RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 MVKQ03426 396 aa17.43■□□□□ 0.38
SCAF8-204ENST00000461219 TMEM255AQ5JRV8 349 aa17.43■□□□□ 0.38
SCAF8-204ENST00000461219 TEX30Q5JUR7 227 aa17.43■□□□□ 0.38
SCAF8-204ENST00000461219 DRAM2Q6UX65 266 aa17.43■□□□□ 0.38
SCAF8-204ENST00000461219 PGAP1Q75T13 922 aa17.43■□□□□ 0.38
SCAF8-204ENST00000461219 CXXC5Q7LFL8 322 aaKnown RBP17.43■□□□□ 0.38
SCAF8-204ENST00000461219 DPY19L4Q7Z388 723 aa17.43■□□□□ 0.38
SCAF8-204ENST00000461219 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.43■□□□□ 0.38
SCAF8-204ENST00000461219 PARP8Q8N3A8 854 aa17.43■□□□□ 0.38
SCAF8-204ENST00000461219 PYDC1Q8WXC3 89 aa17.43■□□□□ 0.38
SCAF8-204ENST00000461219 HPS1Q92902 700 aa17.43■□□□□ 0.38
SCAF8-204ENST00000461219 RAB1CQ92928 201 aa17.43■□□□□ 0.38
SCAF8-204ENST00000461219 DUS3LQ96G46 650 aaKnown RBP17.43■□□□□ 0.38
SCAF8-204ENST00000461219 POM121Q96HA1 1249 aa17.43■□□□□ 0.38
SCAF8-204ENST00000461219 RAB3IPQ96QF0 476 aaPredicted RBP17.43■□□□□ 0.38
SCAF8-204ENST00000461219 KCNJ15Q99712 375 aa17.43■□□□□ 0.38
SCAF8-204ENST00000461219 DDX28Q9NUL7 540 aaKnown RBP17.43■□□□□ 0.38
SCAF8-204ENST00000461219 H2AFY2Q9P0M6 372 aaPredicted RBP17.43■□□□□ 0.38
SCAF8-204ENST00000461219 LILRA1O75019 489 aa17.42■□□□□ 0.38
SCAF8-204ENST00000461219 IGFBP5P24593 272 aa17.42■□□□□ 0.38
SCAF8-204ENST00000461219 RAD23AP54725 363 aa17.42■□□□□ 0.38
SCAF8-204ENST00000461219 CDK5R2Q13319 367 aa17.42■□□□□ 0.38
SCAF8-204ENST00000461219 PTGES3Q15185 160 aaKnown RBP17.42■□□□□ 0.38
SCAF8-204ENST00000461219 AVPI1Q5T686 147 aa17.42■□□□□ 0.38
SCAF8-204ENST00000461219 LCN1P1Q5VSP4 162 aa17.42■□□□□ 0.38
SCAF8-204ENST00000461219 NAA40Q86UY6 237 aa17.42■□□□□ 0.38
SCAF8-204ENST00000461219 OR13G1Q8NGZ3 307 aa17.42■□□□□ 0.38
SCAF8-204ENST00000461219 SPRYD4Q8WW59 207 aaPredicted RBP17.42■□□□□ 0.38
SCAF8-204ENST00000461219 CENPNQ96H22 339 aaPredicted RBP17.42■□□□□ 0.38
SCAF8-204ENST00000461219 SP140LQ9H930 580 aa17.42■□□□□ 0.38
SCAF8-204ENST00000461219 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.42■□□□□ 0.384e-13■■■■□ 20.9
SCAF8-204ENST00000461219 ISPDA4D126 451 aa17.41■□□□□ 0.38
SCAF8-204ENST00000461219 TBX1O43435 398 aa17.41■□□□□ 0.38
SCAF8-204ENST00000461219 LMX1BO60663 402 aa17.41■□□□□ 0.38
SCAF8-204ENST00000461219 APOC1P02654 83 aa17.41■□□□□ 0.38
SCAF8-204ENST00000461219 ANXA2P07355 339 aaKnown RBP17.41■□□□□ 0.38
SCAF8-204ENST00000461219 CD55P08174 381 aa17.41■□□□□ 0.38
SCAF8-204ENST00000461219 ADH4P08319 380 aa17.41■□□□□ 0.38
SCAF8-204ENST00000461219 H2BFMP0C1H6 154 aa17.41■□□□□ 0.38
SCAF8-204ENST00000461219 CDH15P55291 814 aa17.41■□□□□ 0.38
SCAF8-204ENST00000461219 APOFQ13790 326 aa17.41■□□□□ 0.38
SCAF8-204ENST00000461219 KPNB1Q14974 876 aaKnown RBP17.41■□□□□ 0.38
SCAF8-204ENST00000461219 RSPO1Q2MKA7 263 aaPredicted RBP17.41■□□□□ 0.38
SCAF8-204ENST00000461219 SLC35D3Q5M8T2 416 aa17.41■□□□□ 0.38
SCAF8-204ENST00000461219 LINC01590Q5TEZ4 76 aa17.41■□□□□ 0.38
SCAF8-204ENST00000461219 ZFP1Q6P2D0 407 aa17.41■□□□□ 0.38
SCAF8-204ENST00000461219 OR8G5Q8NG78 346 aa17.41■□□□□ 0.38
SCAF8-204ENST00000461219 OR10S1Q8NGN2 331 aa17.41■□□□□ 0.38
SCAF8-204ENST00000461219 THEM6Q8WUY1 208 aa17.41■□□□□ 0.38
SCAF8-204ENST00000461219 MSI2Q96DH6 328 aaKnown RBP17.41■□□□□ 0.38
SCAF8-204ENST00000461219 TOR3AQ9H497 397 aa17.41■□□□□ 0.38
SCAF8-204ENST00000461219 TMEM100Q9NV29 134 aa17.41■□□□□ 0.38
SCAF8-204ENST00000461219 ORC6Q9Y5N6 252 aa17.41■□□□□ 0.38
SCAF8-204ENST00000461219 FN1P02751 2386 aaKnown RBP17.4■□□□□ 0.38
SCAF8-204ENST00000461219 ZFHX3Q15911 3703 aa17.4■□□□□ 0.38
SCAF8-204ENST00000461219 GGT3PA6NGU5 568 aa17.4■□□□□ 0.38
SCAF8-204ENST00000461219 SAC3D1A6NKF1 404 aa17.4■□□□□ 0.38
SCAF8-204ENST00000461219 MITFO75030 526 aaPredicted RBP17.4■□□□□ 0.38
SCAF8-204ENST00000461219 RP2O75695 350 aa17.4■□□□□ 0.38
SCAF8-204ENST00000461219 PSKH1P11801 424 aa17.4■□□□□ 0.38
SCAF8-204ENST00000461219 NAA10P41227 235 aaPredicted RBP17.4■□□□□ 0.38
SCAF8-204ENST00000461219 CX3CR1P49238 355 aa17.4■□□□□ 0.38
SCAF8-204ENST00000461219 ACTR3P61158 418 aa17.4■□□□□ 0.38
SCAF8-204ENST00000461219 GK2Q14410 553 aaPredicted RBP17.4■□□□□ 0.38
SCAF8-204ENST00000461219 PCK2Q16822 640 aa17.4■□□□□ 0.38
SCAF8-204ENST00000461219 KRTAP27-1Q3LI81 207 aa17.4■□□□□ 0.38
SCAF8-204ENST00000461219 CHRFAM7AQ494W8 412 aa17.4■□□□□ 0.38
SCAF8-204ENST00000461219 LINC01356Q8N9X3 169 aa17.4■□□□□ 0.38
SCAF8-204ENST00000461219 CLDND2Q8NHS1 167 aa17.4■□□□□ 0.38
SCAF8-204ENST00000461219 ITLN1Q8WWA0 313 aa17.4■□□□□ 0.38
SCAF8-204ENST00000461219 ABHD6Q9BV23 337 aa17.4■□□□□ 0.38
SCAF8-204ENST00000461219 SHARPINQ9H0F6 387 aa17.4■□□□□ 0.38
SCAF8-204ENST00000461219 GABARAPL1Q9H0R8 117 aa17.4■□□□□ 0.38
SCAF8-204ENST00000461219 IL19Q9UHD0 177 aa17.4■□□□□ 0.38
SCAF8-204ENST00000461219 OAZ3Q9UMX2 235 aa17.4■□□□□ 0.38
SCAF8-204ENST00000461219 CACNG2Q9Y698 323 aa17.4■□□□□ 0.38
SCAF8-204ENST00000461219 SONP18583 2426 aaKnown RBP17.4■□□□□ 0.38
SCAF8-204ENST00000461219 IQCF6A8MYZ5 107 aa17.39■□□□□ 0.37
SCAF8-204ENST00000461219 SELENOFO60613 162 aa17.39■□□□□ 0.37
SCAF8-204ENST00000461219 CRLF1O75462 422 aa17.39■□□□□ 0.37
SCAF8-204ENST00000461219 LYNP07948 512 aa17.39■□□□□ 0.37
SCAF8-204ENST00000461219 SLC2A1P11166 492 aa17.39■□□□□ 0.37
SCAF8-204ENST00000461219 HNF1AP20823 631 aa17.39■□□□□ 0.37
SCAF8-204ENST00000461219 IL2RGP31785 369 aa17.39■□□□□ 0.37
SCAF8-204ENST00000461219 SRP9P49458 86 aaKnown RBP17.39■□□□□ 0.37
SCAF8-204ENST00000461219 TIGD6Q17RP2 521 aa17.39■□□□□ 0.37
SCAF8-204ENST00000461219 Q6ZR03 302 aa17.39■□□□□ 0.37
SCAF8-204ENST00000461219 COLCA1Q6ZS62 124 aa17.39■□□□□ 0.37
SCAF8-204ENST00000461219 ZNF454Q8N9F8 522 aa17.39■□□□□ 0.37
SCAF8-204ENST00000461219 BBS1Q8NFJ9 593 aa17.39■□□□□ 0.37
SCAF8-204ENST00000461219 OR10AD1Q8NGE0 317 aa17.39■□□□□ 0.37
SCAF8-204ENST00000461219 ST7LQ8TDW4 575 aa17.39■□□□□ 0.37
SCAF8-204ENST00000461219 RAB39BQ96DA2 213 aa17.39■□□□□ 0.37
SCAF8-204ENST00000461219 OR2V2Q96R30 315 aa17.39■□□□□ 0.37
SCAF8-204ENST00000461219 BEX2Q9BXY8 128 aa17.39■□□□□ 0.37
SCAF8-204ENST00000461219 RIBC2Q9H4K1 309 aa17.39■□□□□ 0.37
SCAF8-204ENST00000461219 DNAJC27Q9NZQ0 273 aa17.39■□□□□ 0.37
SCAF8-204ENST00000461219 LAMP5Q9UJQ1 280 aa17.39■□□□□ 0.37
SCAF8-204ENST00000461219 PPP1R3CQ9UQK1 317 aa17.39■□□□□ 0.37
SCAF8-204ENST00000461219 NOP16Q9Y3C1 178 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms