RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 RGS9O75916 674 aaPredicted RBP15.92■□□□□ 0.14
VARS-220ENST00000461874 FSHBP01225 129 aa15.92■□□□□ 0.14
VARS-220ENST00000461874 T-ENOLP0DO92 83 aa15.92■□□□□ 0.14
VARS-220ENST00000461874 CALB2P22676 271 aa15.92■□□□□ 0.14
VARS-220ENST00000461874 TPTEP56180 551 aa15.92■□□□□ 0.14
VARS-220ENST00000461874 HILS1P60008 231 aa15.92■□□□□ 0.14
VARS-220ENST00000461874 MALLQ13021 153 aa15.92■□□□□ 0.14
VARS-220ENST00000461874 MICAQ29983 383 aa15.92■□□□□ 0.14
VARS-220ENST00000461874 OR2T5Q6IEZ7 315 aa15.92■□□□□ 0.14
VARS-220ENST00000461874 MUC20Q8N307 709 aaPredicted RBP15.92■□□□□ 0.14
VARS-220ENST00000461874 SLC37A3Q8NCC5 494 aa15.92■□□□□ 0.14
VARS-220ENST00000461874 OR10S1Q8NGN2 331 aa15.92■□□□□ 0.14
VARS-220ENST00000461874 OR2T29Q8NH02 315 aa15.92■□□□□ 0.14
VARS-220ENST00000461874 ZNF420Q8TAQ5 688 aaPredicted RBP15.92■□□□□ 0.14
VARS-220ENST00000461874 RBM4Q9BWF3 364 aaKnown RBP15.92■□□□□ 0.14
VARS-220ENST00000461874 TSSK6Q9BXA6 273 aa15.92■□□□□ 0.14
VARS-220ENST00000461874 DGCR6LQ9BY27 220 aa15.92■□□□□ 0.14
VARS-220ENST00000461874 MMP26Q9NRE1 261 aa15.92■□□□□ 0.14
VARS-220ENST00000461874 TBC1D23Q9NUY8 699 aa15.92■□□□□ 0.14
VARS-220ENST00000461874 VNN3Q9NY84 501 aa15.92■□□□□ 0.14
VARS-220ENST00000461874 TRAPPC2LH3BP13 241 aa15.91■□□□□ 0.14
VARS-220ENST00000461874 M0R135 149 aa15.91■□□□□ 0.14
VARS-220ENST00000461874 FAM107AO95990 144 aa15.91■□□□□ 0.14
VARS-220ENST00000461874 RPS27P42677 84 aaKnown RBP15.91■□□□□ 0.14
VARS-220ENST00000461874 PRSS12P56730 875 aa15.91■□□□□ 0.14
VARS-220ENST00000461874 SEC61A1P61619 476 aaKnown RBP15.91■□□□□ 0.14
VARS-220ENST00000461874 ZNF181Q2M3W8 571 aa15.91■□□□□ 0.14
VARS-220ENST00000461874 FAM98BQ52LJ0 330 aaKnown RBP15.91■□□□□ 0.14
VARS-220ENST00000461874 LYPD4Q6UWN0 246 aa15.91■□□□□ 0.14
VARS-220ENST00000461874 CCDC197Q8NCU1 140 aa15.91■□□□□ 0.14
VARS-220ENST00000461874 DEFB108BQ8NET1 73 aa15.91■□□□□ 0.14
VARS-220ENST00000461874 OR51L1Q8NGJ5 315 aa15.91■□□□□ 0.14
VARS-220ENST00000461874 POP5Q969H6 163 aaKnown RBP15.91■□□□□ 0.14
VARS-220ENST00000461874 SPTSSAQ969W0 71 aa15.91■□□□□ 0.14
VARS-220ENST00000461874 SLCO4A1Q96BD0 722 aa15.91■□□□□ 0.14
VARS-220ENST00000461874 ZNF799Q96GE5 643 aa15.91■□□□□ 0.14
VARS-220ENST00000461874 REEP1Q9H902 201 aa15.91■□□□□ 0.14
VARS-220ENST00000461874 DDX28Q9NUL7 540 aaKnown RBP15.91■□□□□ 0.14
VARS-220ENST00000461874 BAIAP2Q9UQB8 552 aa15.91■□□□□ 0.14
VARS-220ENST00000461874 SAMHD1Q9Y3Z3 626 aaKnown RBP15.91■□□□□ 0.14
VARS-220ENST00000461874 U3KQV3 271 aa15.91■□□□□ 0.14
VARS-220ENST00000461874 IGHV3-64DA0A0J9YX35 117 aa15.9■□□□□ 0.14
VARS-220ENST00000461874 CEACAM18A8MTB9 384 aa15.9■□□□□ 0.14
VARS-220ENST00000461874 A8MXK9 166 aa15.9■□□□□ 0.14
VARS-220ENST00000461874 CYB5R3P00387 301 aaPredicted RBP15.9■□□□□ 0.14
VARS-220ENST00000461874 HLA-DPB1P04440 258 aa15.9■□□□□ 0.14
VARS-220ENST00000461874 PSKH1P11801 424 aa15.9■□□□□ 0.14
VARS-220ENST00000461874 OTX1P32242 354 aaPredicted RBP15.9■□□□□ 0.14
VARS-220ENST00000461874 PMELP40967 661 aa15.9■□□□□ 0.14
VARS-220ENST00000461874 PGAP1Q75T13 922 aa15.9■□□□□ 0.14
VARS-220ENST00000461874 MOGAT3Q86VF5 341 aa15.9■□□□□ 0.14
VARS-220ENST00000461874 OR9Q1Q8NGQ5 310 aa15.9■□□□□ 0.14
VARS-220ENST00000461874 OR4Q3Q8NH05 313 aa15.9■□□□□ 0.14
VARS-220ENST00000461874 NMNAT2Q9BZQ4 307 aa15.9■□□□□ 0.14
VARS-220ENST00000461874 TMEM165Q9HC07 324 aa15.9■□□□□ 0.14
VARS-220ENST00000461874 PRPF19Q9UMS4 504 aaKnown RBP15.9■□□□□ 0.14
VARS-220ENST00000461874 COMMD3-BMI1R4GMX3 469 aa15.9■□□□□ 0.14
VARS-220ENST00000461874 NBEAL1Q6ZS30 2694 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 ZNF205O95201 554 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 SOX14O95416 240 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 FSTL3O95633 263 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 WNT2P09544 360 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 ZNF12P17014 697 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 CPT2P23786 658 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 GATA4P43694 442 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 SLC25A1P53007 311 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 ZNF154Q13106 437 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 MAB21L1Q13394 359 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 CRMP1Q14194 572 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 PCK2Q16822 640 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 ESCO2Q56NI9 601 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 CELF2-AS1Q8N7Q2 184 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 ZNF511Q8NB15 262 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 OR2T33Q8NG76 320 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 SPRYD4Q8WW59 207 aaPredicted RBP15.89■□□□□ 0.13
VARS-220ENST00000461874 ASB9Q96DX5 294 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 JMJD8Q96S16 334 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 SLC6A7Q99884 636 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 SUCNR1Q9BXA5 334 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 ARMC1Q9NVT9 282 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 INSIG2Q9Y5U4 225 aa15.89■□□□□ 0.13
VARS-220ENST00000461874 LRRC30A6NM36 301 aa15.88■□□□□ 0.13
VARS-220ENST00000461874 HAX1O00165 279 aa15.88■□□□□ 0.13
VARS-220ENST00000461874 GYPBP06028 91 aa15.88■□□□□ 0.13
VARS-220ENST00000461874 RAP2AP10114 183 aa15.88■□□□□ 0.13
VARS-220ENST00000461874 SPI1P17947 270 aa15.88■□□□□ 0.13
VARS-220ENST00000461874 FMO3P31513 532 aa15.88■□□□□ 0.13
VARS-220ENST00000461874 ENTPD1P49961 510 aa15.88■□□□□ 0.13
VARS-220ENST00000461874 SNAI3Q3KNW1 292 aa15.88■□□□□ 0.13
VARS-220ENST00000461874 TEX30Q5JUR7 227 aa15.88■□□□□ 0.13
VARS-220ENST00000461874 DRAM2Q6UX65 266 aa15.88■□□□□ 0.13
VARS-220ENST00000461874 CD300LDQ6UXZ3 194 aa15.88■□□□□ 0.13
VARS-220ENST00000461874 MRPL21Q7Z2W9 205 aaKnown RBP15.88■□□□□ 0.13
VARS-220ENST00000461874 DCXRQ7Z4W1 244 aa15.88■□□□□ 0.13
VARS-220ENST00000461874 C1orf87Q8N0U7 546 aa15.88■□□□□ 0.13
VARS-220ENST00000461874 BPIFB2Q8N4F0 458 aa15.88■□□□□ 0.13
VARS-220ENST00000461874 FAM216AQ8WUB2 273 aa15.88■□□□□ 0.13
VARS-220ENST00000461874 DVL3Q92997 716 aaPredicted RBP15.88■□□□□ 0.13
VARS-220ENST00000461874 TAS2R1Q9NYW7 299 aa15.88■□□□□ 0.13
VARS-220ENST00000461874 LRCH1Q9Y2L9 728 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms