RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 PCDH15Q96QU1 1955 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 A0A0A6YYC8 382 aaPredicted RBP7.8□□□□□ -1.16
SHQ1-203ENST00000463369 A0A1W2PN81 502 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 RIIAD1A6NNX1 92 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 IDSB3KWA1 339 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 BLOC1S5-TXNDC5H3BN57 136 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 I3L1I5 382 aaPredicted RBP7.8□□□□□ -1.16
SHQ1-203ENST00000463369 BCAT2O15382 392 aaPredicted RBP7.8□□□□□ -1.16
SHQ1-203ENST00000463369 SLC31A2O15432 143 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 TMPRSS11DO60235 418 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 TNFP01375 233 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 CD3DP04234 171 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 GYPBP06028 91 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 SFTA3P0C7M3 94 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 SP9P0CG40 484 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 HLA-GP17693 338 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 CD34P28906 385 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 CHRNA7P36544 502 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 MAGEB1P43366 347 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 TAS2R60P59551 318 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 CRMP1Q14194 572 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 ELAVL1Q15717 326 aaKnown RBP7.8□□□□□ -1.16
SHQ1-203ENST00000463369 SGCBQ16585 318 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 OR10K2Q6IF99 312 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 STEAP1BQ6NZ63 245 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 LCTLQ6UWM7 567 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 TMEM64Q6YI46 380 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 STAC2Q6ZMT1 411 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 RD3Q7Z3Z2 195 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 PAQR4Q8N4S7 273 aaPredicted RBP7.8□□□□□ -1.16
SHQ1-203ENST00000463369 ARRDC1Q8N5I2 433 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 CYB561A3Q8NBI2 242 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 OR4K14Q8NGD5 310 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 OR10R2Q8NGX6 335 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 RNASE8Q8TDE3 154 aaKnown RBP7.8□□□□□ -1.16
SHQ1-203ENST00000463369 SNX33Q8WV41 574 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 CPNE4Q96A23 557 aaPredicted RBP7.8□□□□□ -1.16
SHQ1-203ENST00000463369 SLAMF9Q96A28 289 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 PRSS27Q9BQR3 290 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 SLC25A21Q9BQT8 299 aaPredicted RBP7.8□□□□□ -1.16
SHQ1-203ENST00000463369 TPPP3Q9BW30 176 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 FKRPQ9H9S5 495 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 GNG8Q9UK08 70 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 LIPGQ9Y5X9 500 aa7.8□□□□□ -1.16
SHQ1-203ENST00000463369 VPS13AQ96RL7 3174 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 CPED1A4D0V7 1026 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 AHRRA9YTQ3 701 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 TERTO14746 1132 aaKnown RBP7.79□□□□□ -1.16
SHQ1-203ENST00000463369 OIP5O43482 229 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 IFNGP01579 166 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 CD14P08571 375 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 ACKR3P25106 362 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 ITGA3P26006 1051 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 RBM34P42696 430 aaKnown RBP7.79□□□□□ -1.16
SHQ1-203ENST00000463369 RAB5CP51148 216 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 BLKP51451 505 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 NCBP2P52298 156 aaKnown RBP eCLIP7.79□□□□□ -1.16
SHQ1-203ENST00000463369 LTBQ06643 244 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 PLA2G7Q13093 441 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 AIMP2Q13155 320 aaKnown RBP7.79□□□□□ -1.16
SHQ1-203ENST00000463369 DHRS2Q13268 280 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 ALKBH1Q13686 389 aaKnown RBP7.79□□□□□ -1.16
SHQ1-203ENST00000463369 TESK1Q15569 626 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 OR7A5Q15622 319 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 LYSMD4Q5XG99 296 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 ETV3LQ6ZN32 361 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 TMED4Q7Z7H5 227 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 MRPL41Q8IXM3 137 aaKnown RBP7.79□□□□□ -1.16
SHQ1-203ENST00000463369 CLEC1AQ8NC01 280 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 OR4C6Q8NH72 309 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 SFXN5Q8TD22 340 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 NUDCD2Q8WVJ2 157 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 BCL2L2Q92843 193 aaPredicted RBP7.79□□□□□ -1.16
SHQ1-203ENST00000463369 DVL3Q92997 716 aaPredicted RBP7.79□□□□□ -1.16
SHQ1-203ENST00000463369 MS4A8Q9BY19 250 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 METTL7AQ9H8H3 244 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 LHX9Q9NQ69 397 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 C20orf141Q9NUB4 165 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 GFOD1Q9NXC2 390 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 ICAM5Q9UMF0 924 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 KCNK6Q9Y257 313 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 TIMM10BQ9Y5J6 103 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 B3GALT1Q9Y5Z6 326 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 GOLGA4Q13439 2230 aaKnown RBP7.79□□□□□ -1.16
SHQ1-203ENST00000463369 TEX13DA0A0J9YY54 714 aaPredicted RBP7.79□□□□□ -1.16
SHQ1-203ENST00000463369 CD5P06127 495 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 CD2P06729 351 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 ADRA2CP18825 462 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 RAB5AP20339 215 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 PTGER1P34995 402 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 POU3F4P49335 361 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 PRKXP51817 358 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 SOX8P57073 446 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 SSBP1Q04837 148 aaKnown RBP7.79□□□□□ -1.16
SHQ1-203ENST00000463369 NKPD1Q17RQ9 610 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 PNLIPRP3Q17RR3 467 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 SPATA46Q5T0L3 261 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 ANKRD16Q6P6B7 361 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 NRROSQ86YC3 692 aa7.79□□□□□ -1.16
SHQ1-203ENST00000463369 OR2L13Q8N349 312 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms