ86YW9 2145 aa16.57■□□□□ 0.24
CCDC78-206ENST00000463539 FREM1Q5H8C1 2179 aa16.57■□□□□ 0.24
CCDC78-206ENST00000463539 SPTA1P02549 2419 aa16.57■□□□□ 0.24
CCDC78-206ENST00000463539 A0A0U1RQV5 110 aa16.57■□□□□ 0.24
CCDC78-206ENST00000463539 RAD51DO75771 328 aa16.57■□□□□ 0.24
CCDC78-206ENST00000463539 LYZL6O75951 148 aa16.57■□□□□ 0.24
CCDC78-206ENST00000463539 MAS1P04201 325 aa16.57■□□□□ 0.24
CCDC78-206ENST00000463539 FSTP19883 344 aa16.57■□□□□ 0.24
CCDC78-206ENST00000463539 CCL1P22362 96 aa16.57■□□□□ 0.24
CCDC78-206ENST00000463539 HGFACQ04756 655 aa16.57■□□□□ 0.24
CCDC78-206ENST00000463539 DCTN2Q13561 401 aaKnown RBP16.57■□□□□ 0.24
CCDC78-206ENST00000463539 DOK3Q7L591 496 aa16.57■□□□□ 0.24
CCDC78-206ENST00000463539 NAXEQ8NCW5 288 aa16.57■□□□□ 0.24
CCDC78-206ENST00000463539 FAM71F1Q96KD3 344 aaPredicted RBP16.57■□□□□ 0.24
CCDC78-206ENST00000463539 OR10A2Q9H208 303 aa16.57■□□□□ 0.24
CCDC78-206ENST00000463539 SP140LQ9H930 580 aa16.57■□□□□ 0.24
CCDC78-206ENST00000463539 NOX3Q9HBY0 568 aa16.57■□□□□ 0.24
CCDC78-206ENST00000463539 NCOA6Q14686 2063 aaPredicted RBP16.57■□□□□ 0.24
CCDC78-206ENST00000463539 CIB4A0PJX0 185 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 C5orf63A6NC05 138 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 ANXA2P2A6NMY6 339 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 E9PLN8 166 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 LMX1BO60663 402 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 CGAP01215 116 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 SLC2A2P11168 524 aaPredicted RBP16.56■□□□□ 0.24
CCDC78-206ENST00000463539 ADRA2CP18825 462 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 COX5AP20674 150 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 RBPJQ06330 500 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 GSG1Q2KHT4 349 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 SPANXN2Q5MJ10 180 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 ASPHD2Q6ICH7 369 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 DOLPP1Q86YN1 238 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 GFI1Q99684 422 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 SLC30A2Q9BRI3 323 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 ZCCHC4Q9H5U6 513 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 PLGRKTQ9HBL7 147 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 TAS2R4Q9NYW5 299 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 FOXJ3Q9UPW0 622 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 V9GY05 133 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 TTLL8A6PVC2 850 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 COX5BP10606 129 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 ATF1P18846 271 aa16.56■□□□□ 0.24
CCDC78-206ENST00000463539 APEX1P27695 318 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms