RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 HLA-DPB1P04440 258 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 SLC35E2P0CK97 266 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 TRAPPC2P0DI81 140 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 TRAPPC2BP0DI82 140 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 CELP19835 753 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 CFL1P23528 166 aaKnown RBP3.4□□□□□ -1.87
CFHR3-204ENST00000461558 AZGP1P25311 298 aaKnown RBP3.4□□□□□ -1.87
CFHR3-204ENST00000461558 CEACAM8P31997 349 aaPredicted RBP3.4□□□□□ -1.87
CFHR3-204ENST00000461558 GABRA3P34903 492 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 DDOSTP39656 456 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 RBM34P42696 430 aaKnown RBP3.4□□□□□ -1.87
CFHR3-204ENST00000461558 GABRA4P48169 554 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 EVX1P49640 407 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 TMED10P49755 219 aaKnown RBP3.4□□□□□ -1.87
CFHR3-204ENST00000461558 MMP15P51511 669 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 VSX2P58304 361 aaPredicted RBP3.4□□□□□ -1.87
CFHR3-204ENST00000461558 ZNF85Q03923 595 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 CSTF1Q05048 431 aaKnown RBP3.4□□□□□ -1.87
CFHR3-204ENST00000461558 SCN1BQ07699 218 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 FAM53BQ14153 422 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 FZD2Q14332 565 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 INSL4Q14641 139 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 P2RY14Q15391 338 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 ZNF141Q15928 474 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.4□□□□□ -1.87
CFHR3-204ENST00000461558 ATAD3CQ5T2N8 411 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 PDZK1Q5T2W1 519 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 RPL13AP3Q6NVV1 102 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 ZNF544Q6NX49 715 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 PLBD1Q6P4A8 553 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 CNIH2Q6PI25 160 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 FAM131AQ6UXB0 335 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 NPSR1Q6W5P4 371 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 B3GLCTQ6Y288 498 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 RAB43Q86YS6 212 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 C11orf53Q8IXP5 236 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 SLC43A2Q8N370 569 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 ACBD7Q8N6N7 88 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 CSNK1A1LQ8N752 337 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 COX18Q8N8Q8 333 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 SLC37A3Q8NCC5 494 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 DUSP18Q8NEJ0 188 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 ATP6V1C2Q8NEY4 427 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 OR52R1Q8NGF1 315 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 OR51G2Q8NGK0 314 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 OR1J2Q8NGS2 313 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 OR9A4Q8NGU2 314 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 RPLP0P6Q8NHW5 317 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 AP3S1Q92572 193 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 RERGQ96A58 199 aaPredicted RBP3.4□□□□□ -1.87
CFHR3-204ENST00000461558 BPIFA2Q96DR5 249 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 ARSGQ96EG1 525 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 SAT2Q96F10 170 aaPredicted RBP3.4□□□□□ -1.87
CFHR3-204ENST00000461558 ZNF486Q96H40 463 aaPredicted RBP3.4□□□□□ -1.87
CFHR3-204ENST00000461558 DIRAS2Q96HU8 199 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 RNF170Q96K19 258 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 TMEM68Q96MH6 324 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 VSTM2LQ96N03 204 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 ZNF285Q96NJ3 590 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 SECISBP2Q96T21 854 aaKnown RBP3.4□□□□□ -1.87
CFHR3-204ENST00000461558 DDOQ99489 341 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 TEAD3Q99594 435 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 TMED9Q9BVK6 235 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 TEX12Q9BXU0 123 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 GSDMCQ9BYG8 508 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 PPIL3Q9H2H8 161 aaKnown RBP3.4□□□□□ -1.87
CFHR3-204ENST00000461558 C8orf33Q9H7E9 229 aaPredicted RBP3.4□□□□□ -1.87
CFHR3-204ENST00000461558 TBC1D17Q9HA65 648 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 FOLH1BQ9HBA9 442 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 ADGRL4Q9HBW9 690 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 MCCC2Q9HCC0 563 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 FAM60AQ9NP50 221 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 B3GAT2Q9NPZ5 323 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 INPP5EQ9NRR6 644 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 STARD5Q9NSY2 213 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 C14orf105Q9NVL8 296 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 HRASLS2Q9NWW9 162 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 BABAM2Q9NXR7 383 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 HAO2Q9NYQ3 351 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 MRPL15Q9P015 296 aaKnown RBP3.4□□□□□ -1.87
CFHR3-204ENST00000461558 NDRG2Q9UN36 371 aaKnown RBP3.4□□□□□ -1.87
CFHR3-204ENST00000461558 BAIAP2Q9UQB8 552 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 GSTK1Q9Y2Q3 226 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 SLCO1B1Q9Y6L6 691 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 MAU2Q9Y6X3 613 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 SPACA6W5XKT8 324 aa3.4□□□□□ -1.87
CFHR3-204ENST00000461558 TNRC6BQ9UPQ9 1833 aaKnown RBP3.4□□□□□ -1.87
CFHR3-204ENST00000461558 FER1L5A0AVI2 2057 aa3.39□□□□□ -1.87
CFHR3-204ENST00000461558 TRAV27A0A087WT01 109 aa3.39□□□□□ -1.87
CFHR3-204ENST00000461558 C2orf92A0A1B0GVN3 265 aa3.39□□□□□ -1.87
CFHR3-204ENST00000461558 DAPL1A0PJW8 107 aa3.39□□□□□ -1.87
CFHR3-204ENST00000461558 OR5K4A6NMS3 321 aa3.39□□□□□ -1.87
CFHR3-204ENST00000461558 CASKO14936 926 aa3.39□□□□□ -1.87
CFHR3-204ENST00000461558 OGG1O15527 345 aa3.39□□□□□ -1.87
CFHR3-204ENST00000461558 PLPP2O43688 288 aa3.39□□□□□ -1.87
CFHR3-204ENST00000461558 GPR137BO60478 399 aa3.39□□□□□ -1.87
CFHR3-204ENST00000461558 SLC19A2O60779 497 aa3.39□□□□□ -1.87
CFHR3-204ENST00000461558 CTNSO60931 367 aa3.39□□□□□ -1.87
CFHR3-204ENST00000461558 REM1O75628 298 aa3.39□□□□□ -1.87
CFHR3-204ENST00000461558 CCNKO75909 580 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms