RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 LINC00471Q8N535 108 aa16.56■□□□□ 0.24
VARS-221ENST00000463184 OR8G5Q8NG78 346 aa16.56■□□□□ 0.24
VARS-221ENST00000463184 OR4C15Q8NGM1 316 aa16.56■□□□□ 0.24
VARS-221ENST00000463184 OR13C2Q8NGS9 318 aa16.56■□□□□ 0.24
VARS-221ENST00000463184 SLC7A6Q92536 515 aa16.56■□□□□ 0.24
VARS-221ENST00000463184 TMIGD2Q96BF3 282 aa16.56■□□□□ 0.24
VARS-221ENST00000463184 RASD2Q96D21 266 aa16.56■□□□□ 0.24
VARS-221ENST00000463184 DUS3LQ96G46 650 aaKnown RBP16.56■□□□□ 0.24
VARS-221ENST00000463184 ADAM18Q9Y3Q7 739 aa16.56■□□□□ 0.24
VARS-221ENST00000463184 MMP24Q9Y5R2 645 aa16.56■□□□□ 0.24
VARS-221ENST00000463184 PRSS37A4D1T9 235 aa16.55■□□□□ 0.24
VARS-221ENST00000463184 OR6C6A6NF89 314 aa16.55■□□□□ 0.24
VARS-221ENST00000463184 OR10H3O60404 316 aa16.55■□□□□ 0.24
VARS-221ENST00000463184 MDKP21741 143 aaPredicted RBP16.55■□□□□ 0.24
VARS-221ENST00000463184 OMPP47874 163 aa16.55■□□□□ 0.24
VARS-221ENST00000463184 SRP9P49458 86 aaKnown RBP16.55■□□□□ 0.24
VARS-221ENST00000463184 ACTR3P61158 418 aa16.55■□□□□ 0.24
VARS-221ENST00000463184 ZNF181Q2M3W8 571 aa16.55■□□□□ 0.24
VARS-221ENST00000463184 MESTQ5EB52 335 aa16.55■□□□□ 0.24
VARS-221ENST00000463184 FBXW12Q6X9E4 464 aa16.55■□□□□ 0.24
VARS-221ENST00000463184 OR1F12Q8NHA8 337 aa16.55■□□□□ 0.24
VARS-221ENST00000463184 ZNF420Q8TAQ5 688 aaPredicted RBP16.55■□□□□ 0.24
VARS-221ENST00000463184 FAM46AQ96IP4 442 aaKnown RBP16.55■□□□□ 0.24
VARS-221ENST00000463184 MEGF10Q96KG7 1140 aa16.55■□□□□ 0.24
VARS-221ENST00000463184 Q96M85 177 aa16.55■□□□□ 0.24
VARS-221ENST00000463184 ZNF582Q96NG8 517 aaPredicted RBP16.55■□□□□ 0.24
VARS-221ENST00000463184 NDEL1Q9GZM8 345 aa16.55■□□□□ 0.24
VARS-221ENST00000463184 ATPIF1Q9UII2 106 aa16.55■□□□□ 0.24
VARS-221ENST00000463184 SAMHD1Q9Y3Z3 626 aaKnown RBP16.55■□□□□ 0.24
VARS-221ENST00000463184 SOX21Q9Y651 276 aaPredicted RBP16.55■□□□□ 0.24
VARS-221ENST00000463184 KIR2DS1A0A191URI9 304 aa16.54■□□□□ 0.24
VARS-221ENST00000463184 A0A1B0GUS0 222 aa16.54■□□□□ 0.24
VARS-221ENST00000463184 GNGT2O14610 69 aa16.54■□□□□ 0.24
VARS-221ENST00000463184 CYB5R3P00387 301 aaPredicted RBP16.54■□□□□ 0.24
VARS-221ENST00000463184 CTLA4P16410 223 aa16.54■□□□□ 0.24
VARS-221ENST00000463184 GPR4P46093 362 aa16.54■□□□□ 0.24
VARS-221ENST00000463184 HLXQ14774 488 aaPredicted RBP16.54■□□□□ 0.24
VARS-221ENST00000463184 OCLNQ16625 522 aa16.54■□□□□ 0.24
VARS-221ENST00000463184 ZBED5Q49AG3 693 aa16.54■□□□□ 0.24
VARS-221ENST00000463184 CCDC92Q53HC0 331 aaPredicted RBP16.54■□□□□ 0.24
VARS-221ENST00000463184 FAM122BQ7Z309 247 aa16.54■□□□□ 0.24
VARS-221ENST00000463184 JAZF1Q86VZ6 243 aa16.54■□□□□ 0.24
VARS-221ENST00000463184 OR10AD1Q8NGE0 317 aa16.54■□□□□ 0.24
VARS-221ENST00000463184 TAF15Q92804 592 aaKnown RBP eCLIP16.54■□□□□ 0.24
VARS-221ENST00000463184 DACT3Q96B18 629 aaPredicted RBP16.54■□□□□ 0.24
VARS-221ENST00000463184 NEIL1Q96FI4 390 aaPredicted RBP16.54■□□□□ 0.24
VARS-221ENST00000463184 ZNF570Q96NI8 536 aa16.54■□□□□ 0.24
VARS-221ENST00000463184 TMEM246Q9BRR3 403 aa16.54■□□□□ 0.24
VARS-221ENST00000463184 ARMC1Q9NVT9 282 aa16.54■□□□□ 0.24
VARS-221ENST00000463184 VNN3Q9NY84 501 aa16.54■□□□□ 0.24
VARS-221ENST00000463184 ASH2LQ9UBL3 628 aa16.54■□□□□ 0.24
VARS-221ENST00000463184 DNAJB9Q9UBS3 223 aa16.54■□□□□ 0.24
VARS-221ENST00000463184 AP4S1Q9Y587 144 aa16.54■□□□□ 0.24
VARS-221ENST00000463184 TRAV40A0A0B4J280 105 aa16.53■□□□□ 0.24
VARS-221ENST00000463184 LRRC30A6NM36 301 aa16.53■□□□□ 0.24
VARS-221ENST00000463184 CDC42EP2O14613 210 aa16.53■□□□□ 0.24
VARS-221ENST00000463184 KHDRBS3O75525 346 aaKnown RBP16.53■□□□□ 0.24
VARS-221ENST00000463184 CCNB2O95067 398 aa16.53■□□□□ 0.24
VARS-221ENST00000463184 ZNF205O95201 554 aa16.53■□□□□ 0.24
VARS-221ENST00000463184 BPIFB3P59826 476 aa16.53■□□□□ 0.24
VARS-221ENST00000463184 KPNB1Q14974 876 aaKnown RBP16.53■□□□□ 0.24
VARS-221ENST00000463184 OR2T2Q6IF00 324 aa16.53■□□□□ 0.24
VARS-221ENST00000463184 SPATC1Q76KD6 591 aa16.53■□□□□ 0.24
VARS-221ENST00000463184 NLRC3Q7RTR2 1065 aa16.53■□□□□ 0.24
VARS-221ENST00000463184 GLB1L2Q8IW92 636 aa16.53■□□□□ 0.24
VARS-221ENST00000463184 C10orf67Q8IYJ2 551 aa16.53■□□□□ 0.24
VARS-221ENST00000463184 C1orf87Q8N0U7 546 aa16.53■□□□□ 0.24
VARS-221ENST00000463184 OR8B3Q8NGG8 313 aa16.53■□□□□ 0.24
VARS-221ENST00000463184 APOBEC3DQ96AK3 386 aaPredicted RBP16.53■□□□□ 0.24
VARS-221ENST00000463184 OR8B2Q96RD0 313 aa16.53■□□□□ 0.24
VARS-221ENST00000463184 PRDM13Q9H4Q3 707 aa16.53■□□□□ 0.24
VARS-221ENST00000463184 PTTG3PQ9NZH4 202 aa16.53■□□□□ 0.24
VARS-221ENST00000463184 COA3Q9Y2R0 106 aaPredicted RBP16.53■□□□□ 0.24
VARS-221ENST00000463184 U3KQV3 271 aa16.53■□□□□ 0.24
VARS-221ENST00000463184 DOCK11Q5JSL3 2073 aa16.53■□□□□ 0.24
VARS-221ENST00000463184 HOXA3O43365 443 aaPredicted RBP16.52■□□□□ 0.24
VARS-221ENST00000463184 SLC16A7O60669 478 aa16.52■□□□□ 0.24
VARS-221ENST00000463184 DBHP09172 617 aa16.52■□□□□ 0.24
VARS-221ENST00000463184 ZNF26P17031 533 aaPredicted RBP16.52■□□□□ 0.24
VARS-221ENST00000463184 PPP1R8Q12972 351 aaKnown RBP16.52■□□□□ 0.24
VARS-221ENST00000463184 MICAQ29983 383 aa16.52■□□□□ 0.24
VARS-221ENST00000463184 ZNF404Q494X3 552 aa16.52■□□□□ 0.24
VARS-221ENST00000463184 ZNF362Q5T0B9 420 aaPredicted RBP16.52■□□□□ 0.24
VARS-221ENST00000463184 MOGAT3Q86VF5 341 aa16.52■□□□□ 0.24
VARS-221ENST00000463184 OR10S1Q8NGN2 331 aa16.52■□□□□ 0.24
VARS-221ENST00000463184 GNPDA2Q8TDQ7 276 aa16.52■□□□□ 0.24
VARS-221ENST00000463184 ZDHHC16Q969W1 377 aa16.52■□□□□ 0.24
VARS-221ENST00000463184 SLC30A2Q9BRI3 323 aa16.52■□□□□ 0.24
VARS-221ENST00000463184 NUDT16L1Q9BRJ7 211 aaKnown RBP16.52■□□□□ 0.24
VARS-221ENST00000463184 UNC119BA6NIH7 251 aa16.51■□□□□ 0.23
VARS-221ENST00000463184 IQCF6A8MYZ5 107 aa16.51■□□□□ 0.23
VARS-221ENST00000463184 SRRM5B3KS81 715 aa16.51■□□□□ 0.23
VARS-221ENST00000463184 H0YL77 283 aa16.51■□□□□ 0.23
VARS-221ENST00000463184 RER1O15258 196 aa16.51■□□□□ 0.23
VARS-221ENST00000463184 PTP4A3O75365 173 aa16.51■□□□□ 0.23
VARS-221ENST00000463184 TIPRLO75663 272 aa16.51■□□□□ 0.23
VARS-221ENST00000463184 OMGP23515 440 aa16.51■□□□□ 0.23
VARS-221ENST00000463184 FPR3P25089 353 aa16.51■□□□□ 0.23
VARS-221ENST00000463184 SDHAP31040 664 aa16.51■□□□□ 0.23
VARS-221ENST00000463184 PITPNBP48739 271 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms